Dgri004159.1
Basic Information
- Insect
- Drosophila grimshawi
- Gene Symbol
- -
- Assembly
- GCA_018153295.1
- Location
- JAECXY010000311.1:21966771-21967875[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-12 6.3e-09 35.8 0.0 13 89 138 205 130 205 0.82 2 2 2.3 4.8e+03 -2.2 0.1 54 84 243 266 235 272 0.48
Sequence Information
- Coding Sequence
- ATGCACAATCCTCGAGAGCACCTGCGGTGCCGTAGACGGGGATGCACCTACACCACAAACAGAGCATATAATCTGGAGCGCCATGAGCGCAACCATGACAAGGGCAAGGTGCCGGTGTCGCAGTACCAGCCGTGTCCACATTGCACTTATGCGGCCGGATCGCTGCACAATTTAATGCGGCACATAAGCAAAAAGCACGCAGCGCTGAGTGGAAAAACGACAACAAAGCAACAGGCGATAACAAGCCAACAACAAGCCGAGCAAACAAAAGTGCCACCTTCGACGGAGGCGAAGTCGGAGTCACTGCCTAACTGTGCGGAACGAATTCCGGAGCATCTGACAGAATCACTGATACCAGCTGCAGATTCATCGCTTTGGTTTTGGAGCACACCGCAGCAGCTGGAGAGGAATTTTCTGAGGCGTAGTGCTCTCAAGGAAGAATGTAAAATACAGGAGCGTTCTATCAAGTTGTTCAAATTTTATGCCTTGGTAAGAGCGAGAGGAGGTGCCTTGAATGTGGACCAATGGGAGGATGTTGCTGCAGCCCTGGGCTTGCCGTCGGGATCAGGTTGCCAGACCCGCGTCAAGTACATGGAGTTGTTGTACGAATTCGAAAAGAAAGAGGAAGAACGTTCGCAGGAGTGGAAGAATGTGGAAGGGTTGCCTTCCTGGTGGGATGATGGCGATTTTGTCACAGATAACATGCATTTAACATCCAGCGATGAGCAGTGGAAACAAATGAATTCGCCATCAATAACTGCTCGCAATGCAATTGTGAAATTGATTTACGACAAGTATTATGCGAAGCATTTAAATAGTAGCAAAGCGTTTCAACGGTTTCACATGAAGGATTCCTGGCTGAGGGCAACAATGTTAAATTATCAAGCGCTAAAGCGTGAACTGCATTCAAAGCATTGTTTGGGTTCTTGA
- Protein Sequence
- MHNPREHLRCRRRGCTYTTNRAYNLERHERNHDKGKVPVSQYQPCPHCTYAAGSLHNLMRHISKKHAALSGKTTTKQQAITSQQQAEQTKVPPSTEAKSESLPNCAERIPEHLTESLIPAADSSLWFWSTPQQLERNFLRRSALKEECKIQERSIKLFKFYALVRARGGALNVDQWEDVAAALGLPSGSGCQTRVKYMELLYEFEKKEEERSQEWKNVEGLPSWWDDGDFVTDNMHLTSSDEQWKQMNSPSITARNAIVKLIYDKYYAKHLNSSKAFQRFHMKDSWLRATMLNYQALKRELHSKHCLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00482016;
- 90% Identity
- iTF_00552820; iTF_00582745; iTF_00576130; iTF_00542224; iTF_00556999; iTF_00497936; iTF_00595735; iTF_00499373; iTF_00576849; iTF_00518228; iTF_00513244; iTF_00516778; iTF_00598667; iTF_00615984; iTF_00501589; iTF_00564438; iTF_00485645; iTF_00570183;
- 80% Identity
- -