Basic Information

Gene Symbol
-
Assembly
GCA_018904355.1
Location
JAEIFY010000032.1:1406171-1407157[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-11 2.8e-08 33.8 0.0 15 89 140 205 131 205 0.82
2 2 2 4.3e+03 -2.0 0.1 74 84 256 266 235 272 0.49

Sequence Information

Coding Sequence
ATGCACAATTCTCGAGAGCACCTGCGGTGCCGTAGACGAGGATGCACCTACACCACAAACAGAGCATATAATCTGGAGCGCCATGAGCGCAACCATGACAAGGGCAAGGTGCCGGTGTCGCAGTACCAGTCGTGTCCACATTGCACTTATGCGGCCGGATCGCTGCACAATTTAATGCGGCACATAAGCAAAAAGCACGCAGCGCTGAGTGGAAAAACGACAACAAAGCAACAGGCGATAACAAGCCAACCACAAGCCGATCAACCAAAAGTGCCACCTTCGACGGAGACGAAGTCGGAGTCAGTGCCTAACTGTGCGGAACGAATTCCGGAGCATCTGACAGAATCACTGATACCAGCTGCAGATTCATCGCTTTGGCTTTGGAGCACACCGCAGCAGCTGGAGAGCAATTTTCTGAGGCGTAGTGCTCTCAAGGAAGAATGTAAAATACAGGAGCGTTCCATCAAGTTGTTCAAATTTTTTGCCTTGGTAAGAGCGAGAGGAGGTGCCTTGAATGTGGACCAATGGGATGATGTTGCTGCAGCCCTGGGCTTGCCGTCGGGATCAGGTTGCCAGACCCGCGTCAAGTACATGGAGTTGTTGTACGAATTCGAAAAGAAAGAGGAAGAACGTTCACAGGAGTGGAAGAATGTGGAAGGGTTGCCTTCCTGGTGGGATGATGGCGATTTTATCACAGATAACGTGCATTTAACATCCAGCGATGAGCAGTGGAAACAAATGAATTCGCCATCAATAACTGTTCGCAATGCAATTGTGAAAATGATTTACGACAAGTATTATGCGAAGCATTTAAATAGTAGCAAAGCGTTTCAACGGTTTCACATGAAGGATTCCTGGCTGAGGGCAACAAAGTTAAATTATCAAGCGCTAAAGTGTGAACTGCATTCTAAGCATTGTTTGGGTTCTTGA
Protein Sequence
MHNSREHLRCRRRGCTYTTNRAYNLERHERNHDKGKVPVSQYQSCPHCTYAAGSLHNLMRHISKKHAALSGKTTTKQQAITSQPQADQPKVPPSTETKSESVPNCAERIPEHLTESLIPAADSSLWLWSTPQQLESNFLRRSALKEECKIQERSIKLFKFFALVRARGGALNVDQWDDVAAALGLPSGSGCQTRVKYMELLYEFEKKEEERSQEWKNVEGLPSWWDDGDFITDNVHLTSSDEQWKQMNSPSITVRNAIVKMIYDKYYAKHLNSSKAFQRFHMKDSWLRATKLNYQALKCELHSKHCLGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00482016;
90% Identity
iTF_00513965;
80% Identity
-