Basic Information

Insect: Drosophila kikkawai
Gene Symbol: -
Assembly: GCA_018152535.1
Location: NW:6720586-6724423[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.013 0.79 10.0 2.6 3 23 322 343 320 343 0.95

2 17 0.24 15 6.0 0.1 1 23 350 375 350 375 0.94

3 17 0.069 4.1 7.8 4.0 2 23 386 407 386 407 0.93

4 17 0.042 2.5 8.5 0.1 3 23 448 469 447 469 0.95

5 17 0.0039 0.23 11.7 0.4 3 23 477 497 475 497 0.95

6 17 0.001 0.061 13.5 0.2 1 23 505 528 505 528 0.98

7 17 0.0058 0.34 11.2 0.3 2 23 533 554 532 554 0.97

8 17 0.00011 0.0066 16.6 0.7 1 22 602 623 602 626 0.91

9 17 0.34 20 5.6 1.4 3 21 633 651 633 652 0.90

10 17 0.0034 0.2 11.9 0.6 1 23 671 696 671 696 0.97

11 17 0.22 13 6.2 1.3 2 23 714 736 713 736 0.93

12 17 0.007 0.42 10.9 0.5 2 23 742 764 741 764 0.92

13 17 0.017 1 9.7 0.2 2 23 768 790 767 790 0.95

14 17 7.2e-05 0.0043 17.2 0.6 1 23 796 818 796 818 0.97

15 17 0.0082 0.49 10.7 0.9 1 23 822 845 822 845 0.93

16 17 9.3e-06 0.00055 20.0 0.9 1 23 851 874 851 874 0.97

17 17 2.2e-05 0.0013 18.8 0.2 2 23 879 906 878 906 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.013	0.79	10.0	2.6	3	23	322	343	320	343	0.95
2	17	0.24	15	6.0	0.1	1	23	350	375	350	375	0.94
3	17	0.069	4.1	7.8	4.0	2	23	386	407	386	407	0.93
4	17	0.042	2.5	8.5	0.1	3	23	448	469	447	469	0.95
5	17	0.0039	0.23	11.7	0.4	3	23	477	497	475	497	0.95
6	17	0.001	0.061	13.5	0.2	1	23	505	528	505	528	0.98
7	17	0.0058	0.34	11.2	0.3	2	23	533	554	532	554	0.97
8	17	0.00011	0.0066	16.6	0.7	1	22	602	623	602	626	0.91
9	17	0.34	20	5.6	1.4	3	21	633	651	633	652	0.90
10	17	0.0034	0.2	11.9	0.6	1	23	671	696	671	696	0.97
11	17	0.22	13	6.2	1.3	2	23	714	736	713	736	0.93
12	17	0.007	0.42	10.9	0.5	2	23	742	764	741	764	0.92
13	17	0.017	1	9.7	0.2	2	23	768	790	767	790	0.95
14	17	7.2e-05	0.0043	17.2	0.6	1	23	796	818	796	818	0.97
15	17	0.0082	0.49	10.7	0.9	1	23	822	845	822	845	0.93
16	17	9.3e-06	0.00055	20.0	0.9	1	23	851	874	851	874	0.97
17	17	2.2e-05	0.0013	18.8	0.2	2	23	879	906	878	906	0.85

Sequence Information

Coding Sequence: ATGTCGGAAAACCAGAAAAACACAAATAGCTGCCTGCATTGTACTGTTTTCAATACGAAATACCAGTACCAGGAGATCTTCGATGAGTTTGGCAGGGAGCTGGGCCTCCAAACGCTGCTGGCCAAGCATTTCCAGCTGGATGTGGCGCCCGATCCGCTCCAGCGTCAGCTCCTGTGCGAGGTGTGCGTCAACACACTCATCCGGCTGTTTGATATCGATGAACTGCACCGGCAACAGGATGCGGCGAGGGCTAGGCTCAAGGATCCCAGTCCTGTTGTCATCCTGGATTCAGTCGAGCCTGAAGTTAAGCCTGCGCAGGCTGCTGCCGCTCCCAAGAAGGAAAaggctgctcctcctcctcccttaAGGGAACCAAGTGCACGGATCAGTAAGAGAGTTCAGCCACCTCCGGTAGTGCCTGTTCCATCTAAATCGTCGGAAAGAGCCAAGGAGACGGTGAAACCCGAAAAGGAAGCATCGCCCGCCAAGCCAAAGGATGCAGATCAGGAGCATATTAGTGTACTGATACAAAACCTCCTCGATGAAGACGAGGCCATTAGCGAGGAAGTGGCAGACGAAGTTGAGTCATTTTGTGAGGAAGTAGAAGCAATTGAAGCTGCTCCCATTCCAGAGGAGCCGCAAGCCCAAAGGAAAATTGTCTTGTTGAACAAGAAAGCTGCGCGGCAACCTAGTCTAGATGAAGACATTTACATATACGAGCATGAGGATATCCTGGAGCCAGCTGTAAAGAAGGTAAAGGTCGAAGTCAAGGCTCGATCTTCAGCTAAGGAACAAGTTCAAGCGGAGGAGAGCCAAAGCGAGGGCGAAACCGAGGAGAGTCATGTGGTGCTCTTTGACTTTGTTATGATCAAAGAAAaggATGACATTGCTGACATTGCCGAGTACTTGTCCACGGTGGTAAAGACCAGCTTTGAAAAGCTAACCTTTGAATGGACCACGGCTTGCAAACACTGTTCCCAGAAGTTTCCTAACTTTGAGAGCCTTTTGAGTCACACACTAAAGTCGCATAAATCTCGAGGCAATGTCTACAAGTGTCCCATTGATGGCTGCAGCAAGGAGTTGAAGGGCAGCAAATTTCTGGCCATGCATTTGGTTGTCTTACATGCACCCGTAGCTGAAATACCCATTTATGGCAGTTGTCCGGAGTGCAAAATGACTTTTTCAAACATTTTGCATTACAACAAACACTCTTGTGCTCATATGATTAAAAAGAAGCGCGGTGTTCGCTTATTTTGTGAAATGTGTGCTCAGGAATTTCCCTCCTGGAAGCGttTTAACTTTCACAATCAATTCCATTTGGAGAAGCATAGGCCTCGTGCCTGCTTTGTCTGTGATTATGCCAGCACCAACATTGATGAGCTGTTTCAGCACTTGAACTACTCCCATGAGCCTGTGGGCACTTTATTTTGCGACCTttGCGATCGCACTTTTCGGGATCCTGGGGTGTTCATGGAGCACAATAAGTCGCATGCTAATGTGAGCAGCACTACTTATTCCTGCGGCGAATGCCTGGCAGTATTTGAGTCACGAAGTCGCCTAAATGGACACATGCGCTCTATGCATGGCAGCATAATTAGCTGCGAGCTCTGTTCCCGCGAGTTTGGTAGCGAGGCCACCTACAGCATTCACATGAAGAAGCATCTGATTATCGAGAGAGATCTGCACGTTTGCCACAATTGCGGCCTGCTAAACGATAGCCAAGAAAAAATGGCTGAACATGCAGAAACCAAGAATTCGCCCTGTTTTAAGGCCAAGATATACACGGAGATGCTACGCGATGCCTATGTCTGTGAATACTGTTCCTCGTACTTTAAGCAAAAGTCCGATTTGCAGGCACATCGCCAGTCGGGAATCCATAAGAATGGGTTGTTTTGGTGCCAGCCGTGTGGCAAGGATTTTCCCCACATGAAACTGTACCGCCATCACCTGCGCAACTATCAGAAATTGCGATCGGATTCAACGCATCGTAAGCTAGAAATTTGTGTCTTCTACATGTGCGATCAGCAGGACTGCACGGAGGCCTATGTGAACTGGAACTCGTTGTACACGCACAAGCGACGCACTCATGAATCGTCGGACAAGCAGACGGAGAAGGCCTCAAAGTCTGCTAAGGATTGGATTTGCCAGTTTTGCTTAAAGGAGTGCCGCTCAAAGATGTCCTTGTCTGTTCATGTGGCTAGGAGTCATAATAATGACAACGTCTCCTGTTCCTTGTGCAATGCCTCTTATAAAAGCCAGGATGCTTTGGACAAGCACCATGCCTACTGGCATGAGCCCATCGAGTGTCCGCAGTGCTTTAAGATTGTCAAAAATCGTCGAAATTACGACACTCATGTTAATGTTGTGCATTCAAACAAGAAACGCTATGCCTGCGGTGTTTGCGAAAAGGGTTTCTATCATAAAAGCGAAATGGAGGCTCATCAAAAGCTCCATGGCCAGTTGTACAGCTGCGAGCAATGCAGTTTTACCACAAGGAACAAGAAGTCCTTGTCGGTTCATGTCCTGGGTCAGCACTACAAGCGTTTTGCCTTTGAGTGCAAAGTGTGCAACAAGAGATTCGGACGTCGTCAGGGCCTGACTACGCACATTCAGCGGGCTCATGGCTCCAAGTACGTGTGCCGTGACTACTTCGAGGAAGGCTGCGGGCGCACCTTTGTCAGCAGTTCCCAGCTGAATGTTCATGTGCGGAAAGTGCACGAAGGCAGTATTTTTCtacaggaggaggaggaggaagaagaGGATAGCGATGGGCCATCCACATCCAAGAAGCCCTGCTATAACATCGATGATGATAGCAATATTGAGTTTGTAGAAATTGGAGACggcgaggatgaggaggagttggtggaggaagaggaggaagaATTTATTGAGGATCCCAATTTGAATACTAAACATTAA
Protein Sequence: MSENQKNTNSCLHCTVFNTKYQYQEIFDEFGRELGLQTLLAKHFQLDVAPDPLQRQLLCEVCVNTLIRLFDIDELHRQQDAARARLKDPSPVVILDSVEPEVKPAQAAAAPKKEKAAPPPPLREPSARISKRVQPPPVVPVPSKSSERAKETVKPEKEASPAKPKDADQEHISVLIQNLLDEDEAISEEVADEVESFCEEVEAIEAAPIPEEPQAQRKIVLLNKKAARQPSLDEDIYIYEHEDILEPAVKKVKVEVKARSSAKEQVQAEESQSEGETEESHVVLFDFVMIKEKDDIADIAEYLSTVVKTSFEKLTFEWTTACKHCSQKFPNFESLLSHTLKSHKSRGNVYKCPIDGCSKELKGSKFLAMHLVVLHAPVAEIPIYGSCPECKMTFSNILHYNKHSCAHMIKKKRGVRLFCEMCAQEFPSWKRFNFHNQFHLEKHRPRACFVCDYASTNIDELFQHLNYSHEPVGTLFCDLCDRTFRDPGVFMEHNKSHANVSSTTYSCGECLAVFESRSRLNGHMRSMHGSIISCELCSREFGSEATYSIHMKKHLIIERDLHVCHNCGLLNDSQEKMAEHAETKNSPCFKAKIYTEMLRDAYVCEYCSSYFKQKSDLQAHRQSGIHKNGLFWCQPCGKDFPHMKLYRHHLRNYQKLRSDSTHRKLEICVFYMCDQQDCTEAYVNWNSLYTHKRRTHESSDKQTEKASKSAKDWICQFCLKECRSKMSLSVHVARSHNNDNVSCSLCNASYKSQDALDKHHAYWHEPIECPQCFKIVKNRRNYDTHVNVVHSNKKRYACGVCEKGFYHKSEMEAHQKLHGQLYSCEQCSFTTRNKKSLSVHVLGQHYKRFAFECKVCNKRFGRRQGLTTHIQRAHGSKYVCRDYFEEGCGRTFVSSSQLNVHVRKVHEGSIFLQEEEEEEEDSDGPSTSKKPCYNIDDDSNIEFVEIGDGEDEEELVEEEEEEFIEDPNLNTKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00593985;
90% Identity: iTF_00489519; iTF_00533236;
80% Identity: -