Basic Information

Insect: Drosophila malerkotliana
Gene Symbol: PAXBP1_1
Assembly: GCA_018153235.1
Location: JAECXV010000008.1:12187044-12190582[+]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.4e-31 3.5e-27 95.5 1.6 4 272 614 821 611 823 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.4e-31	3.5e-27	95.5	1.6	4	272	614	821	611	823	0.94

Sequence Information

Coding Sequence: ATGTCGCTATTTCGTAAGCCAAAGAAAATCCAGCGTCGTGTATTTTCCAGCAATGCCGACGAGGAAGAAGGTGGGGCGTCGCTGGATCCGGACGCCGAAATGGAGGCGCCTCCGCCACCCATAATCACTGGAAAGCGGGACAAAGAGAAGAGCCGGAAGCCAATAAAATCACTGGATGATACCAAACCCAAGGCTTTGCTTAGCTTTGCGGATGACGAGGACGATGGTGAAGTGTTCCAAGTGCGAAAGTCGTCGCACAGCAAGAAAGTGATGCGTATGATGGACAAGGAGCGGCGAAAGAAAAAACGCGAGGAACGGGCGGAGAACAGCGGGCAGGGAGGCGGCGAAAATGGTAGTACACAGCATTTAGAGTCGTCTTCGGGTTACGGCAATCCACATTCGGATGGTGGCGTTGGCCGATACAAAGGTGCCAGCGATCAGAGTAAAAGTAAAAAAAGTGATAATCATATGATCCAAACCGAAATACGCACAGACGACTTTGTGCTAGTGGTAAAGAAATCAGAGACACCAGAGGCAATCTTAAATGGACGTGCCGCCCTCTGCGCCGGACGAGATGACTTGAGCGATGAGGACCAATCCGAAGATGGTGGCCAAGACAAATCGCATCACCGTTTCTCTAAACCGGAACATCTGAAGCAAATGTTGGAAAGCGGTTCTATTCCTGATGCAGCTATGATTCACGCCGCCCGGAAACGACGTCAACGTGCTAGAGAACAGGGGGCTGGCGACTTCATACCCATCGAGGAGCCAAAAGAGCAACCGAAGTTAAGCACACGCCTGCCTTGTGAGGATGTAGAGGGAGACCAGTCTGATGACGAGGAGCGCATGGACATGAACGACATAACTGGACGCAAGGAACGAGAAGAGCGACGCGAGCAATTCTATGCAGTCGAAAATGATTCCACTGATGAGGACACTGACCGCGAGATGAACGAATGGGAGAACCAGCAGATTCGCAAAGGCGTCACAGGGGCACAGTTAGTCCATTCCCAACACGAGTCGGTGCTTTCCCGCTTTATAATAAAGCCATCCATGACGAGTAGCGGAGGTGTCATAGATGATTCTGAGCCCCTACCCCCACAGTCTACGTCCACGCTGCTGGAAAAGGCCTACGCCAAAAACGCCTTGGAACGTAGCAATTTAGCCACGGCAGTTCGATCAGCTTCCAAGTCGAAAAAAGAAAAGGGAAAACCCGCCACATTACGGACGCCTCAGGAGATCTTCGAGGCCATCAAATCGCGACTCACTGAACTAAAAGAAAGATCGGCGGATCACAGTGCCAGCATAGACAGAATCAGCACCGAACTAAAGTCCCTGAAGCTCCAGCAATTAGAATGCCAACAGAATGCTCCTACAGCAGCGGCCAAGTACAAATTTTATCAGGAGGTCAAGTGCTACGTTAAGGACTTGGTCGACTGCCTCGCCGAGAAAACGCCACTGATTAACGACCTGGAAAAGAGGGCTCTGCAGCAATACGGAAAGAACCAGCGATATTTAGTAAACCGAAGGCGTCAAGATGTTCGAGATCAAGCAAAGGAAATAGCCGAGGCATCAAAACCCATCTCAGCAGCTGCCCGTCGAACTCCCGAATACGAAGAGCAAGTCCGCCGTGCCGCGGAAAGGGAGGGACGACGGACGCGTCGGAGATGTGAACGCGAACGTAAGGACCTCCTTTCCTCCCATTTGGACGGCATGTCCAGCGACGACGAGATCCCCGACCAGCAACAGGAGCAAAGTGTAGCTGCCTCGGCACAAATTGAATCTCAATCGTTAGAGGCCTTCGAGGATGTCACAGATGATTTCTGCAAAGTGGAACTAATTTTAATGAAGTTCTATGCGTGGCGAAAAACAGACATGTCCTCGTATCAGGACGCGTTTGTTAGCCTGTGCCTTCCTAAGGTTTTGGCGCCACTGGTGCGTCATGAAATGCTGTTATGGTCACCAATGCTGGACGAGTATGCCGATATCGAGAATATGCGGTGGTATCAAGCCTGTATGTTATATGCCTGCCAACCTGATGAAACATTGGAACAATTAAAAAGTGATCCAGATGTAAATTTGGTGCCAGCATTAGTTGAGAAAATTGTGTTACCCAAACTAACAGTCCTAGTTACGGAGAGTTGGGACCCGTTGTCTACCACGCAAACCCTGCGCCTGGTGGGCTTTATAAATCGACTGGGGCGAGAGTTTCCTCTAAGTGGAACCAACAAGCAGCTCAACAAACTTTTTGAATCAATTATGGAGCGCATGAGATTGGCCCTTGAAAATGATGTATTTATACCCATCTTTCCCAAGCAAGTACAAGAAGCAAAGACATCGTTCTTCCAGCGCCAATTCTGCAGCGGGCTCAAGCTCTTCCGCAACTTTCTTAGCTGGCAGGGCATTCTAGCTGATAAGCACCTGCGCGAACTGGCCATTGCATCGTTATTGAATCGCTACCTGCTTTTGGCCATGCGCGTTTGTACTCCAAACGATGCCATCAACAAGGCATATATAATTGTGAATACCCTTCCAACTGTTTGGCTATTACCCAACAGCGATACCCTCAAGAACTTGGAGCTTTTTATTAATTACATTAAGCAAACTTTAGAGAGCTGTGATGCCACCAATCCAGTTTTTATACAATCCAGCGATAAGGCCAAGCAAATTCTTCAAAGACTTCATAGTTTATAA
Protein Sequence: MSLFRKPKKIQRRVFSSNADEEEGGASLDPDAEMEAPPPPIITGKRDKEKSRKPIKSLDDTKPKALLSFADDEDDGEVFQVRKSSHSKKVMRMMDKERRKKKREERAENSGQGGGENGSTQHLESSSGYGNPHSDGGVGRYKGASDQSKSKKSDNHMIQTEIRTDDFVLVVKKSETPEAILNGRAALCAGRDDLSDEDQSEDGGQDKSHHRFSKPEHLKQMLESGSIPDAAMIHAARKRRQRAREQGAGDFIPIEEPKEQPKLSTRLPCEDVEGDQSDDEERMDMNDITGRKEREERREQFYAVENDSTDEDTDREMNEWENQQIRKGVTGAQLVHSQHESVLSRFIIKPSMTSSGGVIDDSEPLPPQSTSTLLEKAYAKNALERSNLATAVRSASKSKKEKGKPATLRTPQEIFEAIKSRLTELKERSADHSASIDRISTELKSLKLQQLECQQNAPTAAAKYKFYQEVKCYVKDLVDCLAEKTPLINDLEKRALQQYGKNQRYLVNRRRQDVRDQAKEIAEASKPISAAARRTPEYEEQVRRAAEREGRRTRRRCERERKDLLSSHLDGMSSDDEIPDQQQEQSVAASAQIESQSLEAFEDVTDDFCKVELILMKFYAWRKTDMSSYQDAFVSLCLPKVLAPLVRHEMLLWSPMLDEYADIENMRWYQACMLYACQPDETLEQLKSDPDVNLVPALVEKIVLPKLTVLVTESWDPLSTTQTLRLVGFINRLGREFPLSGTNKQLNKLFESIMERMRLALENDVFIPIFPKQVQEAKTSFFQRQFCSGLKLFRNFLSWQGILADKHLRELAIASLLNRYLLLAMRVCTPNDAINKAYIIVNTLPTVWLLPNSDTLKNLELFINYIKQTLESCDATNPVFIQSSDKAKQILQRLHSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00919050;
90% Identity: iTF_00615552;
80% Identity: -