Dmim005901.1
Basic Information
- Insect
- Drosophila mimetica
- Gene Symbol
- Lztr1_1
- Assembly
- GCA_037075245.1
- Location
- JBAMCH010000005.1:26678269-26681540[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.2e-05 0.0057 16.9 0.0 3 48 582 628 580 639 0.79 2 4 7.3e-08 1.9e-05 25.0 0.0 51 108 658 722 643 724 0.85 3 4 0.89 2.3e+02 2.1 0.1 78 109 724 755 722 756 0.89 4 4 9.8e-20 2.5e-17 63.2 0.0 8 104 815 913 809 919 0.85
Sequence Information
- Coding Sequence
- ATGCTAAAGTCGATTAGCGGAGGCGTTGGCGTGGCATCCACGGAaagaggcggcggcggaggaggcggtggcgcaGGAGGGtcaggcggaggaggaggaggggcagGTGGAAGCGCCTCTGGAAGCAGGAGCACCAGCGGGAGTGGGCGTGCCAATTGTGGGCTGGGCTCCAGTTCGATTTCCAGTGGGTTGAGTGCGGTGTGCGGATTTGTGaccggcggcggaggaggaggagcagctgacCGGGACAGGGACAGGGATAGAGAGAGAGCAGTAGCcaacagcagtggcagcagtgGGAGCACTCCGGCCGGCATCCTTTATTGCCCCGCCTGTGTGGCAGCTTCCAATCAGCAGAATCCCAGCCAGAATTCGAGTCCCCAGCACGAGGGCTTCTTCTCGCGCAGCTCCTCCAAGTCAAGCAAGAGGAACAAGGCCAGGAAGAGCGCCTCCACCGCCGGCTGCTTGGATGCCCAGCACATACGGGCGAATCTCCGCATGTCCATGTCCAGTTCGATGAGGAGCACCAGGGGCCACGGCGGCGGGGGGGCaggctcctcctccgcctcgcaTCCTCcaggcagcagctgcagcagcgcaggagcaggaggatcCGGTTGCGGTCTAGCCTACGACGCGGCCAGCAATGCCAGCAGCAGTGGAAGTGGCAGTGGGAGTGGAAAGGCCGCCTCCCCGGGCAGCTATAGCTGCAATGCCCTCAACGTGGACTTCACGTCCTACACGGCCACCCATCAGTGGACCCGGATGCTCGAGTGCGCCGAGTTCGTGGGAGCCAAGCGGAGCAAGCACACAGTGGTCGCCTACAAGGATGCGATGTTCGTGTTCGGTGGCGACAACGGCAAGAACATGCTGAACGACCTGATCCGCTTcggcgtgaaggacaagtcCTGGGGCCGCGCATGTGCCACGGGAACGCCGCCTGCGCCGCGATACCATCACTCGGCTGTGGTGGCCGGCAGCTCGATGTTCATCTTTGGCGGCTACACCGGCGACATTCACTCCAACTCGAACTTGACCAACAAGAACGATCTGTTCGAGTACAAGTTCCAGAGCGCCATGTGGGTGGAATGGAAGTTCTCCGGTCGCCAGCCGGTTCCACGATCCGCGCACGGAGCCGCCGTGTACGACAACAAGATGTGGATCTATGCGGGCTACGATGGCAATGCCCGGCTGAACGATATGTGGACGCTGAACCTCACCGGGGGGAATCATCAGTGGGAGGAGGTGGACCAGCTGGGCGACCGTCCGCCCACCTGCTGCAATTTTCCCGTCGCGGTGGCCAGAGACGCCATGTACGTGTTTTCGGGACAGAGTGGCCTGCAGATAACCAACTCGCTGTTTGAGTTCCACTTCAAGACGCGCACCTGGCGGCGCATTTCCAATGAGCCCGTCCTGCGCGGCGCCACCTCTGCTCCTCCCTCGCGAAGGTATGGCCACACGATGGTGCATCACGATCGGTTCCTGTACGTCTTCGGGGGATCGGCGGACTCGACGCTGCCGAACGATCTGCACTGCTACGACTTGGACTCGCAGGTGTGGTCCGTCATCCTGCCGGAGCAGAACTCGGATGTGCCCTCCGGCAGGGTGTTCCATGCCTCCGCAGTCATCTGCGATGCCATGTACATTTTCGGTGGGACTGTGGACAACAGTGTGAGGCGGGGCGACACCTACCGCTTCCAGTTCTCCTCGTATCCGAAGTGCACGCTGCGCGATGACTTCGGCAAGTTCTTCGTGGACAAACAGTTCTGCGATATTCAGTTTATCGTTGGAGCCGAGGAGATTCGCATCCTGGCGCACATCGCCTTTGTGGCGGCGCGTTCGAAGTATTTAAGGAACAAAATATTGGCCGCCCGGGAGGCGCGCCAGCAGCAGATGGAGAAGGTCTACGGGGTGGGCCTGCCGGTGGACGCACTGACTCTGAATACGGGCGCGGGCGGGGACCGCGGACCCATGCTAGAGGTGCGACTGGCCCACGCCTCCCCCGAGGCCTTCGACATCATCCTGAACTACATTTACACCGATCGCATCGATTTGAAGGACACGTACAGCAAGAACATCATCATTCTGATCACGGATATTTACCAACTGGCCGGATTGTTCACCATGCCGCGGCTGGCCCACGGCTGTATCCAGTATTTGGACTACAAGATAAACAAGCTCAACGTTCTGGAGGCGCTCTATAATGCGGACAAAAGCAACATTAAGATCATCAAAGATCACTGCATGCAGTTCATCATCAAGGACGAGAACTTCACCGATGTGGTCATGTCCAGTGAGTTTAGCGATTTGGACAAGCCTCTGCTTGTGGAGATCATACGCAAGCGTCTGCATCCCAGCAAACTGGTGATGGACACCAGCTATGAGGCAAATATAGGAACCACCTTGGAGATCGACCTGTGCGCATTTTTGGAGTCGACTGGCAACGATTTCTGCGATATAAGCCTCGTCCTGGAGGATCATGTGATACCGGCCCATAAGTCGGTGTTGTCATCTCGTTGCACATACTTTCAGGGCATGTTCCGATCTTTCATGCCCCCGGATAACACCGTCAATatCCAAATTGGCGAAATTTCTCCTTCGCTTGAGGCCTTCCGCTCCCTGTTGCGCTACATTTACTACGGCGAGACGAAGATGCCGCCCCAGGATGCACTGTACCTCTTCCAGGCGCCCTGCTTCTACGGATTGGCCAACAACCGGCTGCACGCCTTCTGCAAATACTCCCTGGAGCACAACATCACGTTCGAGAATGTGCTGCAGACGCTGGAGGCCTCCGACATTACCAAGATCTATGACATCAAGGAGTACGCCCTTAAGCTGATTGTGAAGGACTTTGCCAAGGTCGCAAGGCTGCCGAAGATTGCCGGTTTGTCGCGCGAACTGTTGCTGGAGATCATACGCGCTGTGGCCGATTCGCACGGCGAGTTTCTCACGCGGATCAATATCAATACAGATATCTGA
- Protein Sequence
- MLKSISGGVGVASTERGGGGGGGGAGGSGGGGGGAGGSASGSRSTSGSGRANCGLGSSSISSGLSAVCGFVTGGGGGGAADRDRDRDRERAVANSSGSSGSTPAGILYCPACVAASNQQNPSQNSSPQHEGFFSRSSSKSSKRNKARKSASTAGCLDAQHIRANLRMSMSSSMRSTRGHGGGGAGSSSASHPPGSSCSSAGAGGSGCGLAYDAASNASSSGSGSGSGKAASPGSYSCNALNVDFTSYTATHQWTRMLECAEFVGAKRSKHTVVAYKDAMFVFGGDNGKNMLNDLIRFGVKDKSWGRACATGTPPAPRYHHSAVVAGSSMFIFGGYTGDIHSNSNLTNKNDLFEYKFQSAMWVEWKFSGRQPVPRSAHGAAVYDNKMWIYAGYDGNARLNDMWTLNLTGGNHQWEEVDQLGDRPPTCCNFPVAVARDAMYVFSGQSGLQITNSLFEFHFKTRTWRRISNEPVLRGATSAPPSRRYGHTMVHHDRFLYVFGGSADSTLPNDLHCYDLDSQVWSVILPEQNSDVPSGRVFHASAVICDAMYIFGGTVDNSVRRGDTYRFQFSSYPKCTLRDDFGKFFVDKQFCDIQFIVGAEEIRILAHIAFVAARSKYLRNKILAAREARQQQMEKVYGVGLPVDALTLNTGAGGDRGPMLEVRLAHASPEAFDIILNYIYTDRIDLKDTYSKNIIILITDIYQLAGLFTMPRLAHGCIQYLDYKINKLNVLEALYNADKSNIKIIKDHCMQFIIKDENFTDVVMSSEFSDLDKPLLVEIIRKRLHPSKLVMDTSYEANIGTTLEIDLCAFLESTGNDFCDISLVLEDHVIPAHKSVLSSRCTYFQGMFRSFMPPDNTVNIQIGEISPSLEAFRSLLRYIYYGETKMPPQDALYLFQAPCFYGLANNRLHAFCKYSLEHNITFENVLQTLEASDITKIYDIKEYALKLIVKDFAKVARLPKIAGLSRELLLEIIRAVADSHGEFLTRININTDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00479535;
- 90% Identity
- iTF_00565434;
- 80% Identity
- -