Dmel003279.1
Basic Information
- Insect
- Drosophila melanocephala
- Gene Symbol
- Mblk-1
- Assembly
- GCA_037043625.1
- Location
- JBAMBD010000070.1:977587-988628[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.4e-10 3.7e-07 29.7 0.0 2 44 310 353 309 354 0.88 2 3 4.3 6.6e+03 -3.2 0.8 1 11 447 457 447 459 0.88 3 3 1.1e-18 1.7e-15 56.4 0.0 1 43 819 862 819 864 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGTTCAACCCATTGAATATCGCCGAGCAACAGCCCATATCTACAACAGAAGACAGCATCTATCAGAAGCCACTGAACCACCGTTTAGCGCAGCCCAACGGCCAAcattgcaacaataacaataacaacggcGCACTGCAATTTGAAAGAGATTTTGAGAAGAACCACACATCACACGACCACGACTCAAGTGGAACATCACGTAGCAGCTCCGGCTCACCATCACCACCGTCAGAACCCAACGATTGGACACCGTTTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGTTAACGGTGAACGCCAAAGGCGAATTGGTGGTCGAAACAACGGCAACCGCGTCTAGCCTTAAttgtagcagcaacaacaacaacaacaacaacggcacaGCTGAGCAGCAGcacgacagcgacagcagctcAAGCGCATCACTGCACAATAGTAGCagaaataccaacaacaacaacaacaacaacagcaacagttgcaacaagcATAGAGTACGCAACGCCGCAAACAACGCTACAACATCGTCATCAGCAAGTACAATAGAACTTCAAAAGCTGCTCACCCAGCAAGCAGCAGAAATGACATCGATGGAATCAATGGCCGCCAAGCTGGCACAGTTCTCAATGATGGCCGATTTTAATCTGATGAGCACGCTGGCCAATCAACAACATGCTAACTCGGTAACACCAACTACCTCTGAAGTatctgccgccgccgccagtcCCGCACTCAAAGATACGCACAGTCCCAGTGCGGATGCGCCCCTGGATCTAAGCAGCAAACCATCGCCAAATTCATCGATTAGCGGCGATATAAAGACAGCCAGAGCTCTGTCTGactgtgccacgcccatttcAGCAGCACGACACAACTACAGTCACGAGGATCTGAACAGTGCGCTGCAGGATGTGCTGGTCAATAAACTGGGTACCCGCAAAGCAGCCAAGGAGTATCAAGTGCCGCGCTCCGCGCTGCGTAACAAGCTGTGCAAAATGTCCTTGGATGCGAAACGACCGAATGCGCAAGCGACGCcagagctgcagcagcagcagcagcaacagcgataTCTGGACGAGCAGGACGAGTCCGAGGAGGAAgctggtgatggtgatggcgaCAGCAATGCCTCAACGCCAGCGCTGGGCTTTCAGGAACTTGCCCAACGTATTGTGTCCACCGAACATCTGCACAAGCTGAACACCATGTCCGAGCACAATGGCAGCGAACTGGGCGACGATCTCGATCCCGTTCTGTCGCCAAAGTCGTCGCGGACGCCACAGAGAGACGGCACTCCAACGGATATGCaagctgcagcggcagcagcagcagcagcagccgctggtGGCACCAATGCCACCGGACTGCCTATGCCCATCGATCCAAACGTTCTGTTGAATACGCTGTTCCTGGCTGCCGGCTTTGGTGTTATACCCAAGCTGGACGAGACGCAGACGCTGGGTGATCTGCTCAAATCGCTGCTAATGGCCAAAAGTAGCGGCATGATTAATGAGGCGGTGGTTAATGCTGCTGCATCCGGGCACGAGAGCAATGGCAGTGCCTCACTGCTCGATCAGTGccggctgcaacagcaacagcaacaacagttgcagcatcTAAATGCAGTTGCCGCCTATCGCCGTCATCTACCAAAGTCTGAAACGCCTGAGACGAGCTCCTCGCTGGATGCCAATGAGGCGTGTGAGGATCCCATACTGAAGATTCCGTCCTTCAAGATCAGCGGCGCACCGAGCGTCTCACCCACGCTgcgctgcaacaacagcagcagcagcagcatgaacaacaacaacaacaatagcaacaataacaacagctcAACAactcacagcagcagcaaccgcaacgGTGGCGGCGATCATAGTCCACATTCTGCCTCACCaatgctggcagcagcagttgctgccgcAGCGGCCAGCAACAGTTACAGgcaaagcggcagcagcaacagcgggaATAATCTGTTGTCGCCATCGCCGACATCAATACAGAAGATGATGGCCAACACCATACAGCGCAAGATCAACGAACAGAGTAGCCAGGATAGTCTgcgcaacaatggcaacaccAGCGGCAGcgaatgcagcagcagtggagGCGGTGGTAACAGCAGCGCGAGCAGGAAGCCAAGCATATCGGTGGCCAAAATGATTGGCGGCACAGACACCTCACGCTTTGGCGCCTCACCTAATCTGCTCGCGCAGCAACATCACAGCCATCTGCCACCCGCACATCATgcccaccagcagcagcatacgcatacgcatacgcatacacatccgcatccgcattcgcattcacatcagcatcagcagctcaGTGCCCAGGATGCGGCGGCGTTGGCAGCTGGCAAGGGGACGCGACCGAAGCGTGGTAAGTACCGCAACTACGACAGGGACAGCCTGGTCGAGGCAGTCAAGGCCGTGCAGCGGGGTGAGATGTCTGTGCATCGTGCCGGTAGCTATTATGGTGTGCCGCACTCAACGCTGGAGTACAAAGTGAAGGAGCGACATTTGATGCGACCGCGCAAGCGGGAGCCCAAACCGCAACCGGATCTCGTAGGGCTAACGGGGGCAGCGAATAAGATTAGTTTGACTGCACTCAATAATCTAGACAAACTAAAgtctgccagcagcagcagcaatgccacCAGCAGTTCCGGCTCCAAGCTAAGCAATGCACTAaagagcagcagtagcagtgcGGCAAGTGCAGCGGCGTCGGTGCCCAATGGCATTAAGCTGCCCATATATGATGCAGCACCGCAGCTGTCCTTTCAGCCGAACATGTTCTGGCCACAGACGAATGCCGGCGCCAACTATGCTCTGGACTTCAATCGCAATCCCGAATTCATCAAGTCACATCTGGCCGAGGTGATGCGCAATAGTCAACTGGGCGTGGCTAGCAATCATCATGGTCATGGTGGCGGGCATATGAAAAGTGCTCTGGAGTTTGCCGAGAACATGTACGATGGCATCATCCGGAAGACGCTGAAGAACGATGGCGATGTGAGCACCggcggcaatggcaatgcaCTGCTGGATCAGCTGCTGGTAAAGAAGACGCCACTGCCGTTCACCAATAACCGCAGCAATGACTACCTCGGTGCAGCCTGTTCCACCTCCGAGAGCAATAAACGTGCCGGCAGTCCGATGGGCGCCTATACGGATATTAAACGTGAGCGTCTCAGTCCCACGCGCAGTGCGGATAGTGCTAGCAGCGATGACGATCATGAGcattccaacaacaacaataacaataacagcgacCTGGcgcacaacaagaacaacaagagcagcaacagcaacaacaacggcagtagcagcaacaatggaaATGGCCGCAGCCGGATGACATCACGCGACTCGGAAACGGACGCCAGTAGCCTGAAGAGCGAACATTCGCGCAGCTCCTCGGCGGCAGCACAACTCGCCaatgcaagcagcagcaaaaacaaaatgatggatctcaatggcagcaacagtgTCAAATTCGAGTCggagcagcaagcagcgcaGATCTCGCCCAGTAACTCCATATTGCACGAAAAGCTGGCGAAGATCAAGGCCGAGCAGTCCGATcagcaacagcaacagcagcagcaacagcaactggtgGCACCAACATTTGTGTGGCCACCGCTGGCCACACACTACTATAGCTTCTAG
- Protein Sequence
- MGRRKWKHYQDQLTFNPLNIAEQQPISTTEDSIYQKPLNHRLAQPNGQHCNNNNNNGALQFERDFEKNHTSHDHDSSGTSRSSSGSPSPPSEPNDWTPFDKCNFCVNGRLLTVNAKGELVVETTATASSLNCSSNNNNNNNGTAEQQHDSDSSSSASLHNSSRNTNNNNNNNSNSCNKHRVRNAANNATTSSSASTIELQKLLTQQAAEMTSMESMAAKLAQFSMMADFNLMSTLANQQHANSVTPTTSEVSAAAASPALKDTHSPSADAPLDLSSKPSPNSSISGDIKTARALSDCATPISAARHNYSHEDLNSALQDVLVNKLGTRKAAKEYQVPRSALRNKLCKMSLDAKRPNAQATPELQQQQQQQRYLDEQDESEEEAGDGDGDSNASTPALGFQELAQRIVSTEHLHKLNTMSEHNGSELGDDLDPVLSPKSSRTPQRDGTPTDMQAAAAAAAAAAAGGTNATGLPMPIDPNVLLNTLFLAAGFGVIPKLDETQTLGDLLKSLLMAKSSGMINEAVVNAAASGHESNGSASLLDQCRLQQQQQQQLQHLNAVAAYRRHLPKSETPETSSSLDANEACEDPILKIPSFKISGAPSVSPTLRCNNSSSSSMNNNNNNSNNNNSSTTHSSSNRNGGGDHSPHSASPMLAAAVAAAAASNSYRQSGSSNSGNNLLSPSPTSIQKMMANTIQRKINEQSSQDSLRNNGNTSGSECSSSGGGGNSSASRKPSISVAKMIGGTDTSRFGASPNLLAQQHHSHLPPAHHAHQQQHTHTHTHTHPHPHSHSHQHQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKISLTALNNLDKLKSASSSSNATSSSGSKLSNALKSSSSSAASAAASVPNGIKLPIYDAAPQLSFQPNMFWPQTNAGANYALDFNRNPEFIKSHLAEVMRNSQLGVASNHHGHGGGHMKSALEFAENMYDGIIRKTLKNDGDVSTGGNGNALLDQLLVKKTPLPFTNNRSNDYLGAACSTSESNKRAGSPMGAYTDIKRERLSPTRSADSASSDDDHEHSNNNNNNNSDLAHNKNNKSSNSNNNGSSSNNGNGRSRMTSRDSETDASSLKSEHSRSSSAAAQLANASSSKNKMMDLNGSNSVKFESEQQAAQISPSNSILHEKLAKIKAEQSDQQQQQQQQQQLVAPTFVWPPLATHYYSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00595868;
- 90% Identity
- iTF_00548726;
- 80% Identity
- -