Dkun008658.1
Basic Information
- Insect
- Drosophila kuntzei
- Gene Symbol
- lrrfip2
- Assembly
- GCA_035042165.1
- Location
- JAWNLU010001310.1:34124-44550[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-118 1e-113 379.7 25.9 1 299 3 291 3 292 0.98 2 2 0.016 3.2e+02 0.5 3.3 208 241 309 341 294 365 0.65
Sequence Information
- Coding Sequence
- atgcagGCAGAAGCGCGTCTAGCAGCTCGTCGTCAAGCACGTGTTGAAGCTCGCGAGATACGCATGCGAGAGCTTGAGCGGCAACAAAAAGAACAGGAGCAAAATGCAGACCGAGCCTTTGATATGCAAAATATCAGCGGCAGTGTTATTCACGATACACATCCTACACGTCTCGCCTACGGTGGTCTTCTAAACTTGACGCGTGCAGCAGCTTCGCGCCGCAGTAGTGAGGATTCATTAGAAGAGGAGGGTCGCAGCTTGCGTGACATTAAGCATGAACTTAAAGAAGTCGAGGAACGTTTTCGCAAGGCAATGATAACAAATGCTCAATTGGACAATGACAGGTCATCTCAAACTTATGAAGTCAAATTACTGAAGGATAAAAGCGAAACAATACAAGAGTCTTTTGCACAACTACAGCGCGagcttaaaaacaaattgcggGATTGTAACGCACTCAAACGTAATTTGGACCGAACAACACTTGAATTGAGTTTGGTTCAAGGTCAATTAACCGAACGTGATGCGCTTATAGCTGAACATGGTCTTGTTATTGTAGCCATTGAGAATACGGACGGTAGTGATGCCAAAAGGGCATTAGTTAGTGTTGAAAATGCCAATATTTTGGCGACCGTTCAGGGATCACTTGATGTAAGACTCAAAAAGTTTACAGAGGAAAGACAACGACTTTTAATGGAAGTGCACATGTTGAATGAGAAGTTGGatgcttttaaaaatgaagGCAGAACCGGTCGCTGTAGTTCGTTAAATGGCTCCTTGGGTTATGACGATGATTATGATGTACAAAGAGAAGCTAATAAGATTGTATcagattataaatataaactgcaAAAGGCTGAGCAGGAAATCGCTAATCTACAAGCAAGCTTATCACGTTCGGAAACGCAAGTTATTCGATATAAAAGCACGGCAGAAGCAGCGGAGAAAGTAGAGTCAGAATTGAAAGTGGAACGTCGCAAACTGCAACGTGAGCATCGCGAGATTTTGGAGCGTCTCGAAGAAGCAGAAACTGCAAATAACCATCTACTAAAACGTCTTGATAAACTAAAGAATGCAAAAAGTACGATCTTAAAGGATTTATGA
- Protein Sequence
- MQAEARLAARRQARVEAREIRMRELERQQKEQEQNADRAFDMQNISGSVIHDTHPTRLAYGGLLNLTRAAASRRSSEDSLEEEGRSLRDIKHELKEVEERFRKAMITNAQLDNDRSSQTYEVKLLKDKSETIQESFAQLQRELKNKLRDCNALKRNLDRTTLELSLVQGQLTERDALIAEHGLVIVAIENTDGSDAKRALVSVENANILATVQGSLDVRLKKFTEERQRLLMEVHMLNEKLDAFKNEGRTGRCSSLNGSLGYDDDYDVQREANKIVSDYKYKLQKAEQEIANLQASLSRSETQVIRYKSTAEAAEKVESELKVERRKLQREHREILERLEEAETANNHLLKRLDKLKNAKSTILKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00336724;
- 90% Identity
- iTF_00472354;
- 80% Identity
- -