Basic Information

Gene Symbol
Ubp1
Assembly
GCA_035045365.1
Location
JAWNPC010000110.1:16937052-16953133[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.97 6.7e+03 -3.7 4.6 100 136 29 67 18 82 0.54
2 4 1.3e-51 9e-48 162.7 0.2 22 188 439 602 419 612 0.90
3 4 0.46 3.1e+03 -2.6 0.1 6 25 613 632 603 639 0.47
4 4 3.3e-13 2.3e-09 37.1 0.7 188 222 682 716 674 717 0.91

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTCTATCGCAAAGTTCCGGCCTGTTGGATTTACAAAGCATTTTTGATCCacaatattcaatacaacaacaacaacatcagcagcagcagcagcagcagcagcagcagcaacaattgcaaattcATTTATCatcagagcaacaacaacaacaacaacaacgcactTCAACGAAATTTGATCTAAGCATTTTCAACGATTTCGACCAAATggaattcaacaacaacaacttgaatcgaaatcatcataatcagtatcagaataataataataataacagtaatagcaataataataataataataatagtagcatcaataacaataataataacaacaaccacaataccaatagcaacaacaacaacaacattcatACGCACCAAACTAACGGAGAAAATCTTAATCAGatccAAAATAGTCATTTCATTAGCGgctatcatcatcagcatatTGGATCGGATTATGAGCCAGTGATTAACTTTGTTGATTCACCACCAAACTCTGAGGAATCTTGGACAGACGGACAGTCCAAGGATTCACCAGGACCGCAAATTATCGACGTGAGGACAATTTACTCAGACAGTGGTTCGCGCAAAAGACGAATGGATTGGTACTCATTGGACATCGGTCAAAGTGAAAATTCACCGACAACTCAATCAGGCGAAATACCCAATAAGGTGGCACATCACGAGAAGGATAAACATAAACGTGAAAAGCATTCagGTCGCAGCAGTTGGAGCGACGATATAGGCTTTGATCTGAACGCCGAGTTCAATAGCAACTCATATTTGAACAATGAAAACTTTTTATCGTTCTCCCCGAGCCTGACGGCACTTAAACAGGAGCCGCAAACGGAGCAGCTCAAACCAAACGCAAAGATATCCTTGGAGAGCGGCAGCAATAGTTCCGCAATTGGCAAAAGCGATAAATCGCCATTGGGCGAGGCAAATCATTCACCACAGCGCACGGGTCAGgaggtagcagcagcaacagcagcagcagcagcagcggcggcagcggcaacatcaGGAACTGGAGGCggagcagttgcagcagctggtgGCAAGCATGAGTTGAACCCCGGCAACatttgtggctgtggctcgCCGCAAGGCTCGCCCGCCGCAGCGgattttgaattgaattgcaatGCCAATGGGAACGAAGCATCATCGGCTGAGAAAACCCGAGCTGCATCTGGCAATGAGGCCTATGGACAGGCACAGGCGCCGCGCTCtggactgcagcagcagctgagcgtTGTCGAGGCAGCCAAAATTGAGCCCAGCTCGTCAGGCGGTGCATCTCATGCAGAGGATCATAAATTTCAGTACATTTTGGCAGCGGCCACCTCAATTGCAACGAAGAACAATGAGGAGACATTGACATATCTGAATCAGGGTCAAAGCTATGAGAtcaaattgaagaaaattgGTGATTTATCTTTCTATCGCGATAAGATTTTGAAGAGCGTTATCAAAATCTGTTTCCACGAGCGTCGCTTGCAGTTTATTGAACGCGAACAGATGCAACAATGGCAGGCATCGCGTCCAGGTGATCGAATTATTGAGGTAGATGTACCATTGTCGTATGGCCTGTGCCATGTGTCGCAGCCACTGAGCGCGAATGCATTGAATACTGTCGAAATCTTTTGGGATCCATTGAAGGAGGTCGGTGTTTACATCAAGGTTAATTGCATTTCCACTGAATTTACACCAAAGAAACACGGTGGAGAAAAGGGTGTACCATTTCGACTACAAATTGAAACctatatagaaaatacaacagcagctaattgtaatagcaacaataataacaacaacaacaacaccaatagcagctcgagcagcagcagcaacagcagctccagcagcagcagcaccagcagcaacaacaacagcccgGGCAACAACAACCCAAGCAATAcaactagcaacaacaacaacggatCAGGCATTACCTCGGCGGGGCAGACGGATAATCGGaatgcaaacagcagcaacatcgccGGCCTGGCAACACTCAATGGCAAACAGGCGGTGCATGCAGCTGCCTGTCAGATAAAGGTCTTCAAGCTAAAGGGCGCCGATCGCAAGCATAAACAGGATCGCGAAAAGATCCAGAAGCGTCCGCAATCAGAGCAGGACAAGTTTCAGCCCAGCTACGAGTGCACCATCATGAATGATATATCATTGGATTTGATAACGCCAGCCACCACAACTGGCTGCTACAGTCCCGAATATATGAAATTGTGGCCAAATTCGCCGGTGCATATACCAAAATATGATGGAatgttgccatttgccagcAGCGCATCACCGGcggccagcagcagcccaaTTGCTATCAATTCGGTGACATCCACAAATTCGCCAACATTGAAACTAATGGATGCCACAAACATGGTGTCGCCGCAGCATGTGCCAGCGGATATGGATGATTATaaTCAGAACATAATGCCCGAATCAACGCCCGCACAAGTCACACAATGGCTGACACATCATCGTCTGACGGCCTACCTCAATACCTTTGCCCATTTCTCGGGCGCGGATATTATGCGCATGTCCAAAGAGGATCTAATACAAATCTGTGGACTCGCCGATGGCATACGCATGTTTAATATCTTGCGCGTCAAAACCATTGCGCCTCGTCTGACACTCTATGCCAGCATGGATGGCTGCAGCTACAATGCCATCTACTTACTCTCCAATACCGCCAAGGAGTTGCAGCAGAAAATCTATAAGCTGCCCGGTTTCTATGAGTTCATGGCTAAGGGCGGCTCGGCTGGCCTCTTGGAGAATGGCGctctatACAATAATTGGGGCATGCACTCGAAATATTCCGGCAGCGGTTCGAACATCTTCAATGAGGTGAACAAGAGTTGCGTCTACATATCGGGGCCATCGGGCATACATGTGAGCGTCAGCGATGAGGTGCTCAACAATGAGGTGAAGGACGGCAGTCTCTATGCCCTCGATGTGCAGGCTGGCAAAGTTATATTGAAGCTGATCAATAAGCAggataacaattaa
Protein Sequence
MALSFLSQSSGLLDLQSIFDPQYSIQQQQHQQQQQQQQQQQQLQIHLSSEQQQQQQQRTSTKFDLSIFNDFDQMEFNNNNLNRNHHNQYQNNNNNNSNSNNNNNNNSSINNNNNNNNHNTNSNNNNNIHTHQTNGENLNQIQNSHFISGYHHQHIGSDYEPVINFVDSPPNSEESWTDGQSKDSPGPQIIDVRTIYSDSGSRKRRMDWYSLDIGQSENSPTTQSGEIPNKVAHHEKDKHKREKHSGRSSWSDDIGFDLNAEFNSNSYLNNENFLSFSPSLTALKQEPQTEQLKPNAKISLESGSNSSAIGKSDKSPLGEANHSPQRTGQEVAAATAAAAAAAAAATSGTGGGAVAAAGGKHELNPGNICGCGSPQGSPAAADFELNCNANGNEASSAEKTRAASGNEAYGQAQAPRSGLQQQLSVVEAAKIEPSSSGGASHAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFIEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLSANALNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENTTAANCNSNNNNNNNNTNSSSSSSSNSSSSSSSTSSNNNSPGNNNPSNTTSNNNNGSGITSAGQTDNRNANSSNIAGLATLNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQDKFQPSYECTIMNDISLDLITPATTTGCYSPEYMKLWPNSPVHIPKYDGMLPFASSASPAASSSPIAINSVTSTNSPTLKLMDATNMVSPQHVPADMDDYNQNIMPESTPAQVTQWLTHHRLTAYLNTFAHFSGADIMRMSKEDLIQICGLADGIRMFNILRVKTIAPRLTLYASMDGCSYNAIYLLSNTAKELQQKIYKLPGFYEFMAKGGSAGLLENGALYNNWGMHSKYSGSGSNIFNEVNKSCVYISGPSGIHVSVSDEVLNNEVKDGSLYALDVQAGKVILKLINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00803364;
90% Identity
iTF_00544232;
80% Identity
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