Dbak002073.1
Basic Information
- Insect
- Drosophila bakoue
- Gene Symbol
- bab2
- Assembly
- GCA_008044335.1
- Location
- VNJL01002375.1:96151-98267[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-17 4.7e-14 52.4 0.0 1 43 63 106 63 108 0.95
Sequence Information
- Coding Sequence
- ATGATCGAGAGTGGAGGACATGGTGGCTGGATGGGTGCTGCAGCCGCAGCCACAGGAGCTGCCTCTGTGGCGGCAGACAGCTACCAGTACCAGTTGCAGTCCATGTGGCAAAAGTGCTGGAACACCAACCAACAGAACCTGGTTCAGCAGCTAAGATTCCGCGAGCGAGGACCCTTGAAGTCCTGGCGACCAGAGGCCATGGCAGAGGCCATCTTCAGTGTGCTGAAGGAGGGCTTGTCCTTGTCGCAGGCTGCCCGCAAATTCGACATCCCGTATCCCACTTTCGTTCTGTATGCCAATCGAGTTCATAATATGCTGGGACCCTCGTTGGATGGCGGTGCCGATCCCAGACCCAAGGCCAGGGGTCGTCCGCAGCGTATCCTGCTGGGGATGTGGCCCGAGGAGCTCATCCGCAGCGTCATTAAGGCGGTGGTCTTCAGGGACTATCGCGAAATCAAGGAAGACATGAGTGCCCACCAGTATGTCAATGGACAAGCCCATGGTTCCCACTTTGGCGCTGGTTCCGCCTCGAATGGTTATCACagtgccgctgccgccgccaagaTGGCCGCCCAGAATGCGGCACTGGCTCCGCCGGACTCTGGCAGTCCGCTGAGCTCCATGACGGAGACCCTGCGCCGCCAGATCctctcccagcagcagcagcagcaacagcagcaggcgcaccACCACCAGGCACAGtcgcaccaccagcagcaaccaTCGCACCACCCACAGCAGTCGCCCCACGGCCAGTCGATGAACATGTACAAGTCGCCGGCTTACCTGCAACGCTCCGAGATCGAGGATCAGGTATccgcggcggcggcagtagctgcagcggcggccaagcaccagcaccaacaccagcagcagcagcagcagggagcGGACCGAAGGGGAGCAGAGAACCTGCCCGACCTCTCGGCTCTGGGACTCATGGGTCTGCCCGGTCTGAATGTGATGCCCTCGCGGGGATCAGGCGGAGGAGCGGGTGGCGCGGCGCCCAACAGTGCCGCCTCCTATGCACGCGAGCTATCCAGAGAGCGGGAGCGAGATCGTGAGCTGTCGCGGGAACGGGAAAGGGAGCGCGAACTGTCCCGCCAGTATGGCAGCCAGTCGCGGGGCTCCAGTTCCGGTTCCGGCAGCGCCAAGTCCCTGACCGCCAGCCAAAGACCCGGCGCCGCCTCGCCCTACTCCGCCGCCCACTATGCCAAGCACCAGGCCAGCGCCTACAACAAGCGCTTCTTGGAGAGCCTGCCCGCCGGCATTGACTTCGAGGCGATTGCCAACGGGCTGCTCCAGAAGTCGGTGACCAAGAGTCCCCGCTTCGAGGACTTCTTCCCGGGACCAGGCCAGGACATGAGCGAGCTCTTTGCCAATCCGGATGCAgccgctgcggcggcggcggcggcaacctATGCGCCGCCCGTGAATCCGGTGCGGGAATCGCCGCTGATGAAGAtcaagctggagcagcagcatgcCGCCGATCTGCCGCACGAGGATTGA
- Protein Sequence
- MIESGGHGGWMGAAAAATGAASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSLDGGADPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDMSAHQYVNGQAHGSHFGAGSASNGYHSAAAAAKMAAQNAALAPPDSGSPLSSMTETLRRQILSQQQQQQQQQAHHHQAQSHHQQQPSHHPQQSPHGQSMNMYKSPAYLQRSEIEDQVSAAAAVAAAAAKHQHQHQQQQQQGADRRGAENLPDLSALGLMGLPGLNVMPSRGSGGGAGGAAPNSAASYARELSRERERDRELSRERERERELSRQYGSQSRGSSSGSGSAKSLTASQRPGAASPYSAAHYAKHQASAYNKRFLESLPAGIDFEAIANGLLQKSVTKSPRFEDFFPGPGQDMSELFANPDAAAAAAAAATYAPPVNPVRESPLMKIKLEQQHAADLPHED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00545891;
- 90% Identity
- iTF_00488588;
- 80% Identity
- -