Basic Information

Gene Symbol
Ubp1
Assembly
GCA_035045185.1
Location
JAWNPF010000154.1:8117870-8131962[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.16 8e+02 -0.7 1.0 104 140 27 63 21 78 0.71
2 4 0.83 4.2e+03 -3.1 0.2 2 28 79 105 73 115 0.64
3 4 5.2e-52 2.6e-48 164.4 0.1 22 188 411 574 397 583 0.91
4 4 4.6e-13 2.3e-09 37.0 0.8 188 222 647 681 639 682 0.91

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTCTATCGCAAAGTTCCGGCCTGTTGGATTTACAAAGCATATTTGATCCACAATAttcaatacaacaacaacatcagcagcagcaacagttgcaaatTCATATACcatcagaacaacaacaacaacaacaacagcgcacTTCAACGAAATTTGATCTAAGCATTTTCAACGATTTCGACCAAATGGAAttcaacaacaacttgaatcGAAATCATCATAATCAGTatcagaataataataataataataataacagtaatagcaataataataataatagcaacagcattaataacaacaaccacaataccaacaacaacaacattcataCGCACCAAACTAACGGAGAAAATCTTAATCAGATCCAAAATAGTCATTTCATTAGCGGCTATCATCATCAGCATATTGGATCGGATTATGAGCCAGTGATTAACTTTGTTGATTCACCGCCAAACTCTGAGGAATCTTGGACAGACGGACAGTCCAAGGATTCACCAGGACCGCAAATTATCGACGTGAGGACAATTTACTCAGACAGTGGTTCGCGCAAAAGACGAATGGATTGGTACTCATTGGACATCGGTCAAAGTGAAAATTCACCGACAACTCAATCAGGCGAGATACCCAATAAGGTGGCACACCACGAGAAGGATAAACATAAACGTGAAAAGCATTCAGGCCGCAGCAGTTGGAGCGACGATATAGGCTTTGATCTGAACGCTGAGTTTAATAGTAACTCGTATTTGAACAATGAAAACTTTTTATCGTTCTCCCCGAGCCTGACGGCACTTAAACAGGAGCCGCAAACGGAGCAGCTCAAGCCGAACGCAAAGATATCCTTGGagagcggcagcaacagctcctcGATTGGCAAAAGCGACAAATCGCCGTTGGGCGAGGCAAATCATTCGCCACAGCGCACGGGTCAGgaattagcagcagcagcagcaggaactgGAGGCGgagcaattgcagcagctggCGGCAAGCATGAGTTGAACCCCGGCAACATTTGTGGCTGTGGCTCGCCGCAAGGCTCGCCCGCCGCAGCGgattttgaattgaattgcagCGCCAATGGGAACGAAGCCACAACGGCGGAGAAAAACCGGGCTGCATCTGGCAATGAGGCCTTTGCACAGGCGCCGCGCTCTGGACTGCAGCCGCAGCTGAGCGTTGTCGAGGCGGCCAAAATTGAGCCCAGCTCGTCGGGCGGAGCATCTCATGCCGAGGATCATAAATTTCAGTACATTTTGGCAGCAGCCACCTCAATTGCAACGAAGAACAATGAGGAGACATTAACCTATCTGAATCAGGGTCAAAGCTATGAGatcaaattgaagaaaattggAGATTTGTCATTCTATCGCGATAAGATTTTGAAGagcGTTATCAAAATCTGTTTCCACGAGCGTCGTTTGCAGTTTATGGAACGCGAACAGATGCAGCAATGGCAGGCATCGCGTCCAGGTGATCGCATTATCGAGGTAGATGTACCATTGTCGTATGGCCTGTGCCATGTCTCGCAGCCATTGAGTGCGAATGCATTGAATACTGTCGAAATCTTTTGGGATCCATTGAAGGAGGTCGGTGTTTACATCAAGGTTAATTGCATTTCAACCGAATTTACACCAAAGAAGCACGGTGGTGAAAAGGGTGTACCATTTCGACTACAAATTGAAACCTATATAgaaaacacaacaacagctaattgtagcaacaacaacaacaacaacaacaacaacaatagcagctcgagcagcagcagcaacagcagctccagcagtagcagcaccagcagcaacaacagcactggcaacacaaccagcaacaacaacaacgcatcAGGTGTTACCTCCGCTGGACAGACAGATAATCGGAATGCAAACAGCGGCACCATCGCCGGCCTGGCAGCACTCAATGGCAAGCAGGCGGTGCATGCCGCTGCCTGTCAGATAAAGGTCTTCAAGCTAAAGGGCGCCGATCGCAAGCATAAACAGGATCGCGAAAAGATCCAGAAGCGTCCGCAGTCTGAGCAGGACAAGTTTCAGCCCAGCTACGAGTGCACCATTATGAATGATATATCATTGGATTTGATAACGCCAGCCACCACAACTGGCTGCTACAGTCCCGAATATATGAAATTGTGGCCCAATTCGCCGGTTCATATACCAAAATATGATGGAATGTTGCCATTTGCCAGCAGCGCATCACCggcggccagcagcagcccaaTTGCTATCAATTCGGTGACATCCACGAATTCGCCAACATTGAAACTAATGGATGCCACGAACATGGTGTCGCCGCAGCATGTGCCAGCGGATATGGATGATTATaaTCAGAACATAATGCCCGAATCAACGCCCGCACAAGTCACACAATGGCTGACACATCATCGTCTGACGGCCTACCTCAACACCTTTGCGCATTTCTCGGGCGCGGATATTATGcgCATGTCCAAAGAGGATCTTATACAAATCTGTGGACTCGCCGATGGCATACGcatgtttaatatattgcgCGCCAAATCCATTGCGCCCCGTCTGACGATCTATGCCAGCATGGATGGCTGCAGCTACAATGCCATCTACTTGCTCTCTAATACGGCCAAGGAGTTGCAGCAGAAGATCTATAAGCTGCCCGGTTTCTATGAGTTCATGGCTAAGGGCGGCGCTTCTGGCCTTTTGGAGAATGGCAGCAATGTGACAGCTGCcaccgcagcagctgcagcagccgctgccgctctATACAACAATTGGGGCATGCATTCGAAATATTCTGGCAGCGGTTCGAACATCTTCAATGAGGTGAACAAGAGTTGCGTCTACATATCGGGACCGTCGGGCATACACGTCAGCGTCAGCGATGAGGTGCTCAACAATGAGGTGAAGGACGGCAGTCTCTATGCCCTGGACGTGCAGGGTGGCAAAGTTATATTGAAGCTGATCAACAAGCAGGACAACAATTAA
Protein Sequence
MALSFLSQSSGLLDLQSIFDPQYSIQQQHQQQQQLQIHIPSEQQQQQQQRTSTKFDLSIFNDFDQMEFNNNLNRNHHNQYQNNNNNNNNSNSNNNNNSNSINNNNHNTNNNNIHTHQTNGENLNQIQNSHFISGYHHQHIGSDYEPVINFVDSPPNSEESWTDGQSKDSPGPQIIDVRTIYSDSGSRKRRMDWYSLDIGQSENSPTTQSGEIPNKVAHHEKDKHKREKHSGRSSWSDDIGFDLNAEFNSNSYLNNENFLSFSPSLTALKQEPQTEQLKPNAKISLESGSNSSSIGKSDKSPLGEANHSPQRTGQELAAAAAGTGGGAIAAAGGKHELNPGNICGCGSPQGSPAAADFELNCSANGNEATTAEKNRAASGNEAFAQAPRSGLQPQLSVVEAAKIEPSSSGGASHAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLSANALNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENTTTANCSNNNNNNNNNNSSSSSSSNSSSSSSSTSSNNSTGNTTSNNNNASGVTSAGQTDNRNANSGTIAGLAALNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQDKFQPSYECTIMNDISLDLITPATTTGCYSPEYMKLWPNSPVHIPKYDGMLPFASSASPAASSSPIAINSVTSTNSPTLKLMDATNMVSPQHVPADMDDYNQNIMPESTPAQVTQWLTHHRLTAYLNTFAHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKSIAPRLTIYASMDGCSYNAIYLLSNTAKELQQKIYKLPGFYEFMAKGGASGLLENGSNVTAATAAAAAAAAALYNNWGMHSKYSGSGSNIFNEVNKSCVYISGPSGIHVSVSDEVLNNEVKDGSLYALDVQGGKVILKLINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2