Dneo007176.1
Basic Information
- Insect
- Drosophila neoperkinsi
- Gene Symbol
- Mblk-1
- Assembly
- GCA_037043555.1
- Location
- JBAMBG010004490.1:11561-22454[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9e-10 3.8e-07 29.7 0.0 2 44 307 350 306 351 0.88 2 3 3.1 6.1e+03 -3.0 0.5 1 11 444 454 444 455 0.89 3 3 8.8e-19 1.8e-15 56.4 0.0 1 43 815 858 815 860 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGTTCAACCCATTGAATATCGCCGAGCAACAGCCCATATCTACAACAGAAGACAGCATCTATCAGAAGCCACTGAACCACCGTTTAGCGCAGCCCAACGGCCAAcattgcaacaataacaataacaacggcGCACTGCAATTTGAAAGAGATTTTGAGAAGAACCACACATCACACGACCACGACTCAAGTGGAACATCACGTAGCAGCTCCGGCTCACCATCACCACCGTCAGAACCCAACGATTGGACACCGTTTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGTTAACGGTGAACGCCAAAGGCGAATTGGTGGTCGAAACAACGGCAACCGCGTCTAGCCTTAAttgtagcagcaacaacaacaacaccaacggcATAGCTGAGCAGCAGcacgacagcgacagcagctcAAGCGCATCACTGCACAATAGTAGCagaaataccaacaacaacaacaacagcaacagttgcaacaagcATAGAGTACGCAACGCCGCAAACAACGCTACAACATCGTCATCAGCAAGTACAATAGATCTTCAAAAGCTGCTCACCCAGCAAGCAGCAGAAATGACATCGATGGAATCAATGGCCGCCAAGCTGGCACAGTTCTCAATGATGGCCGATTTTAATCTGATGAGCACGCTGGCCAATCAACAACATGCTAACTCGGTAACACCAACTACCTCTGAAGTATCGGCCGCCGCCGCAAGTCCCGCACTCAAAGATACGCACAGTCCCAGTGCGGATGCGCCCCTGGATCTAAGCAGCAAACCATCGCCAAATTCATCGATTAGCGGCGATATAAAGACAGCCAGAGCTCTGTCTGactgtgccacgcccatttcAGCAGCACGACACAACTACAGTCACGAGGATCTGAACAGTGCGCTGCAGGATGTGCTGGTCAATAAACTGGGTACCCGCAAAGCAGCCAAGGAGTATCAAGTGCCGCGCTCCGCGCTGCGCAACAAGCTGTGCAAAATGTCCTTGGATGCGAAACGGCCGAATGCGCAAGCGACGCCAGagctgcagcatcagcagcagcaacagcgataTCTGGACGAGCCGGACGAGTCCGAGGAGGAAgctggtgatggtgatggcgACAGCAATGCCTCAACGCCAGCGCTGGGCTTTCAGGAACTTGCCCAACGTATTGTGTCCACCGAGCATCTGCACAAGCTGAACACCATGTCCGAGCACAATGGCAGCGAACTGGGCGACGATCTCGATCCCGTTCTGTCGCCAAAGTCGTCGCGGACGCCACAGAGAGACGGCACTCCAACGGATATGCaagctgcagcggcagcagcagcagcagcagcagcagctggtggtACCAATGCCACCGGACTGCCTATGCCCATCGATCCAAACGTTCTGTTGAATACGCTGTTCCTTGCTGCCGGCTTTGGTGTTATACCCAAGCTGGACGAGACGCAGACGCTGGGTGATCTGCTCAAATCGCTGCTAATGGCCAAAAGTAGCGGCATGATTAATGAGGCGGTGGTTAATGCTGCTGCATCCGGGCACGAGAGCAATGGCAGTGCCTCACTGCTCGATCAGTGccggctgcaacagcaacagcaacaacagttgcagcatcTAAATGCAGTTGCCGCCTATCGCCGTCATCTACCAAAGTCTGAAACGCCTGAGACGAGCTCCTCCCTGGATGCCAATGAGGCGTGTGAGGATCCCATACTGAAGATTCCGTCCTTCAAGATCAGCGGCGCACCGAGCGTCTCACCCACGTTgcgctgcaacaacagcagcagcagcagcatgaacaacaacaacaacaatagcaacaataacaacagctcAACAactcacagcagcagcaaccgcaacgGTGGCGGCGATCATAGTCCACATTCTGCCTCACCaatgctggcagcagcagttgctgccgcAGCGGCCAGCAACAGTTACAGgcaaagcggcagcagcaacagcgggaATAATCTGTTGTCCCCATCGCCGACATCAATACAGAAGATGATGGCCAACACCATACAGCGCAAGATCAACGAACAGAGTAGCCAGGATAGTCTgcgcaacaatggcaacaccAGCGGCAGCGAATGTAGCAGCAGTGGAGGCGGTGGTAACAGCAGCGCGAGCAGGAAGCCAAGCATATCGGTGGCCAAAATGATTGGCGGCACAGACACCTCACGCTTTGGCGCCTCACCTAATCTGCTCGCGCAGCAACATCACAGCCATCTGCCACCCGCACATCATgcccaccagcagcagcatacgcatacgcatacgcatacacatccgcatccgcattcacatcagcatcagcagctcaGTGCCCAGGATGCGGCGGCGTTGGCAGCTGGCAAGGGGACGCGACCGAAGCGTGGTAAGTACCGCAACTACGACAGGGACAGCCTGGTCGAGGCAGTCAAGGCCGTGCAGCGGGGTGAGATGTCTGTGCATCGTGCCGGTAGCTATTATGGTGTGCCGCACTCAACGCTGGAGTACAAAGTGAAGGAGCGACATTTGATGCGACCGCGCAAGCGGGAGCCCAAACCGCAACCGGATCTCGTGGGGCTGACGGGGGCAGCGAATAAGATTAGTTTGACTGCACTCAATAATCTAGACAAACTAAAgtctgccagcagcagcagcaatgccacCAGCAGTTCCGGCTCCAAGCTAAGCAATGCACTAaagagcagcagtagcagtgcGGCAAGTGCAGCGGCGTCGGTGCCCAATGGCATTAAGCTGCCCATATATGATGCAGCACCGCAGCTGTCCTTTCAGCCGAACATGTTCTGGCCACAGACGAATGCCGGCGCCAACTATGCTCTGGACTTCAATCGCAATCCCGAATTCATCAAGTCACATCTGGCCGAGGTGATGCGCAATAGTCAACTGGGCGTGGCTAGCAATCATCATGGTCATGGTGGCGGGCATATGAAAAGTGCTCTGGAGTTTGCCGAGAACATGTACGATGGCATCATCAGGAAGACGCTGAAGAACGATGGCGATGTGAGCACCggcggcaatggcaatgcaCTGCTGGATCAGCTGCTGGTAAAGAAGACGCCACTGCCGTTCACCAATAACCGCAGCAATGACTACCTCGGTGCAGCCTGTTCCACCTCCGAGAGCAATAAACGTGCCGGCAGTCCGATGGGCGCCTATACGGATATTAAACGTGAGCGTCTCAGTCCCACGCGCAGTGCGGATAGTGCTAGCAGTGATGACGATCATGAGcattccaacaacaacaataacaataacagcgacCTGGcgcacaacaagaacaacaagagcagcaacagcaacaacaacggcagtagcagcaacaatggaAATGGCCGCAGCCGGATGACATCACGCGACTCGGAAACGGACGCCAGTAGCCTGAAGAGCGAACATTCGCGCAGCTCCTCGGCGGCAGCACAACTCGCCaatgcaagcagcagcaaaaacaaaatgatggatctcaatggcagcaacagtgTCAAATTCGAGTCGgagcagcaagcagcgcaGATCTCGCCCAGTAACTCCATATTGCACGAAAAGCTGGCGAAGATCAAGGCCGAGCAGTCCGATGTGCATTCGGCCACCACCGAGGAGCAGTTATAG
- Protein Sequence
- MGRRKWKHYQDQLTFNPLNIAEQQPISTTEDSIYQKPLNHRLAQPNGQHCNNNNNNGALQFERDFEKNHTSHDHDSSGTSRSSSGSPSPPSEPNDWTPFDKCNFCVNGRLLTVNAKGELVVETTATASSLNCSSNNNNTNGIAEQQHDSDSSSSASLHNSSRNTNNNNNSNSCNKHRVRNAANNATTSSSASTIDLQKLLTQQAAEMTSMESMAAKLAQFSMMADFNLMSTLANQQHANSVTPTTSEVSAAAASPALKDTHSPSADAPLDLSSKPSPNSSISGDIKTARALSDCATPISAARHNYSHEDLNSALQDVLVNKLGTRKAAKEYQVPRSALRNKLCKMSLDAKRPNAQATPELQHQQQQQRYLDEPDESEEEAGDGDGDSNASTPALGFQELAQRIVSTEHLHKLNTMSEHNGSELGDDLDPVLSPKSSRTPQRDGTPTDMQAAAAAAAAAAAAGGTNATGLPMPIDPNVLLNTLFLAAGFGVIPKLDETQTLGDLLKSLLMAKSSGMINEAVVNAAASGHESNGSASLLDQCRLQQQQQQQLQHLNAVAAYRRHLPKSETPETSSSLDANEACEDPILKIPSFKISGAPSVSPTLRCNNSSSSSMNNNNNNSNNNNSSTTHSSSNRNGGGDHSPHSASPMLAAAVAAAAASNSYRQSGSSNSGNNLLSPSPTSIQKMMANTIQRKINEQSSQDSLRNNGNTSGSECSSSGGGGNSSASRKPSISVAKMIGGTDTSRFGASPNLLAQQHHSHLPPAHHAHQQQHTHTHTHTHPHPHSHQHQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKISLTALNNLDKLKSASSSSNATSSSGSKLSNALKSSSSSAASAAASVPNGIKLPIYDAAPQLSFQPNMFWPQTNAGANYALDFNRNPEFIKSHLAEVMRNSQLGVASNHHGHGGGHMKSALEFAENMYDGIIRKTLKNDGDVSTGGNGNALLDQLLVKKTPLPFTNNRSNDYLGAACSTSESNKRAGSPMGAYTDIKRERLSPTRSADSASSDDDHEHSNNNNNNNSDLAHNKNNKSSNSNNNGSSSNNGNGRSRMTSRDSETDASSLKSEHSRSSSAAAQLANASSSKNKMMDLNGSNSVKFESEQQAAQISPSNSILHEKLAKIKAEQSDVHSATTEEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00595868;
- 90% Identity
- iTF_00548726;
- 80% Identity
- -