Basic Information

Gene Symbol
Ubp1
Assembly
GCA_035047625.1
Location
JAWNPI010000085.1:12443468-12457289[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.59 3.4e+03 -3.0 0.7 106 140 27 61 22 88 0.65
2 3 3.9e-52 2.3e-48 164.4 0.1 22 188 403 566 386 579 0.91
3 3 3.3e-13 1.9e-09 37.1 0.7 188 222 643 677 636 678 0.91

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTTTATCGCAAAGTTCCGGCCTGTTGGATTTACAAAGCATATTTGATCCACAATAttcaatacaacaacaacagcaacaccaattgcaaattaatataccaccagagcaacaacaacaacaacatcaacgcACTTCAACGAAATTTGATCTAAGCATTTTCAACGATTTCGACCAAATGGaattcaacaacaacatcaacttGAATCGAAATCATCATAATCAGTatcagaataataataataataataataataatagcaataacCATAGTagcataaacaataataataacaacaaccacaataccaacaacaacatacaTACGCACCAAACTAACGGAGAAACTCTTAACCAGatcCAAAATAGTCATTTCATTAGCGGCtatcatcatcagcatattGGATCAGATTATGAGCCAGTGATTAACTTTGTTGACTCACCACCGAATTCTGAGGAATCTTGGACAGACGGACAGTCCAAGGATTCACCAGGACCGCAAATCATCGACGTGAGGACAATTTACTCAGACAGTGGTTCGCGCAAAAGACGAATGGATTGGTACTCATTGGACATCGGTCAAAGTGAAAATTCACCGACAACTCAATCAGGCGAAATACCAAATAAGTTGGCGCATCTTGAGAAAGATAAGCATAAACGTGAAAAGCATTCAGGTCGCAGCAGTTGGAGCGACGATATAGGTTTCGATCTGAGCGCCGAGTTTAATAGCAACTCATATTTGAACAATGAAAACTTTTTATCCTTCTCCCCGAGCCTGACGGCACTTAAGCAGGAGCCGCAAACGGAGCAGCTCAAACCGAACGCAAAGATATCCTTGGAGAGCGGCAGCAATAGCtcggcaattggcaaaaacgATAAATCGCCTTTAGGCGAGGCAAATCACTCAACACAGCGCACGGGCGAGGAGGTAGCCGCATCATcggcagttgcagcagctggtGGCAAGCATGAGTTGAACCCCGGCAATGTACGCGGCTGTGGCTCGCCGCAAGGCTCGCCCGCCGCAGCGGactttgaattgaattgcaatGCCAGTGGAAATGAAGCATCAACGGCTGAGAAACCCCGAGCAGCAACTGGCAATGAGGCCTATGCACAGGCGCCGCGCTCTGgactgcagccgcagctgagCGTTGTCGAGGCAGCCAAAATTGAGCCCAGCTCGTCGGGCGCTGCCCCTCATGGAGAGGATCATAAaTTTCAGTACATTTTGGCAGCGGCCACCTCGATTGCTACTAAGAACAATGAGGAGACATTGACCTATCTGAATCAGGGCCAAAGCTATGAGATCAAATTGAAGAAAATTGGTGATTTATCTTTCTATCGCGATAAGATTTTGAAGAGCGTCATCAAAATCTGTTTCCATGAGCGTCGTTTGCAGTTTATGGAACGCGAACAGATGCAGCAATGGCAGGCATCGCGTCCAGGTGATCGCATTATTGAGGTGGATGTGCCATTGTCGTACGGCCTGTGTCATGTGTCGCAGCCGCTGAGCGCGAATGCATTAAATACTGTCGAAATCTTTTGGGATCCATTGAAGGAGGTCGGTGTTTACATCAAggttaattgcatttcaacCGAGTTCACGCCAAAGAAGCACGGTGGTGAAAAGGGTGTACCATTTCGACTACAAATTGAGACctatatagaaaatacaaCAGCTAattgtggcaacaacaataacagcaataacagtAGCTCGAGCAGtagcagctcgagcagcagcagcagcagctccagcagcagcaacaacagctcgggcaacaacaatgctggCAATAtaactagcaacaacaacaacaacaacagcggccaAGGCGCTATTTCGGCGGGGCAGACAGATAATCGGAATGCAAACAGCGGTACCATCGCCGGCCTGGCAACACTCAATGGCAAACAGGCGGTGCACGCAGCTGCCTGTCAGATAAAGGTCTTCAAGCTAAAGGGCGCCGATCGCAAGCACAAACAGGATCGCGAAAAGATTCAAAAGCGTCCGCAGTCGGAGCAGGACAAGTTCCAGCCCAGTTACGAGTGCACCATTATGAATGATATATCATTGGATTTGATAGCGCCAGCCACCACAACTGGCTGCTACAGTCCCGAATATATGAAATTGTGGCCAAATTCGCCGGTGCATATACCAAAATATGATGGAATGTTGCCATTTGCCAGCAGCGCATCGCCggcggccagcagcagcagcccaatTGCTATCAATTCGGTGACATCAACGAATTCGCCAACATTGAAACTAATGGATACCACAACTATGGTGTCGCCGCAGCATGTGCCAGCGGACATCGATGACTATaatCAGAACATAATGCCGGAATCGACTCCCGCACAAGTCACGCAATGGCTAACGCATCATCGTCTGACGGCCTACCTCAACACATTTGCGCATTTCTCGGGCGCGGATATTATGCGCATGTCCAAAGAGGATCTAATACAAATCTGTGGACTTGCCGACGGCATACGCATGTTTAATATATTGCGCGCCAAAACTATTGCGCCGCGTCTGACGCTCTATGCCAGCATGGATGGCTGCAGCTATAGTGCCATCTATTTGCTCTCTAATACAGCCAAGGAGTTGCAGCAGAAGATCTATAAGCTGCCAGGATTCTATGAGTTCATGGCCAAGGGCGGCTCGTCTGGCCATTTGGAGAATGGCGGCAATGTGacagctgccacagcagcagcggcagccgctgcagcccTATACAACAATTGGGGCATGCACTCGAAATACTCCGGCAGCGGCTCGAACATATTCAATGATGTGAACAAGAGTTGCGTCTACATATCGGGGCCATCGGGCATACATGTGAGCGTCAGCGATGAGGTGCTCAACAACGAGGTGAAGGACGGCAGTCTCTATGCCCTCGATGTGCAGGCAGGCAAAGTTATACTGAAGCTGATCAACAAGCAGgataacaattaa
Protein Sequence
MALSFLSQSSGLLDLQSIFDPQYSIQQQQQHQLQINIPPEQQQQQHQRTSTKFDLSIFNDFDQMEFNNNINLNRNHHNQYQNNNNNNNNNSNNHSSINNNNNNNHNTNNNIHTHQTNGETLNQIQNSHFISGYHHQHIGSDYEPVINFVDSPPNSEESWTDGQSKDSPGPQIIDVRTIYSDSGSRKRRMDWYSLDIGQSENSPTTQSGEIPNKLAHLEKDKHKREKHSGRSSWSDDIGFDLSAEFNSNSYLNNENFLSFSPSLTALKQEPQTEQLKPNAKISLESGSNSSAIGKNDKSPLGEANHSTQRTGEEVAASSAVAAAGGKHELNPGNVRGCGSPQGSPAAADFELNCNASGNEASTAEKPRAATGNEAYAQAPRSGLQPQLSVVEAAKIEPSSSGAAPHGEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLSANALNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENTTANCGNNNNSNNSSSSSSSSSSSSSSSSSSNNSSGNNNAGNITSNNNNNNSGQGAISAGQTDNRNANSGTIAGLATLNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQDKFQPSYECTIMNDISLDLIAPATTTGCYSPEYMKLWPNSPVHIPKYDGMLPFASSASPAASSSSPIAINSVTSTNSPTLKLMDTTTMVSPQHVPADIDDYNQNIMPESTPAQVTQWLTHHRLTAYLNTFAHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTIAPRLTLYASMDGCSYSAIYLLSNTAKELQQKIYKLPGFYEFMAKGGSSGHLENGGNVTAATAAAAAAAALYNNWGMHSKYSGSGSNIFNDVNKSCVYISGPSGIHVSVSDEVLNNEVKDGSLYALDVQAGKVILKLINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00573080;
90% Identity
iTF_00544232;
80% Identity
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