Dere003289.2
Basic Information
- Insect
- Drosophila erecta
- Gene Symbol
- bab2
- Assembly
- GCA_000005135.1
- Location
- CH954178.1:1142261-1144200[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-17 3e-14 52.5 0.0 1 43 63 106 63 108 0.95
Sequence Information
- Coding Sequence
- ATGATCGAGAGTGGAGGCCACGGCGGCTGGATGGGAGCGGCAGCTGCGGCCACTGGAGCAGCTTCTGTGGCGGCAGACAGCTACCAGTACCAGCTGCAGTCCATGTGGCAAAAGTGCTGGAACACCAACCAGCAGAACCTGGTGCAGCAGCTGAGGTTCCGCGAGCGCGGCCCACTGAAGTCCTGGCGACCCGAGGCCATGGCCGAGGCCATCTTCAGTGTCCTGAAGGAGGGTCTCTCCCTGTCCCAGGCGGCCCGCAAGTTCGACATACCCTATCCCACCTTCGTCCTGTACGCCAACCGGGTGCACAACATGCTGGGTCCCTCGCTGGATGGCGGAGCTGATCCGCGGCCAAAGGCGCGCGGTCGTCCGCAGAGGATCCTGCTGGGCATGTGGCCGGAGGAGCTCATCCGCAGCGTCATCAAGGCGGTGGTGTTCCGGGACTATCGCGAGATCAAGGAGGACATGAGCGCCCACCAGTACGCCAATGGACAGGCCCATGGTACCTACATCGGAGGAGGCACCACCACGAATGGCTACCACAGTGCTGCGGCAGCCAAGCTGGCCGCCCAGAATGCTGCACTGGCTCCGCCGGACGCGGGCAGCCCGCTGAGTTCCATGACCGAGACCCTGCGCCGCCAGATCCtctcgcagcagcagcagcagcaacagcagcagcagcaccaccaacagcagcaggcgcaccaccagcagcagccctcgcaccaccagcagcagtcgcCCCACGTCCAGTCCATGAACATGTACAAGTCGCCGGCCTATCTGCAGCGCTCCGAGATCGAAGATCAAGTGTCCGCCGCGGCGGccgtggcggcggcggcggccaagcaccagcagcagggGGAGCGGAGGGGCTCGGAGAACCTGCCCGACCTCAGTGCCCTGGGCCTGATGGGTCTGCCGGGCCTGAACGTGATGCCCTCCCGGGGATCCGGCGGCGGAAGTGGCGGCGCAGCGCCCAACAGTGCCGCTTCCTATGCCCGCGAGTTGTCCCGCGAACGGGAACGCGATCGGGAGCGCGAGCGGGAGAGGGAAAGGGAGCTGTCCCGCCAGTATGGCAGCCAGTCGCGGGGATCGAGTTCCGGTTCCGGGAGCGCCAAGTCCCTGAACGCCAGCCAAAGACCGGGCGCCGCCTCGCCCTACTCCGCCGTCCACTATGCCAAACATCAGGCGAGTGCCTACAACAAGCGCTTTCTGGAGAGCCTGCCCGCCGGCATCGACCTGGAGGCCTTCGCCAACGGACTGCTCCAGAAGTCGGTGAACAAGAGTCCGCGCTTCGAGGACTTCTTCCCGGGCCCCGCCCAGGACATGAGTGAGCTGTTTGCCAATCCGGATCCCagtgcagctgctgcggcggcggccgcCTATGCGCCTCCTGGCGCCATCCGGGAGTCCCCGCTGATGAAGATcaagctggagcagcagcacgcCACCGAACTGCCGCACGAGGATTGA
- Protein Sequence
- MIESGGHGGWMGAAAAATGAASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSLDGGADPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDMSAHQYANGQAHGTYIGGGTTTNGYHSAAAAKLAAQNAALAPPDAGSPLSSMTETLRRQILSQQQQQQQQQQHHQQQQAHHQQQPSHHQQQSPHVQSMNMYKSPAYLQRSEIEDQVSAAAAVAAAAAKHQQQGERRGSENLPDLSALGLMGLPGLNVMPSRGSGGGSGGAAPNSAASYARELSRERERDRERERERERELSRQYGSQSRGSSSGSGSAKSLNASQRPGAASPYSAVHYAKHQASAYNKRFLESLPAGIDLEAFANGLLQKSVNKSPRFEDFFPGPAQDMSELFANPDPSAAAAAAAAYAPPGAIRESPLMKIKLEQQHATELPHED*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00545891;
- 90% Identity
- iTF_00547990;
- 80% Identity
- -