Basic Information

Insect: Drosophila ercepeae
Gene Symbol: -
Assembly: GCA_018150545.1
Location: JAECWL010000161.1:14611833-14615258[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.084 5.9 7.4 3.1 3 23 310 331 308 331 0.96

2 18 0.24 16 6.0 0.4 1 23 338 363 338 363 0.91

3 18 0.037 2.6 8.5 2.1 2 23 374 395 374 395 0.93

4 18 0.0095 0.66 10.3 0.5 3 23 436 457 435 457 0.95

5 18 0.0021 0.15 12.4 0.5 3 23 465 485 463 485 0.95

6 18 0.09 6.3 7.3 0.1 1 23 493 516 493 516 0.96

7 18 0.00026 0.018 15.3 0.3 2 23 521 542 520 542 0.97

8 18 2 1.4e+02 3.0 0.1 1 20 550 569 550 571 0.83

9 18 0.00067 0.047 14.0 1.0 1 23 590 614 590 614 0.91

10 18 0.046 3.2 8.2 1.8 3 21 621 639 621 640 0.90

11 18 0.0022 0.15 12.4 0.5 1 23 659 684 659 684 0.96

12 18 0.2 14 6.2 1.7 2 23 702 724 701 724 0.94

13 18 0.0019 0.13 12.5 0.3 2 23 730 752 729 752 0.93

14 18 0.0077 0.54 10.6 0.2 2 23 756 778 755 778 0.96

15 18 4e-05 0.0028 17.8 2.0 1 23 784 806 784 806 0.97

16 18 0.004 0.28 11.5 1.0 1 23 810 833 810 833 0.94

17 18 5.6e-06 0.00039 20.5 1.4 1 23 839 862 839 862 0.97

18 18 9.3e-05 0.0065 16.7 0.2 4 23 869 894 866 894 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.084	5.9	7.4	3.1	3	23	310	331	308	331	0.96
2	18	0.24	16	6.0	0.4	1	23	338	363	338	363	0.91
3	18	0.037	2.6	8.5	2.1	2	23	374	395	374	395	0.93
4	18	0.0095	0.66	10.3	0.5	3	23	436	457	435	457	0.95
5	18	0.0021	0.15	12.4	0.5	3	23	465	485	463	485	0.95
6	18	0.09	6.3	7.3	0.1	1	23	493	516	493	516	0.96
7	18	0.00026	0.018	15.3	0.3	2	23	521	542	520	542	0.97
8	18	2	1.4e+02	3.0	0.1	1	20	550	569	550	571	0.83
9	18	0.00067	0.047	14.0	1.0	1	23	590	614	590	614	0.91
10	18	0.046	3.2	8.2	1.8	3	21	621	639	621	640	0.90
11	18	0.0022	0.15	12.4	0.5	1	23	659	684	659	684	0.96
12	18	0.2	14	6.2	1.7	2	23	702	724	701	724	0.94
13	18	0.0019	0.13	12.5	0.3	2	23	730	752	729	752	0.93
14	18	0.0077	0.54	10.6	0.2	2	23	756	778	755	778	0.96
15	18	4e-05	0.0028	17.8	2.0	1	23	784	806	784	806	0.97
16	18	0.004	0.28	11.5	1.0	1	23	810	833	810	833	0.94
17	18	5.6e-06	0.00039	20.5	1.4	1	23	839	862	839	862	0.97
18	18	9.3e-05	0.0065	16.7	0.2	4	23	869	894	866	894	0.83

Sequence Information

Coding Sequence: ATGTCGGAAAACCAGGAAAAACAAAGCTGCCTGCATTGTAGAGTATTCAATCCGAAATTCCAGTACCAGGAGATATTTGATGAGTTTGGCACCGAGTTGGGCCTGCAATCCTTGTTGGCAAAGCATTTTGACTTCGCGGTGACACCGGATTCTAATAAATCTCAGCTGCTTTGCGAGATTTGCGTCAACAGTTTGATCCGCCTCTTTGACATCGATGAGCTGCAGCGGGAACAGGATGCGGCGAAGGATAACGTCAAGGCGACTGCTCCGGCACCTGAAGTTGTTATCCCAGAATGCAGTGCTTCGTCCAAACCCTCCTTGGAGCCTCCTCCGAAACAGGCTGCACCACAAAATACCAAACCCGTAAAAACTGGAACCTGTACTATCGTTAGGAAGGAATCACCACCACCTCAGATATCTCCTACTACTTCGAAGGAATTTGATAAACTCAAAGAGCAGGCCATATCCGCTCCTACCGCCAAGTCACAATCTAAAAGAATCTCCAAAGAATCGGATCAGGATCAGATCAGTCGTCTTATATGCAATATCCTAAACGAGGATGAAACCATTGTTGAGGACGTAGCTGCTCCACAGCCAGAGGAACCCGAGAAGCAGGAGGAAATAGTTCTGCTGGACAGCGAGTCCATAGCCGATCCTGATATAGACCAGGAAGAATACATTTACGACCATGAAGATATCTTGGACCCGGTTTTGGAGAACTTAAAACTAAAGGCAGAGACTCGACAGAAGGTGCAAGCGGAGGATAGCCAGAGCGAAGGAGAAAACGATGAAAGTGAATCCAGCAACGTGGTGATCTTCAACTTTGTTGAGATTAAAGAACAAGACGACATTAGTAACATTTTCGACTACCTTTCTACGGTGGTTAAGACTAGCTTTGAAAAACTCTCTTTCGAGTGGAGTACAGATTGCAAGCACTGCTCTCAAAAGTTTCAAAACTTTAAGGGTCTATTAGGTCACATGCTAAAGTCCCATAAATCTCGAGGGAATGTCTACAAGTGTCCGTTCAAAGACTGCAGCAAGGAGCTAAAAGGATCCAAATTTCTAGCCATGCATCTGGTTCTCATGCATGCCAATCTAATAGACATACCAATCTATGGCAGCTGTCCGGAGTGCAAATTGACATTTTCAAACATTCTGCAGTACAACAAACACTCTTGTGCCCATGTTATTAAAAAGAAACGAGGCGTCCGTCTCTTTTGCGAAATGTGTGCCCAGTATTTCCCTTCCTGGAAGCGGTTCAACTTTCACAATCAATTTCATTTGGAGAAACACCGTCCCCGTAACTGCTTCATCTGCGATTATTCTAGCACTAATATTGACGAACTTTTCCAGCATTTGAATTATTTCCACGAACCAGAGGGCACTCTTTTCTGTGATCTTTGCGATCGCACATTCCGAGACCCTGAGGTTTTCACAGACCATAACAAATCGCATGCCAATGTTAGTAGCACCACCTTTTCCTGCGGCGAGTGCATGGCCATGTTTGAGTCGCGTGGTCGGTTGAACGGGCACATGAGAGCTATGCATGGCAGCGCTATAAGCTGCGAAATGTGCTCCCGCGAATTCGCCACCGAAGCTACCTACAACGTTCACATGAAGAAGCACTTAATCATCGAAAAGGACATCTATGTGTGCAGCAAGTGCGGGCTGTTGAGCGAAAAACAGGAGACTATGCTAGCACATGTACATAATCAGGAGTCTACCTGTTTCGAAGCAAAGATTCTCACGGAACTTCTTCGAGATGCCTACGCTTGCGAACACTGCTCGCTTTACTTCAAGGAGAAAGCTGACCTGCGTAGGCATCGGGAAACCGGAGTGCACGAGAACAGAATGTATTGGTGTCAACCGTGTGGGAAGGAATTTTCACATATGAAACTCTACCGCCATCACATTCGTAACTTTCAACAAATCAAAGGCGATTCCACACACCGCAAGCTGGATATTTGTGTTTTCTACATGTGCGATCAAGAGGGATGTTCTGAGTCATATGCGAATTGGAATTCTTTATACACGCACAAGCGACGCACCCATGAATCCGCACCCAAGCAACCTGATAAAACTACAAAATCAGAACAAGAGTGGGTGTGTCAGTTTTGTTTGAAGCAGTGCCGCTCTAAGATGTCCTTGTCAGTTCATGTAGCAAGGAGTCACAATAATGATAATGTTACCTGCCCTTTGTGTAATGCGTCTTATAAGAACCAGGAAGCTTTGGACAAGCACCATGCCTACTGGCACGAGCCCATTGAATGTCCCCAGTGCTTTAAAATTGTAAAAAACAGGCGGAACTATGATACTCATTTAAATGTAGTTCATTCGAATACAAAGCGTTATGCCTGCAGCGTTTGCCAAAAGGGTTTCTACCACAAAAGCGAAATGGAATCACATCAAAGGCTCCATGGCCAATCGTACAATTGCGACCAGTGCAGCTTTACCACCAGGAACAAGAAGTCCCTTTCCGTTCACATTCTCGGCCAGCACTACAAACGATTTGCCTTTGAATGCAAGATGTGCAACAAGCGCTTCGGACGTCGACAAGGCCTGAACACCCACATGCAACGAGCTCACGGTTCAAAGTTCATGTGCCGCGACTATTTTGAGGGCGGTTGTGGGCGCAATTTCATCAACAGCTCCCAGTTGAATGTTCACGTGCGGAAGGTGCACAATGGCACCATTTTCCTGACCGAGGAAGAGGAGGAGGAGTTCATCAGCGATGGGCCATCATCTTCCAAGAAACGCTGCTTTCGCATCGACGATGATACCAATATCGAGTTTATAGAAGATTCAGAAACCATTCCAGATGAAATAGAAATGGTGGACGAAATCGATGAGGATGATTACGAAGATTTAGACGACAGTTCCGTTTCCAAGAATTGA
Protein Sequence: MSENQEKQSCLHCRVFNPKFQYQEIFDEFGTELGLQSLLAKHFDFAVTPDSNKSQLLCEICVNSLIRLFDIDELQREQDAAKDNVKATAPAPEVVIPECSASSKPSLEPPPKQAAPQNTKPVKTGTCTIVRKESPPPQISPTTSKEFDKLKEQAISAPTAKSQSKRISKESDQDQISRLICNILNEDETIVEDVAAPQPEEPEKQEEIVLLDSESIADPDIDQEEYIYDHEDILDPVLENLKLKAETRQKVQAEDSQSEGENDESESSNVVIFNFVEIKEQDDISNIFDYLSTVVKTSFEKLSFEWSTDCKHCSQKFQNFKGLLGHMLKSHKSRGNVYKCPFKDCSKELKGSKFLAMHLVLMHANLIDIPIYGSCPECKLTFSNILQYNKHSCAHVIKKKRGVRLFCEMCAQYFPSWKRFNFHNQFHLEKHRPRNCFICDYSSTNIDELFQHLNYFHEPEGTLFCDLCDRTFRDPEVFTDHNKSHANVSSTTFSCGECMAMFESRGRLNGHMRAMHGSAISCEMCSREFATEATYNVHMKKHLIIEKDIYVCSKCGLLSEKQETMLAHVHNQESTCFEAKILTELLRDAYACEHCSLYFKEKADLRRHRETGVHENRMYWCQPCGKEFSHMKLYRHHIRNFQQIKGDSTHRKLDICVFYMCDQEGCSESYANWNSLYTHKRRTHESAPKQPDKTTKSEQEWVCQFCLKQCRSKMSLSVHVARSHNNDNVTCPLCNASYKNQEALDKHHAYWHEPIECPQCFKIVKNRRNYDTHLNVVHSNTKRYACSVCQKGFYHKSEMESHQRLHGQSYNCDQCSFTTRNKKSLSVHILGQHYKRFAFECKMCNKRFGRRQGLNTHMQRAHGSKFMCRDYFEGGCGRNFINSSQLNVHVRKVHNGTIFLTEEEEEEFISDGPSSSKKRCFRIDDDTNIEFIEDSETIPDEIEMVDEIDEDDYEDLDDSSVSKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00481678;
90% Identity: iTF_00615044; iTF_00546108;
80% Identity: -