Basic Information

Insect: Drosophila merina
Gene Symbol: bab2
Assembly: GCA_035047645.1
Location: JAWNPH010000059.1:15384023-15385820[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7.3e-18 1.3e-14 53.9 0.0 1 43 63 106 63 108 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7.3e-18	1.3e-14	53.9	0.0	1	43	63	106	63	108	0.95

Sequence Information

Coding Sequence: ATGATTGAGACTGGAGGACATAGTGGCTGGATGGGAGCCGCTGCTGCAGCCACTGGGGCAGCTTCCGTTGCGGCAGACAGTTACCAGTACCAGTTGCAGTCCATGTGGCAAAAGTGCTGGAACACCAACCAACAGAACCTGGTGCAACAGTTGCGATTCCGCGAGCGAGGCCCTCTGAAGTCGTGGCGTCCTGAGGCCATGGCCGAGGCCATCTTCAGTGTCCTCAAGGAGGGTCTGTCCCTTTCGCAAGCTGCCCGCAAGTACGACATCCCGTATCCCACTTTCGTCCTTTATGCCAACCGAGTGCACAACATGCTGGGACCCTCCCTGGATGGCGGCGCAGATCCTCGGCCCAAGGCCAGAGGTCGTCCCCAGAGGATCCTGCTGGGCATGTGGCCGGAGGAGCTCATTCGCAGTGTCATCAAGGCGGTGGTCTTCCGGGACTACCGTGAGATTAAGGAAGACATGGGAGCTCATCAATATGCCAATGGACAGGCTCATGGTTCCCACTTTGGAGCAGGATCTGCTTCGAACGGCTACCATAGTGCCGCCGCGGCCAAGATGGCAGCCCAGAATGCCGCATTGGCTCCTCCGGACGCTGGTAGTCCGCTGAGCTCGATGACGGAGACGCTGCGCCGCCAGATCCTctcgcagcagcaacaacagcagcaccaccagcagcagcagtcgcaccaccagcagcagccgtCACACCACCAGCAACAGTCACCCCACGGCCAGTCCATGAACATGTACAAGTCGCCGGCTTATCTGCAAAGATCCGAGATCGAGGATCAGGTttccgcagcagcagcagtggctgcggcggcggccaagcatcagcagcagcagcagggcgACCGTCGAGGCTCCGAGAACTTGCCGGATCTGAGTGCGCTTGGCCTGATGGGTCTGCCAGGACTGAATGTGATGCCTTCGCGGGGATCGGCGGGTGGAGCTGGCGGTGCCGCTCCTAACAGTGCCGCCTCCTATGCCCGGGAGCTGTCGCGCGAACGAGAGCGCGATAGGGAGCGCGAAAGAGAGAGGGAACGGGAACTGTCCCGACAGTATGGCAGCCAGTCGAGGGGTTCTAGTTCCGGGTCCGGCAGTGCCAAGTCCCTGTCCGCCAGTCAACGACCTGGAGCCGCCTCTCCCTACTCCGCCGCCCACTATGCGAAGCATCAGGCCAGCGCCTACAACAAGCGATTCCTGGAGAGCCTGCCTGCCGGCATCGACTTCGAGGCCATTGCCAACGGCCTGCTCCAGAAGTCCGTAAACAAGAGCCCGCGCTTCGAGGACTTCTTCCCCGGACCCGGCCAGGACATGAGCGAACTCTTTGCCAATCCGGACGCGGCGGCAGCTGCCGCAGCGGCGGCCGCCTACGCTCCTGGCGCCGTGGGAGGGGCAGGTGGCGGTCCTGGCATCCGGGAGTCGCCGCTGATGAAGATCAAGCTGGAGCAGCAGCATGCCACCGAACTGCCGCACGAGGATTGA
Protein Sequence: MIETGGHSGWMGAAAAATGAASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGADPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDMGAHQYANGQAHGSHFGAGSASNGYHSAAAAKMAAQNAALAPPDAGSPLSSMTETLRRQILSQQQQQQHHQQQQSHHQQQPSHHQQQSPHGQSMNMYKSPAYLQRSEIEDQVSAAAAVAAAAAKHQQQQQGDRRGSENLPDLSALGLMGLPGLNVMPSRGSAGGAGGAAPNSAASYARELSRERERDRERERERERELSRQYGSQSRGSSSGSGSAKSLSASQRPGAASPYSAAHYAKHQASAYNKRFLESLPAGIDFEAIANGLLQKSVNKSPRFEDFFPGPGQDMSELFANPDAAAAAAAAAAYAPGAVGGAGGGPGIRESPLMKIKLEQQHATELPHED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00615491; iTF_00503914; iTF_00614831; iTF_00579906; iTF_00538883; iTF_00504612; iTF_00494310; iTF_00487925; iTF_00566006; iTF_00515520; iTF_00593761; iTF_00612737; iTF_00533027; iTF_00485062; iTF_00540998; iTF_00609096; iTF_00491435; iTF_00488588; iTF_00525808; iTF_00569616; iTF_00490003; iTF_00561683; iTF_00489301; iTF_00524342; iTF_00613431; iTF_00477944; iTF_00617560; iTF_00482906; iTF_00492156; iTF_00550180; iTF_00571823; iTF_00529489; iTF_00511930; iTF_00581458; iTF_00536690; iTF_00565299; iTF_00475861; iTF_00547990; iTF_00605497; iTF_00606235; iTF_00481469; iTF_00480094;
90% Identity: iTF_00547990;
80% Identity: -