Basic Information

Insect: Drosophila kanekoi
Gene Symbol: -
Assembly: GCA_037075305.1
Location: JBAMCE010000271.1:3787552-3791021[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 8.6e-07 5.7e-05 23.4 1.0 1 23 223 246 223 246 0.95

2 17 0.00082 0.054 14.0 2.9 1 23 253 275 253 275 0.98

3 17 0.55 36 5.1 0.5 2 23 307 328 306 328 0.94

4 17 0.0035 0.23 12.1 3.5 1 23 418 441 418 441 0.97

5 17 0.084 5.6 7.7 0.5 1 19 448 466 448 468 0.94

6 17 0.0079 0.52 10.9 4.0 1 23 478 500 478 500 0.95

7 17 2.3e-06 0.00015 22.0 0.8 1 23 507 530 507 530 0.97

8 17 9.9e-05 0.0066 16.9 1.2 2 23 538 559 537 559 0.96

9 17 0.013 0.89 10.2 0.3 2 21 586 605 585 606 0.94

10 17 0.0082 0.54 10.9 2.0 1 23 663 686 663 686 0.96

11 17 0.015 1 10.1 0.4 3 23 725 746 723 746 0.94

12 17 0.0004 0.026 15.0 1.0 2 23 786 808 785 808 0.95

13 17 0.00094 0.062 13.8 0.3 1 23 822 844 822 844 0.95

14 17 0.00015 0.0097 16.4 1.6 1 23 850 872 850 872 0.99

15 17 3.9e-07 2.6e-05 24.5 2.6 1 23 878 900 878 900 0.98

16 17 1.3e-05 0.00084 19.7 3.8 1 23 906 928 906 928 0.97

17 17 0.0024 0.16 12.6 0.2 1 23 934 958 934 958 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	8.6e-07	5.7e-05	23.4	1.0	1	23	223	246	223	246	0.95
2	17	0.00082	0.054	14.0	2.9	1	23	253	275	253	275	0.98
3	17	0.55	36	5.1	0.5	2	23	307	328	306	328	0.94
4	17	0.0035	0.23	12.1	3.5	1	23	418	441	418	441	0.97
5	17	0.084	5.6	7.7	0.5	1	19	448	466	448	468	0.94
6	17	0.0079	0.52	10.9	4.0	1	23	478	500	478	500	0.95
7	17	2.3e-06	0.00015	22.0	0.8	1	23	507	530	507	530	0.97
8	17	9.9e-05	0.0066	16.9	1.2	2	23	538	559	537	559	0.96
9	17	0.013	0.89	10.2	0.3	2	21	586	605	585	606	0.94
10	17	0.0082	0.54	10.9	2.0	1	23	663	686	663	686	0.96
11	17	0.015	1	10.1	0.4	3	23	725	746	723	746	0.94
12	17	0.0004	0.026	15.0	1.0	2	23	786	808	785	808	0.95
13	17	0.00094	0.062	13.8	0.3	1	23	822	844	822	844	0.95
14	17	0.00015	0.0097	16.4	1.6	1	23	850	872	850	872	0.99
15	17	3.9e-07	2.6e-05	24.5	2.6	1	23	878	900	878	900	0.98
16	17	1.3e-05	0.00084	19.7	3.8	1	23	906	928	906	928	0.97
17	17	0.0024	0.16	12.6	0.2	1	23	934	958	934	958	0.90

Sequence Information

Coding Sequence: atgaAGCTGCCCGTCATGTGTCGTACTTGCGATGCAAGGGACACAGATAAACTATACAAATTGGCTACATCCACCAAAAGATTTCCGGATAAACAGCTCTCCGACATTTTAGCTGAATTGACGAACATCAATTTGGATGAACCGCTGGCGCAACAGCTTCCGCAATGCCTGTGCGGCACTTGTGCCAGAAAGCTAATAGGCGCCTATTATTATGTGAAACAGGCCTTGGCCGCCAATGAGCTGCTCATGAATCATGTGGACCGCCTTGAGAGCGGCATAGCTGCGGTCAATGACTGCCTGCAGGAGGCGCCCATGGAGCTGTGTGCCGAGCAGCATGTAGAGATTAAAATGGAGACAGAGGAGGACGAGGCTGAAAATGATATAACCTGCACGGAATTGCCGGAGTTTACAACTGTACAACACGCCCACGAAGTGGAAGTGGATGCTGACGATGAGCTGGATAATAAAAAGTCTGGCGATCCGCTCACCATGCTCGAGCCAGTGAAACAGGAGGATGAGCCATCCGCTGCCAGAGCATCGAATGTGCAGAAATACGAATATAAGGCTGATATTGAAGACGAGGAGTCACTCGATGACTTGCCTCTGCAACAGCGCGTGCGCAAGTGGAAGCAAATGGACAAGCTGTGCACCATGAAGCgtttaattttcaaatgcaCGGATTGCCCAAAGAGCTTTAAGCGACCCGAGTATCTCAAGCAGCATGCCACACGGGCGCATAAATCAAAGACCGATTGGTTCTCCTGCTCCTATTGCATACGCAAGTTCAGTCACAGAGAAGCGCTGCAATCGCATCTAAAAGTGCATCGCGATTCCAAGCGTTCAGCCAACTTGGGCGAGAGCAAAAAGGCCAAGGATATTGATGTGAACATGTGCAAGCCGCATGGCTACAAGCTAATCGAGTGCATGATCTGTCAGAGTCAATACGACAAGATAGCGGACTTGCGTCGACATCTGGAGCACCATCCGGACATTGTTAATTTTGGCGCACGCTCAAATTTGCAGCCGCACGAACTGGCCGAGCTGTTCTATCCGGATGCCAAGCACATCAGCGAGGAACAGCTAAAGGGGCTCATACAAAAAGATCTGGCCGCGGGCATTTACCAACGTTTCTACTCAATAACCAACCAATCGGGCTATGAAATGGATCTGGACAGCTCGGAGACGGAAAGCGAGGCTGAACTGGACGGGGATGAGCAGGGCAAACAGCAACGCAGCAtacccaaagccaaatataGCTGTGAACTTTGCCACGAGCGTTTTCAACGCAAATACCAGATCTTCGATCATCAGCGTCTGATGCACGCCTGGCTGGACGCACCGCATGTCTGCGGACGCTGCGATGCGCGCTTTGTTAGcctccagctgctgcgacATCACAACGAGCTGCAGTGCAAGAACGCACAAAAACGTTTCCTGTGCCACAGATGTCCGCTACGCTTCCGCTGGCGGCACAATCTAAAGGCGCACATACGCGAGCACCGTATTACTAATCAAACGTACGAATGCAATGATTGCAAGCGCGTCTTCGACAAGAAGAAATCCCTGACGGTGCACATGCTCAGCGTGCATGCGGAGGAATCCAAGCTCATACCGTGCCAATGGTGTACACGCAAGTTCTATCGTCGCGACTATCTGGTGAAGCATCTGAAGCGTCATGGCATACGGGAACAGGATATACCGCTGGCTGAGACCCTCATTGCGGCGACCTCGAAGCCGAACGGCGCCAAGCGCATCACCTGCAAGGTTTGTAACCTTCAGTTCGAGCGCATTTGTGATCTGCGTGCGCACATTCAGCTGGAGCTGAAACTGGCCCTGTCGCTGCACCAGAACTATGACTCGCCGCACAACTACTCCATCACAAACGAATCCGGCTACGAGCTTCAGCTGGCTGACTCCGAAACGGAGGACGAAATGCAAACGCAAATACAGCCGCGCGCCTCGCCCCACCCCCACACACGACTTGTCTACATCTGCGAGCTGTGCAAGGTGCAATGCAAGCGCAAGTACGAGATGATCCAGCATCAGCGGGCCATGCATCGCTTTGACAAGATGCCGCACGAGTGCGAGCTATGCATATTCAAATGCGTATGCAAGAGCATCATGGATCAGCACAAGCAATCGCAGTGTCAGAGCAGCGATAAGAAGCTGGcgtgcagcaaatgcagctacAAATTCATGTGGCCAGAGAATCTGCAGCAGCACATGCAACTGCAGCATGGTGGCACGGAGTCGACCTCCGCTGCCGCGagtgaagcagcagcagcaactaacgCAGATCGGGTGCCAGCTTTGCCAGCTGATACCGCAGCGCCAGCAGATGacgtgcagctgctgcagtgtCCACACTGTGATCGCACGTATCAAATGAAAGCGCGCCTGAACAATCATATACGGGATGTGCACATCAATGGGGATCGCAAGCGCAAGGAGGCCATCAAGAAGTTTCTCTGCTCGCTGTGCGGGCGCGAGACCCAATCGGCGGCCACATTGGTCACCCATATGCGACGTCATACGGGCGAGAAGCCCTTCAAATGCGATCTATGTGAAATGGCATTTCCGCGCCATTCGGAGATGATGTCACACCGCAGGATGCACACGGGCGAGAAGCCATTCCATTGCACGGTGTGCGGCAAGGACTTTGCGCGATCCGACAAGCTGAAGCGGCACATGCTGACGCACAGCGGCCTGAAGCCGCACAAGTGCACCTACTGCGACAAGAGCTATCGCCAGGCTAAGGATCTGAAGCTccatctgcagcagcacacGGGCGAGTGCCCCTTTATATGTGGCACCTGTGGCGAACGTTTCATACAGGGCACCGCCCTGGAGAAGCACCGCATGATGCGCCGCCACTTTGACGAGGTCGAGGAGCGCAGCACTAATACATCAATTGcttaa
Protein Sequence: MKLPVMCRTCDARDTDKLYKLATSTKRFPDKQLSDILAELTNINLDEPLAQQLPQCLCGTCARKLIGAYYYVKQALAANELLMNHVDRLESGIAAVNDCLQEAPMELCAEQHVEIKMETEEDEAENDITCTELPEFTTVQHAHEVEVDADDELDNKKSGDPLTMLEPVKQEDEPSAARASNVQKYEYKADIEDEESLDDLPLQQRVRKWKQMDKLCTMKRLIFKCTDCPKSFKRPEYLKQHATRAHKSKTDWFSCSYCIRKFSHREALQSHLKVHRDSKRSANLGESKKAKDIDVNMCKPHGYKLIECMICQSQYDKIADLRRHLEHHPDIVNFGARSNLQPHELAELFYPDAKHISEEQLKGLIQKDLAAGIYQRFYSITNQSGYEMDLDSSETESEAELDGDEQGKQQRSIPKAKYSCELCHERFQRKYQIFDHQRLMHAWLDAPHVCGRCDARFVSLQLLRHHNELQCKNAQKRFLCHRCPLRFRWRHNLKAHIREHRITNQTYECNDCKRVFDKKKSLTVHMLSVHAEESKLIPCQWCTRKFYRRDYLVKHLKRHGIREQDIPLAETLIAATSKPNGAKRITCKVCNLQFERICDLRAHIQLELKLALSLHQNYDSPHNYSITNESGYELQLADSETEDEMQTQIQPRASPHPHTRLVYICELCKVQCKRKYEMIQHQRAMHRFDKMPHECELCIFKCVCKSIMDQHKQSQCQSSDKKLACSKCSYKFMWPENLQQHMQLQHGGTESTSAAASEAAAATNADRVPALPADTAAPADDVQLLQCPHCDRTYQMKARLNNHIRDVHINGDRKRKEAIKKFLCSLCGRETQSAATLVTHMRRHTGEKPFKCDLCEMAFPRHSEMMSHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCDKSYRQAKDLKLHLQQHTGECPFICGTCGERFIQGTALEKHRMMRRHFDEVEERSTNTSIA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00519319;
90% Identity: iTF_00506252; iTF_00490913; iTF_00551016; iTF_00563308; iTF_00475350; iTF_00534714; iTF_00617039; iTF_00531088;
80% Identity: -