Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_035043025.1
Location
JAWNNF010000025.1:1687417-1698289[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.4e-10 4.6e-07 29.3 0.0 2 44 317 360 316 361 0.88
2 3 2.4 3.3e+03 -2.2 0.3 1 11 453 463 453 470 0.84
3 3 1.2e-18 1.6e-15 56.4 0.0 1 43 817 860 817 862 0.95

Sequence Information

Coding Sequence
ATGGGTCCCAGGAAATGGAAACATTATCAAGATCAACTGACGTTCAACCCATTGAATATCGCCGAGCAACAGCCCATATCTACAACAGAAGACAGCATCTATCAAAAGCCACTGAACCACCGTTTAGCGCAGCCCAACGGCCAAcattgcaacaataacaataacaacggcGCACTGCAATTTGAAAGAGATTTTGAGAAGAACCACACATCACACGACCACGACTCAAGTGGATCACACGACCACGACTCACGTAGTAGCTCCGGCTCACCATCACCACCGTCAGAACCCAACGATTGGACACCGTTTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGTTAACGGTGAACGCCAAAGGCGAATTGGTGGTCGAAACAACGGCAACCGCGTCTAGCCTTAattgtagcagcaacagcaacagcaacaacaacaacaacaacggcacaGCTGAGCAGCAGcacgacagcgacagcagctcaAGCGCATCACTGCACAATAGTAGCagaaataccaacaacaacaacaacagtaacagcaacagttgcaacaagcATAGAGTACGCAACGCCGCAAACAACGCTACAACATCGTCATCAGCAAGTACAATAGAACTTCAGAAGCTGCTCACCCAGCAAGCAGCAGAAATGACATCGATGGAATCAATGGCTGCCAAGCTGGCACAGTTCTCAATGATGGCCGATTTCAATCTGATGAGCACGCTGGCCAATCAACAACATACTAGCTCGGTAACACCAACTACCTCTGAAGTatctgccgccgccgccagtcCCGCACTCAAAGATACGCCCAGTCCCAGTGCGGATGCGCCTCTGGATCTAAGCAGCAAACCATCGCCAAATTCATCGATTAGCGGCGATATAAAGACAGCCAGAGCTCTGTCTGactgtgccacgcccatttcAGCAGCACGACACAGCTACAGTCACGAGGATCTGAACAGTGCGCTGCAGGATGTGCTGGTCAATAAACTGGGTACCCGCAAAGCAGCCAAGGAGTATCATGTGCCTCGCTCCGCGCTGCGCAACAAGCTGTGCAAAATGTCCTTGGATGCGAAACGACCGAATGCGCAAGCGACGCcagagctgcagcagcagcagcagcagcgctatCTAGGCGAGCAGGACGAGTCCGAAGAGGAGgctggtgatggtgatggcgACAGCAATGCCTCAACGCCAGCGCTGGGCTATCAGGAAATTGCCCAACGTATTGTGTCCACCGAGCATCTGCACAAGCTGAGCGCCATGTCCGAGCACAATGGCAGCGAACTGGGCGACGATCTCGATCCCGTTCTGTCGCCAAAGTCGTCGCGGACGCCACAGAGAGACGGCACTCCAACGGATATGCaagctgcagcggcagcagcagcagcagccggtgGTGGCACCAATGCCACCGGAATGCCAATACCCATCGATCCCACTGTTCTGTTGAATACGCTGTTACTGGCTGCCGGCTTTGGTGTTATACCCAAGCTGGACGAGACGCAGACGCTGGGTGATCTGCTCAAATCGCTGCTAATGGCCAAAAGTGGCGGCATGATTAATGAGGCGGTGGTTAATGCTGCTGCATCTGGACACGAGAGCAATGGCAGTGCCTCACTGCTCGATCAGTGccggctgcaacagcaacagcaacaacagttgcaggaTCTGAATGCAGTTGCCGCCTATCGCCGTCATCTACCAAAGTCTGAAACGCCTGAGACGAGCTCCTCGCTGGATGCCAATGAGGCGTGTGAGGATCCCATACTGAAGATTCCGTCCTTCAAGATCAGCGGCGCACCGAGCGTCTCACCTACGTTgcgctgcaacaacagcagcagcagcagcatgaacaacaacaacaacaatagcaacaataacaacaactcaacaacacacagcagcagcaaccgcaacggTGGCGATCATAGCCCACATTCTGCCTCACCaatgctggcagcagcagttgctgccgcAGCGGCCAGCAACAGTTACAGGCatagcggcagcagcaacgccggCAACAATCTGTTGTCGCCATCGCCGACATCAATACAGAAGATGATGGCCAACACCATACAGCGCAAGATCAACGAGCAGAGTAGCCAGGATAGTCTacgcaacaatggcaacaccAGCGGCAGtgaatgcagcagcagtggagGCGGTGGTAACAGCAGCGCGAGCAGGAAGCCAAGCATATCGGTGGCCAAAATGATTGGCGGCACAGACACCTCACACTTTGGCGCCTCACCTAATCTGCTCGCGCAGCAACATCACAGCCATCTGCCACCCGCACATCATgcccaccagcagcagcatacgcatacgcatccgcattcgcattcacatcagcatcagcagctcaGTGCACAGGATGCGGCGGCGTTGGCAGCTGGCAAGGGGACGCGACCGAAGCGTGGTAAGTACCGCAACTACGACAGGGACAGCCTGGTCGAGGCAGTCAAGGCCGTGCAGCGGGGTGAGATGTCTGTGCATCGTGCCGGTAGCTATTATGGTGTGCCGCACTCAACGCTGGAGTACAAAGTGAAGGAGCGACATTTGATGCGACCGCGCAAGCGGGAGCCCAAACCGCAACCGGATCTCGTGGGGCTGACGGGGGCAGCGAATAAGATTAGTTTGACTGCACTCAATAATCTAGACAAACTCAAgtctgccagcagcagcagcagcaatgccacCAGCAGTTCCGGCTCCAAGCTAAGCAATGCACTAaagagcagcagtagcagtgcGGCAAGTGCAGCGGCATCGGTGCCCAATGGCATTAAGCTACCCATATATGATGCAGCACCGCAGCTGTCCTTTCAGCCGAACATGTTCTGGGCACAAACGAATGCCGGCGCCAACTATGCCCTGGACTTCAATCGCAATCCCGAATTCCTCAAGTCACATCTGGCAGAGGTGATGCGCAACAGTCAACTGGGCGTGGCTAGCAATCATCATGGTCATGGTGGCGGGCATATGAAAAGTGCTCTTGACTTTGCCGAGAACATGTACGACGGCATCATCCGGAAGACGCTGAAGAACGATGGCGATGTGAGCAccagtggcaatggcaatgcacTGCTAGATCAGCTGCTGGTAAAGAAGACGCCACTGCCGTTCACCAATAACCGCAGCAATGACTACCTCGGCGCCGCCTGTTCCACCTCCGAGAGCAACAAACGTGCCGGCAGTCCGATGGGCGCCTATACGGATATTAAACGTGAGCGTCTCAGTCCCATGCGCAGTGCGGATAGTGCTAGCAGTGATGACGATCTTGAGcattccaacaacaacaataacaataacagcgacCTGGcgcacaacaagaacaacaagagcagcagcaacaacaacaacaacggcagtagcagcaacaatggaaATGGCCGCAGCCGGATGACATCACGCGACTCGGAAACGGACGCCAGTAGCCTGAAGAGCGAACATTCGCACAGCTCCTCGGCGGCAGCACAACTCGCCAatgcaagcagcaacaaaaacaaaatgatggatctcaatggcagcaacagtgTCAAATTCGAGTCggagcagcaagcagcgcagATCTCGCCCAGTAACTCCATATTGCACGAAAAGCTGGCGAAGATCAAGGCCGAGCAATCCGAAGTGCATTCGGCCACCACCGAGGAGCAGTTATAG
Protein Sequence
MGPRKWKHYQDQLTFNPLNIAEQQPISTTEDSIYQKPLNHRLAQPNGQHCNNNNNNGALQFERDFEKNHTSHDHDSSGSHDHDSRSSSGSPSPPSEPNDWTPFDKCNFCVNGRLLTVNAKGELVVETTATASSLNCSSNSNSNNNNNNGTAEQQHDSDSSSSASLHNSSRNTNNNNNSNSNSCNKHRVRNAANNATTSSSASTIELQKLLTQQAAEMTSMESMAAKLAQFSMMADFNLMSTLANQQHTSSVTPTTSEVSAAAASPALKDTPSPSADAPLDLSSKPSPNSSISGDIKTARALSDCATPISAARHSYSHEDLNSALQDVLVNKLGTRKAAKEYHVPRSALRNKLCKMSLDAKRPNAQATPELQQQQQQRYLGEQDESEEEAGDGDGDSNASTPALGYQEIAQRIVSTEHLHKLSAMSEHNGSELGDDLDPVLSPKSSRTPQRDGTPTDMQAAAAAAAAAGGGTNATGMPIPIDPTVLLNTLLLAAGFGVIPKLDETQTLGDLLKSLLMAKSGGMINEAVVNAAASGHESNGSASLLDQCRLQQQQQQQLQDLNAVAAYRRHLPKSETPETSSSLDANEACEDPILKIPSFKISGAPSVSPTLRCNNSSSSSMNNNNNNSNNNNNSTTHSSSNRNGGDHSPHSASPMLAAAVAAAAASNSYRHSGSSNAGNNLLSPSPTSIQKMMANTIQRKINEQSSQDSLRNNGNTSGSECSSSGGGGNSSASRKPSISVAKMIGGTDTSHFGASPNLLAQQHHSHLPPAHHAHQQQHTHTHPHSHSHQHQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKISLTALNNLDKLKSASSSSSNATSSSGSKLSNALKSSSSSAASAAASVPNGIKLPIYDAAPQLSFQPNMFWAQTNAGANYALDFNRNPEFLKSHLAEVMRNSQLGVASNHHGHGGGHMKSALDFAENMYDGIIRKTLKNDGDVSTSGNGNALLDQLLVKKTPLPFTNNRSNDYLGAACSTSESNKRAGSPMGAYTDIKRERLSPMRSADSASSDDDLEHSNNNNNNNSDLAHNKNNKSSSNNNNNGSSSNNGNGRSRMTSRDSETDASSLKSEHSHSSSAAAQLANASSNKNKMMDLNGSNSVKFESEQQAAQISPSNSILHEKLAKIKAEQSEVHSATTEEQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00595868;
90% Identity
iTF_00548726;
80% Identity
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