Basic Information

Gene Symbol
-
Assembly
GCA_035043795.1
Location
JAWNMT010000646.1:1816147-1817133[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.2e-12 6.2e-09 36.0 0.0 11 89 136 205 130 205 0.83
2 2 1.7 2.6e+03 -1.2 0.1 52 84 241 266 233 272 0.52

Sequence Information

Coding Sequence
ATGCACAATCCTCGAGAGCACCTGCGGTGCCGTAGACGAGGATGCACCTACACCACAAACAGAGCATATAATCTGGAGCGCCATGAGCGCAACCATGACAAGGGCAAGGTGCCGGTGTCGCAGTACCAGCCGTGTCCGCATTGCACTTATGCGGCCGGATCGCTGCACAATTTAATGCGGCACATAAGCAAAAAGCATGCAGCGCTGAGTggaaaaacgacaacaaagcAACAGGCGAtaacaagccaacaacaagccGAGCAACCAAAAGTGCCACCTTCGACGGATGCGAAGTCGGAGTCAGTGCCTAACTATGCGGAACGAGTTCCGGAGCATCTGACAGAATCACTGATACCAGCTGCAGATTCATCGCTTTGGTTTTGGAGCATACCGCAGCAGCTGGAGAGGAATTTTCTGAGGCGTAGTAGTCTCAAGGAAGAATGTAAAATACAGGAGCGTTCTATCAAGTTGTTCAAATTTTATGCCTTGGTAAGAGCGAGAGGAGGTGCCTTGAATGTGGACCAATGggatgatgttgctgcagcCCTGGGCTTGCCGTCGGGATCAGGTTGCCAGACCCGCGTCAAGTACATGGAGTTGTTGTACGAATTCGAAAAGAAAGAGGAAGAACGTTCACAGGAGTGGAAGAATGTGGAAGGGTTGCCTTCCTGGTGGGATGATGGCGATTTTGTCACAGATAACGTGCATTTAACATCCAGCGATGAGCAGTGGAAACAAATTAATTCGCCATCAATAACTGTTCGCAATGCAATTGTGAAAATGATTTACGACAAGTATTATGCGAAGCATTTAAATAGTAGCAAAGCGTTTCAACGGTTTCACATGAAGGATTCCTGGCTGAGGGCAACAATGTTAAATTATCAAGCGCTAAAGTGTGAACTGCATTCAAAGCATTGTTTGGGTTCTTGA
Protein Sequence
MHNPREHLRCRRRGCTYTTNRAYNLERHERNHDKGKVPVSQYQPCPHCTYAAGSLHNLMRHISKKHAALSGKTTTKQQAITSQQQAEQPKVPPSTDAKSESVPNYAERVPEHLTESLIPAADSSLWFWSIPQQLERNFLRRSSLKEECKIQERSIKLFKFYALVRARGGALNVDQWDDVAAALGLPSGSGCQTRVKYMELLYEFEKKEEERSQEWKNVEGLPSWWDDGDFVTDNVHLTSSDEQWKQINSPSITVRNAIVKMIYDKYYAKHLNSSKAFQRFHMKDSWLRATMLNYQALKCELHSKHCLGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00482016;
90% Identity
iTF_00513965;
80% Identity
-