Basic Information

Insect: Drosophila prostipennis
Gene Symbol: -
Assembly: GCA_037075205.1
Location: JBAMCJ010006345.1:784174-786387[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.086 6.8 7.6 0.1 1 23 336 359 336 359 0.96

2 10 1.6 1.2e+02 3.6 0.2 6 23 369 386 369 386 0.97

3 10 2.3e-05 0.0018 18.8 0.5 1 23 392 414 392 414 0.98

4 10 0.00023 0.018 15.7 0.5 1 23 429 452 429 452 0.93

5 10 0.00053 0.042 14.6 0.7 1 23 460 483 460 483 0.97

6 10 4e-05 0.0032 18.1 1.6 3 23 491 512 489 512 0.92

7 10 0.0013 0.1 13.3 0.4 2 23 524 546 523 546 0.97

8 10 0.00066 0.052 14.3 7.1 1 23 553 576 553 576 0.93

9 10 2.9e-06 0.00023 21.7 0.8 1 23 582 604 582 604 0.98

10 10 8.2e-05 0.0064 17.1 1.3 1 23 610 633 610 633 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.086	6.8	7.6	0.1	1	23	336	359	336	359	0.96
2	10	1.6	1.2e+02	3.6	0.2	6	23	369	386	369	386	0.97
3	10	2.3e-05	0.0018	18.8	0.5	1	23	392	414	392	414	0.98
4	10	0.00023	0.018	15.7	0.5	1	23	429	452	429	452	0.93
5	10	0.00053	0.042	14.6	0.7	1	23	460	483	460	483	0.97
6	10	4e-05	0.0032	18.1	1.6	3	23	491	512	489	512	0.92
7	10	0.0013	0.1	13.3	0.4	2	23	524	546	523	546	0.97
8	10	0.00066	0.052	14.3	7.1	1	23	553	576	553	576	0.93
9	10	2.9e-06	0.00023	21.7	0.8	1	23	582	604	582	604	0.98
10	10	8.2e-05	0.0064	17.1	1.3	1	23	610	633	610	633	0.97

Sequence Information

Coding Sequence: ATGTCGGCCTGCGTTCTTTGCCTGTCCACCACCTATGCCGGCCACCTGCTGCAGTCGCCGGAGGGCGTCCGCCAGAACATTAGGGCGACCATCATTAAACACTTTTCCTTCTCCGAGGTCCTGACGGCGGGCAAGGATGCCTCGGTGTGCCGGGAGTGCTGGGCCTGCGTGAGCAGCTTCGAGGAGTTCCACCAGCGGGTCTCCGGCCTGCACCAGGTGGCCACCAGGAGCAGCGACGCCAAGAGCGTGCCCATCGAGTTCTGCGGCCAGACGGAGGTAGAGGTGGAGGTGGCCACCAATCCGCTGTTCTCCGCCGAACTGGACGCCCTGGCCGAGGGCTTCTTTGCCCCCAGCGAAGTCAAGGTGGAGGTGAACGAACTGGAGCCGCTGCCCAAGGTGGAACTCCTGGAGGACCCTGTTGACACGGAAACCAAACCTGCTACCAAGCGGCGGGGCTCCCAGAACGACGGTTCGCCGCACACAAAGCGGCGCATCAAAAACGAACGGCCAGTGGACAGTGATTCGGATGCTCCTCTAGCGGATTTCCTGACCTCCAGCTCCAATGCACCAGCTAAAGCCAACGAATCGACGAAAGGCCGCCCGCTGCGAAGGAGCACGCGGCGTGGTCGTCCGCCCAAGGCCAAACCAGAGCCGCCTGCTTCCCCCAAGAAGGAACTGGACTCCGACGATGACGACCACGACGTAGACGATGCCAGGGACAACAATGACATGGAGTTTGTGGCTCCCGAGGCCGTCCTGGGCACGGACGACAGCGGCAGCTCGTCCAGCGATAGCAGTGGCGAGGATTCGGATCACAGCCTGCCGGATATTGAGCCCGAGGAGCGGTATGCCGAGATTCCCAAGCGGGTGGTGGTGAAGCCCAAGAAGTACCGCAAGCGCGAGAAGCCGCTGGTGCCGCCCGTTCGCCTCAGCCGCGAGGAGATCGAGCGCCGGAAGCTCCAGCAGAGCGAGTACGATGAGATTATCCTGCAGTTCTTCAAGAAGTTCCCCTGCGCCATCTGCAACCTGCTGGTGCAGAACTTTGCCGACATGCGACGCCATCAGCGCGTCTCGCACAACATCGAATCTGGCTGGATCCAGTGCTGCGGGCGCAAGTTCCACATCCGCAAGGCCTTGGCGGAGCACGTGCTGGTCCACAAGAACCCCGAGCACTTTATGTGCTCCCAGTGCGGTCGGGTGTTCCAGGACTCGCGCACCCTGGAGATTCACGAGCAGACGCACACGAATCCCGAGGTGAAGACGGAGCCAAAGGAGAAGCCCGTCTACCAGTGCGAGAAATGCCCCAAGAGCTTCATCACCAAGGCGGCCATAGAGTACCACTACGTGTCCAAGCATGTGCCCAAGTCCGAGTTCAAATACTCCTGTCCGGAGTGCAACAAGAAAATCCCCACGGAGCGCAAACTGAAGGAGCACTTGAAGTACATGCACGACCCGGAAACGGCCATCATCTGCGATAAGTGCGGCAAGACGCTACGCTCACAAACGAATCTCAAGAAGCACCACGAGCTGGAGCATTCCGAGGAGCCGCGTCCCAAGCCCGATCCCGTGCAGTGCGAGATTTGCGGCACCTGGCTGCGCCACCTCTCCGGCCTGAAGCAGCACATGAACACGGTGCACGAGCCGCCGGGCGGAGAGCATCGCTGTCACATCTGCAACAAGACATCCACCAATTCCAGGGCCCTCAAGCGCCACATCTACCACAACCATTTGTGCGAGCGCAAGTTCAAGTGCGGGATGTGCGAGAAGGCCTTCAAGCGACCGCAGGACTTGAGGGAACACACATCCACCCACACCGGCGAGGTTCTCTACACCTGCCCCAATTGCCCCATGACGTTCTTTTCGAATGCCAACATGTACAAGCATCGCCAGCGACTCCATCGCGCCGAATGGGAGGCGGACCGCAAGAAGCCGCTGCCTCCGAACATCATGAAGATTTCGCAGGGCGCCACCTCGGCGATGAAGAAGCGCCAGACGACAGGCGCTGCCCTGTTCCCACAGTCGCAGGAACAGAAGCAATAG
Protein Sequence: MSACVLCLSTTYAGHLLQSPEGVRQNIRATIIKHFSFSEVLTAGKDASVCRECWACVSSFEEFHQRVSGLHQVATRSSDAKSVPIEFCGQTEVEVEVATNPLFSAELDALAEGFFAPSEVKVEVNELEPLPKVELLEDPVDTETKPATKRRGSQNDGSPHTKRRIKNERPVDSDSDAPLADFLTSSSNAPAKANESTKGRPLRRSTRRGRPPKAKPEPPASPKKELDSDDDDHDVDDARDNNDMEFVAPEAVLGTDDSGSSSSDSSGEDSDHSLPDIEPEERYAEIPKRVVVKPKKYRKREKPLVPPVRLSREEIERRKLQQSEYDEIILQFFKKFPCAICNLLVQNFADMRRHQRVSHNIESGWIQCCGRKFHIRKALAEHVLVHKNPEHFMCSQCGRVFQDSRTLEIHEQTHTNPEVKTEPKEKPVYQCEKCPKSFITKAAIEYHYVSKHVPKSEFKYSCPECNKKIPTERKLKEHLKYMHDPETAIICDKCGKTLRSQTNLKKHHELEHSEEPRPKPDPVQCEICGTWLRHLSGLKQHMNTVHEPPGGEHRCHICNKTSTNSRALKRHIYHNHLCERKFKCGMCEKAFKRPQDLREHTSTHTGEVLYTCPNCPMTFFSNANMYKHRQRLHRAEWEADRKKPLPPNIMKISQGATSAMKKRQTTGAALFPQSQEQKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00507782;
90% Identity: iTF_00536960;
80% Identity: -