Basic Information

Insect: Drosophila lutescens
Gene Symbol: -
Assembly: GCA_037075285.1
Location: JBAMCF010000247.1:204967-207194[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.087 7 7.6 0.1 1 23 338 361 338 361 0.96

2 10 1.6 1.3e+02 3.6 0.2 6 23 371 388 371 388 0.97

3 10 2.3e-05 0.0019 18.8 0.5 1 23 394 416 394 416 0.98

4 10 0.00023 0.018 15.7 0.5 1 23 431 454 431 454 0.93

5 10 0.00054 0.043 14.6 0.7 1 23 462 485 462 485 0.97

6 10 4e-05 0.0032 18.1 1.6 3 23 493 514 491 514 0.92

7 10 0.0013 0.11 13.3 0.4 2 23 526 548 525 548 0.97

8 10 0.00067 0.054 14.3 7.1 1 23 555 578 555 578 0.93

9 10 2.9e-06 0.00024 21.7 0.8 1 23 584 606 584 606 0.98

10 10 8.2e-05 0.0066 17.1 1.3 1 23 612 635 612 635 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.087	7	7.6	0.1	1	23	338	361	338	361	0.96
2	10	1.6	1.3e+02	3.6	0.2	6	23	371	388	371	388	0.97
3	10	2.3e-05	0.0019	18.8	0.5	1	23	394	416	394	416	0.98
4	10	0.00023	0.018	15.7	0.5	1	23	431	454	431	454	0.93
5	10	0.00054	0.043	14.6	0.7	1	23	462	485	462	485	0.97
6	10	4e-05	0.0032	18.1	1.6	3	23	493	514	491	514	0.92
7	10	0.0013	0.11	13.3	0.4	2	23	526	548	525	548	0.97
8	10	0.00067	0.054	14.3	7.1	1	23	555	578	555	578	0.93
9	10	2.9e-06	0.00024	21.7	0.8	1	23	584	606	584	606	0.98
10	10	8.2e-05	0.0066	17.1	1.3	1	23	612	635	612	635	0.97

Sequence Information

Coding Sequence: ATGTCGGCCTGCGTCCTTTGCCTATCCACCACCTATGCCGGCCACCTCCTGCAGTCGCCGGAGGGCGTCCGCCAGAACATAAGGGCGACTATCATTAAACACTTTTCGTTCTCTGAGGTCCTGACGGCGGGCAAGGATGCGTCGGTCTGCCGGGAGTGCTGGGCCTGCGTCAGCAGCTTCGAGGAGTTTCACCAGCGGGTCTCCGGCCTGCACCAGGTGGCCACAAGGAGCAGCGACTCCAAGAGCGTGCCCATCGAGTTCTGCGGCCAGACGGAGGTAGAGGTGGAGGTGGCCACCAATCCGCTGCTCTCCGCCGAATTGGACGCCCTGGCCGAGGGCTTCTTTGCTCCCAGCGAAGTCAAGGTGGAAGTGAACGAACTGGAGCCCCTGCCCAAGGTGGAACTCCTGGAGGACCCGGTTGACACGGAAACCAGACCTGCTACCAAGCGGCGTGGCTCCCAAAACGACGGTTCTCCGCACCCAAAGCGGCGCATTAAAAACGAACGGCCAGTGGACAGTGACTCGGATGCTCCCCTAGCGGACTTCCTCTCCGACATCAAGACAAGCTCCAATGGACCAGCTAAGGCCATCGAATCAACCAAGGGCCGCCCGCTGCGAAGGAGTACGCGGCGTGGTCGTCCGCCCAAGGCCAAACCTGAACCGCCTGCTTCCCCCAAGATAGAACTAGACTCCGACGAAGGCGACGACGTAGACGATGCCAGGGACAACAATGACATGGAGTTTGTGGCTCCCGAGGCCGTCCTAGGCACGGACGACAGCGGTAGCTCGTCCAGCGATAGCAGTGGTGAGGATTCCGACCACAGTCTACCAGACATTGAGCCCGAAGAGCGTTACGCCGAGATTCCCAAGCGGGTGGTGGTGAAGCCCAAGAAATACCGCAAGCGCGAGAAGCCCCTGGTGCCACCCGTTCGCCTCAGTCGGGAGGAGATCGAGCGACGGAAACTCCAGCAGAGCGAGTACGATGAGATTATCCTGCAGTTCTTCAAGAAGTTCCCCTGCGCCATCTGCAATCTGCTGGTGCAGAACTTTGCCGACATGCGACGCCATCAACGCGTCTCGCACAACATCGAATCTGGCTGGATCCAGTGCTGCGGGCGCAAGTTCCACATCCGCAAGGCTTTGGCGGAGCACGTGCTGGTCCACAAGAATCCAGAGCACTTTATGTGCTCCCAGTGCGGTCGGGTGTTCCAGGACTCGCGCACCCTCGAGATTCACGAGCAGACGCACACAAATCCGGAGGTGAAGTCGGAGCCAAAGGAGAAGCCCGTCTACCAGTGCGAGAAATGCCCCAAGAGCTTCATCACCAAGGCGGCCATTGAGTACCACTACGTGTCCAAGCATGTCCCCAAGTCAGAGTTCAAATACTCCTGTCCGGAGTGCAACAAGAAAATTCCCACGGAGCGCAAACTGAAAGAGCACTTGAAATACATGCACGACCCGGAAACGGCCATCATCTGCGATAAGTGCGGCAAGACGCTTCGCTCACAAACGAATCTCAAAAAGCACCACGAGCTGGAACATTCCGAGGAGCCGCGTCCCAAGCCCGATCCCGTGCAGTGCGAGATATGCGGCACCTGGCTGCGCCACCTCTCCGGACTGAAGCAGCACATGAACACGGTGCACGAGCCGCCGGGCGGAGAGCACCGCTGTCACATCTGCAACAAGACATCCACCAATTCTAGGGCCCTCAAGCGCCACATCTACCACAACCATCTGTGCGAACGCAAGTTTAAGTGCGGGATGTGCGAAAAGGCCTTCAAGCGACCCCAGGATCTGAGGGAACACACATCCACCCACACCGGCGAGGTTCTATACACCTGCCCCAATTGCCCGATGACGTTCTTTTCCAACGCCAACATGTACAAGCACCGCCAGCGACTCCATCGTGCCGAATGGGAGGCGGATCGCAAGAAGCCACTGCCGCCGAACATCATGAAGATTTCGCAGGGCGCCACCTCGGCGATGAAGAAGCGCCAGACGACAGGCGTTGCCCTGTTCCCACAGTCGCAAGAACAGAAGCAATAG
Protein Sequence: MSACVLCLSTTYAGHLLQSPEGVRQNIRATIIKHFSFSEVLTAGKDASVCRECWACVSSFEEFHQRVSGLHQVATRSSDSKSVPIEFCGQTEVEVEVATNPLLSAELDALAEGFFAPSEVKVEVNELEPLPKVELLEDPVDTETRPATKRRGSQNDGSPHPKRRIKNERPVDSDSDAPLADFLSDIKTSSNGPAKAIESTKGRPLRRSTRRGRPPKAKPEPPASPKIELDSDEGDDVDDARDNNDMEFVAPEAVLGTDDSGSSSSDSSGEDSDHSLPDIEPEERYAEIPKRVVVKPKKYRKREKPLVPPVRLSREEIERRKLQQSEYDEIILQFFKKFPCAICNLLVQNFADMRRHQRVSHNIESGWIQCCGRKFHIRKALAEHVLVHKNPEHFMCSQCGRVFQDSRTLEIHEQTHTNPEVKSEPKEKPVYQCEKCPKSFITKAAIEYHYVSKHVPKSEFKYSCPECNKKIPTERKLKEHLKYMHDPETAIICDKCGKTLRSQTNLKKHHELEHSEEPRPKPDPVQCEICGTWLRHLSGLKQHMNTVHEPPGGEHRCHICNKTSTNSRALKRHIYHNHLCERKFKCGMCEKAFKRPQDLREHTSTHTGEVLYTCPNCPMTFFSNANMYKHRQRLHRAEWEADRKKPLPPNIMKISQGATSAMKKRQTTGVALFPQSQEQKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00507782;
90% Identity: iTF_00605769; iTF_00578732; iTF_00548251; iTF_00581723;
80% Identity: -