Doch014400.1
Basic Information
- Insect
- Drosophila ochracea
- Gene Symbol
- -
- Assembly
- GCA_035044125.1
- Location
- JAWNML010000062.1:8962142-8963128[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.9 6.5e+03 -2.5 0.0 33 51 55 73 29 98 0.62 2 3 6.3e-12 1e-08 35.3 0.0 13 89 138 205 130 205 0.82 3 3 2.1 3.5e+03 -1.6 0.1 54 84 243 266 233 272 0.51
Sequence Information
- Coding Sequence
- ATGCACAATCTTCGAGAGCACCTGCGGTGCCGCAGACGAGGATGCACCTATACCACAAACAGAGCATATAATCTGGAGCGCCATGAGCGCAACCATGACAAGGGCAAGGTGCCGGTGTCGCAGTACCAGGCGTGTCCACATTGCCCTTATGCGGCCGGATCGCTGCACAATTTAATGCGGCACATAAGCAAAAAACACGCAGCGCTGAATgtaaaaacgacaacaaagcAACAGGCGATAACAAGCCAACCACAAGCCGATCAACCAAAAGTGCCACCTTCGACGGAGGCGAAGTCGGAGTCAGTGCCTAACTGTGCGGAACGAATTCCGGAGCATCTGACAGAATCACTGATACCAGCTGCAGATTCATCGCTTTGGTTTTGGAGCACACCGCAGCAGCTGGAGAGAAATTTTCTGAGGCGTAGTGCTCTCAAGGAAGAATGTAAAATTCAGGAGCGTTCCATCAAGTTGTTCAAATTTTATGCCTTGGTAAGAGCGAGAGGAGGTGCCTTGAATGTGGACCAATGggatgatgttgctgcagcCCTGGGCTTGCCGTCGGGATCAGGTTGCCAGACCCGTGTCAAGTACATGGAGTTGTTGTACGAATTCGAAAAGAAAGAGGAAGAACGTTCACAAGAGTGGAAGAATGTGGAAGGGTTGCCTTCCTGGTGGGATGATGGCGATTTTGTCACAGATAACGTGCATTTAACATCCAGCGATGAGCAGTGGAAACAAATGAATTCGCCATCAATAACTGTTCGCAATTCAATTgtgaaaatgatttatgacAAGTATTATGCGAAGCATTTAAATAGTAGCAAAGCGTTTCAACGGTTTCACATGAAGGATTCCTGGATGAGGGCAACAAAGTTAAATTATCAAGCGCTAAAGTGTGAACTGCATTCTAAGCATTGTTTGGGTTCTTGA
- Protein Sequence
- MHNLREHLRCRRRGCTYTTNRAYNLERHERNHDKGKVPVSQYQACPHCPYAAGSLHNLMRHISKKHAALNVKTTTKQQAITSQPQADQPKVPPSTEAKSESVPNCAERIPEHLTESLIPAADSSLWFWSTPQQLERNFLRRSALKEECKIQERSIKLFKFYALVRARGGALNVDQWDDVAAALGLPSGSGCQTRVKYMELLYEFEKKEEERSQEWKNVEGLPSWWDDGDFVTDNVHLTSSDEQWKQMNSPSITVRNSIVKMIYDKYYAKHLNSSKAFQRFHMKDSWMRATKLNYQALKCELHSKHCLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00482016;
- 90% Identity
- iTF_00513965;
- 80% Identity
- -