Basic Information

Gene Symbol
Ubp1
Assembly
GCA_037075325.1
Location
JBAMCG010000040.1:17280288-17292907[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.58 5.3e+03 -3.5 0.6 105 129 28 52 24 70 0.62
2 5 2 1.8e+04 -5.6 3.9 4 44 86 123 78 129 0.52
3 5 2.1e-52 1.9e-48 164.7 0.2 23 189 421 584 401 594 0.90
4 5 0.23 2.1e+03 -2.3 0.7 10 31 604 625 584 645 0.46
5 5 2e-13 1.9e-09 37.2 0.6 188 222 668 702 659 703 0.91

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTCTATCGCAAAGTTCCGACCTGTTGGATTTACACAGTATATTTGATCCACAATAttcaatacaacaacaacaaaagcagcagcagcaacaacacttgcaaattcatatatcatcagaccaacaagaacaactacaacaacaacgcactTCAACGAAATTCGATCTGAGCATTTTCCACGATTTCGACCAAATGgaattcaacaacaacaataacttgAATCGAAGTCATCATAATCAGTatcagaataataataataacaacagcaatagcagtaataataataataccatcaataataataataataacaaccacagtaccaataacaacaacaacaacattcatACGCACCAAACTAACGGAGAAAATCTTAGTCAGATCCAAAATAATCATTTCATTAGCGGCTACCATCATCAGCATATTGGATCGGATTATGAGCCAGTGATTAACTTTGTTGATTCACCGCCAAACTCTGAGGAATCTTGGACAGACGGACAGTCCAAGGATTCACCAGGACCGCAAATTATAGACGTGAGGACAATTTACTCAGACAGTGGTTCGCGCAAAAGACGAATGGATTGGTACTCATTGGACATTGGTCAAAGTGAAAATTCACCGACATCTCAATCAGGCGAAATACCTAATAAGGTGGCACATCACGAGAAAGATAAGCATAAACGTGAAAAGCATTCAGGTCGCAGCAGCTGGAGTGACGATATAGGTTTTGATCTGAACGCTGAGTTTAACAGTAACTCGTATTTGAACAATGAAAACTTTTTATCGTTCTCCCCGAGCCTGACGGCACTTAAACAGGAGCCCCAAACGGAGCAGCTCAAACCGAACACAAAGATATCATTGGATAGCGGCAGCACCGTCTCCGCAATTGGCAAAAGTGACAAATCGCCATTGGGCGAGGCGAATCATTCACCACAGCGCACGGGCCAGGagattgcagcaacagcagcagcaccatcaggAATTGGAGGAGGAGCACTTGCCGAAGCTGGTGGGAAGCATGAGTTGAACACTGGCAACatttgtggctgtggctcgcCGCAAGGCTCGCCCGCCGCAGCggattttgaattgaattgcagTGTCAATGGGAACGAAGCCGCATCGGGTGAGAAAACCCGAACTGCATCTGGCCATGAGGTCTTTGCACTGGCACCGCGCTCtggactgcagcagcagctgagcgttGTCGAGACGGCCAAAATAGAGCCCTGCTCGTCGGGCGGTGCATCTCATGCAGAGGATCACAAGTTTCAGTACATTTTGGCCGCGGCCACCTCAATCGCAACAAAGAACAATGAGGAGACATTGACCTATCTGAATCAGGGTCAAAGCTATGAGatcaaattgaagaaaatcGGAGATTTGTCTTTCTATCGCGATAAGATCTTGAAGAGCGTTATCAAAATTTGTTTCCACGAGCGTCGTTTGCAGTTCATGGAACGCGAACAGATGCAGCAATGGCAGGCATCGCGTCCAGGTGATCGCATTATCGAGGTAGATGTACCGTTATCGTATGGCCTGTGCCATGTGTCGCAGCCATTGAGTGCGAACGCATTGAATACTGTTGAAATCTTTTGGGATCCATTGAAGGAGGTCGGTGTTTACATCAaggttaattgcatttcaaccGAATTTACACCAAAGAAGCACGGTGGTGAAAAGGGTGTACCATTTCGGCTACAAATTGAAACCTATATAGAAAACACAACAACTGCTaattgtaacaacaacaacagtactAATatcactaacaacaacaacagcagctcgagcagcagcagcaacagcagctccagcagcaccagcaccagcaccagcagcagcaacaacagcactggcaacaacaacgcaagCAATACAActagcaccaacaacaaaaacaacggaTCGGGCATTACTTCACCGGGTCAGTCTGATAATCGCAATGCAAATGCTGGCACCATCTCCGGCCTGGCAGCGCTCAATGGCAAACAGGCAGTGCATGCAGCTGCCTGTCAGATAAAGGTCTTTAAGCTAAAGGGCGCCGATCGCAAGCATAAACAGGACCGCGAGAAGATCCAGAAGCGTCCACAGTCCGAGCAGGACAAATTTCAGCCCAGCTACGAGTGCACCATCATGAACGATATATCATTGGACTTGATAGCGCCAGCCACCACAACTGGTTGCTATAGTCCTGAATATATGAAATTGTGGCCGAATTCGCCGGTTCACATACCAAAATATGATGGAatgttgccatttgccagcAGCGCATCACcggcggccagcagcagcccaatTGCTATCAATTCGGTGACATCCACAAATTCGCCAACGTTGAAACTTATGGATGCCACAAGCATGGTGTCGCCGCAGCATGTGCCAGCGGATATGGATGATTATAACATAATGCCCGAATCGACGCCCGCTCAAGTCACACAATGGCTGACGCATCATCGTCTGACAACCTACCTCAACACCTTTACGCATTTCTCGGGCGCGGATATTATGCgCATGTCCAAAGAGGATCTAATACAAATCTGCGGACTCGCCGACGGCATACGcatgtttaatatattgcgCGCCAAATCCATTACGCCCCGTCTGACGCTCTATGCCAGCATGGATGGCTGCAGCTACAATGCCATCTACTTGCTCTCTAATACGGccaaggagctgcagcagaaaaTCTATAAGCTGCCCGGTTTCTATGAGTTTATGGCCAAGGGCGGCTCGTCTGGCCTCTTGGAGAATGGCGGCAATGTgccagctgccgcagcagcagcggctgcggctgctgccgccgctctATACAACAATTGGGGCATGCATTCGAACATCTTCAATGAGGTGAACAAGAGTTGCGTCTACATGTCGGGGCCATCGGGCATACTTGTGAGTGTCAGCGATGAGGTGCTCAACAATGAGGTGAAGGACGGCAGTCTCTATGCCCTGGATGTGCAGGGTGGCAAGGTTATATTGAGGCTGATCAATAAGCAGGATAACaactaa
Protein Sequence
MALSFLSQSSDLLDLHSIFDPQYSIQQQQKQQQQQHLQIHISSDQQEQLQQQRTSTKFDLSIFHDFDQMEFNNNNNLNRSHHNQYQNNNNNNSNSSNNNNTINNNNNNNHSTNNNNNNIHTHQTNGENLSQIQNNHFISGYHHQHIGSDYEPVINFVDSPPNSEESWTDGQSKDSPGPQIIDVRTIYSDSGSRKRRMDWYSLDIGQSENSPTSQSGEIPNKVAHHEKDKHKREKHSGRSSWSDDIGFDLNAEFNSNSYLNNENFLSFSPSLTALKQEPQTEQLKPNTKISLDSGSTVSAIGKSDKSPLGEANHSPQRTGQEIAATAAAPSGIGGGALAEAGGKHELNTGNICGCGSPQGSPAAADFELNCSVNGNEAASGEKTRTASGHEVFALAPRSGLQQQLSVVETAKIEPCSSGGASHAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLSANALNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENTTTANCNNNNSTNITNNNNSSSSSSSNSSSSSTSTSTSSSNNSTGNNNASNTTSTNNKNNGSGITSPGQSDNRNANAGTISGLAALNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQDKFQPSYECTIMNDISLDLIAPATTTGCYSPEYMKLWPNSPVHIPKYDGMLPFASSASPAASSSPIAINSVTSTNSPTLKLMDATSMVSPQHVPADMDDYNIMPESTPAQVTQWLTHHRLTTYLNTFTHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKSITPRLTLYASMDGCSYNAIYLLSNTAKELQQKIYKLPGFYEFMAKGGSSGLLENGGNVPAAAAAAAAAAAAALYNNWGMHSNIFNEVNKSCVYMSGPSGILVSVSDEVLNNEVKDGSLYALDVQGGKVILRLINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00479256;
90% Identity
iTF_00544232;
80% Identity
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