Derc004800.1
Basic Information
- Insect
- Drosophila ercepeae
- Gene Symbol
- Lztr1
- Assembly
- GCA_018150545.1
- Location
- JAECWL010000174.1:8332906-8337293[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.6e-13 6.6e-11 42.2 0.4 1 108 551 692 551 694 0.87 2 4 0.59 1.5e+02 2.4 0.1 78 109 694 725 691 726 0.89 3 4 4.6e-19 1.2e-16 60.7 0.0 8 97 785 874 779 889 0.85 4 4 5.1 1.3e+03 -0.6 0.0 72 100 883 911 879 919 0.83
Sequence Information
- Coding Sequence
- ATGCTAAAGTCGTTTAGCGGCGGCATTGGCGTGGCATCCACGGGAGGAGGCACTGGAAGCGGAGGTGTCGGCAGCGGAGGCGGTGGGGGCGGCGGTTCTGGAGGCTCTGGTGGCACTGGAGGCGGCGGGGCAACATCAAGGAGTGGGCGTGCCAGTTGTGGGTTGAGCTCCAGTTCCATTTCCAGCGGCCTGAGCGCCGTCTGCGGTTTCGTAAGAGGCGAGGATCGAGGCACATCCAGTGGCGGGAGCACACCTGCAAGTGTCATCTACTGTCCCGCCTGTGTGGCAGCCTCCGGTCAGGGCCAGAGCTCAAGTCCCGCTCAGAATTCGAGCCCCCACCACGAGTCCTTCTTCTCGCGCAGCTCCTCCAAGTCCAGCAAGCGGCAGAAGGCCCGGAAGAGCGCCTCGACGGCTGGCTGTTTGGACGCCCAGCACATTCGTTCCAACCTGAGAATGTCCACATCGAGTTCCATGCGCAGCTCCACTACCAGGGGCGGAAGCGCCGGGGGAGCCAGTACCAGCACGGCTGGAGCCAACTTCAGCCTGGCCTACGATGCGGCCAGCAATGCCAGCAGCGGCAGTGGCAGTGGCAGCACCAAGGCAGCCTCCCCCGGCAGCTACAGTTGCAACGCCTTGAATGTGGACTTTAATTCCTACACGGCCACCCACCAGTGGACCAGGATGCTGGAGTGTGCGGAGTTTGTGGGTGCCAAGCGCAGCAAGCACACCGTGGTGGCCTACAAGGATGCCATGTTTGTGTTCGGCGGCGACAATGGCAAGAACATGCTCAATGATTTAATCCGTTTCGGGGTGAAGGACAAGTCGTGGGGCAGGGCCTGTGCCACGGGAACTCCACCGGCGCCCAGGTACCATCATTCCGCTGTGGTGGCCGGCAGCTCGATGTTCATTTTTGGCGGCTATACCGGCGACATCCACTCCAATTCGAATCTGACCAACAAGAACGACTTGTTCGAGTACAAGTTCCAGAGCGCCATGTGGGTGCAGTGGATGTTTTCGGGGCGCCAGCCGGTTCCGAGATCGGCCCACGGGGCAGCCGTCTATGACAACAAAATGTGGATCTATGCGGGCTACGATGGCAATGCGAGGTTAAACGATATGTGGACCTTGAATCTGACCGGGGAGAATCAGTGGGAGGAGGTGGAACAGCTGGGGGATAGGCCACCGACCTGTTGCAACTTTCCGGTTGCCGTGGCCCGGGATGCCATGTACGTATTTTCCGGCCAGAGCGGCCTGCAGATCACCAACTCGCTGTTTGAGTTTCATTTCAAGACGCGCACCTGGCGACGCATTTCCAACGAGCCGGTGCTGAGGGGTGCCACATCGGCGCCCCCATCCCGGCGCTACGGGCACACGATGGTGCATCACGATAGGTTCCTCTATGTCTTTGGCGGATCGGCGGATTCGACGCTGCCCAACGACCTGCACTGCTACGATCTGGACTCGCAGGTGTGGTCCGTCATCCAGCCGGAACAGAACTCGGATGTGCCCTCGGGACGGGTGTTCCACGCCTCGGCCGTCATTGGCGATGCCATGTACATCTTTGGCGGCACGGTGGACAACAGTGTGCGGCGCGGAGACACCTATCGGTTCCAGTTCTCGTCGTATCCGAAGTGCACGCTGCGCGATGACTTCGGCAAGTTCTTCCTGGAGAAGCAGTTCTGCGACATTCAGTTCGTCGTCGGCGCCGAGGAGATACACATCCTGGCGCACATTGCCTTTGTGGCAGCTCGATCGAAGTATTTACGTAACAAGATATTGGCGGCCCGCGAGGCGCGCCAGCAACAGATGGAGAAAGTGTTCGGTGTGGGCCAGGTGGATACTCAGGCCTTGAACACGGGTGCGGGCGGGGACCGCGCCCCCATGTTAGAGGTCCGCCTGGCCCACGCCTCTCCTGAGGCCTTTGATATAATCCTTAACTACATATACACGGATCGCATTGATCTGAAGGACACATACAACAAGAACATCATCATCCTCATTACGGACATTTACCAATTGGCGGGCTTGTTCACAATGCCGCGGCTGGCCCACGGCTGTATCCAGTATTTGGATTACAAAATAAACAAGCTCAATGTCCTGGAGGCGCTCTACAATGCCGACAAGAGCAACATTAAAATCATCAAGGACCATTGCATGCAGTTCATCATTAAGGACGAAAACTTCACCGACGTGGTCATGTCCAGTGAGTTTAGCGACTTGGACAAGCCGCTTCTGGTGGAGATCATCAGGAAGCGCCTGCATCCCAGCAAGCTGGTGATGGAAACCAGTTTCGAGGGAAGCACAGGCACCACCTTGGAGATCGATCTCTGCGCTTTCTTGGAGACAACGGGCAACGACTTTTGCGACATCAGCCTCATCCTGGAGGACCATGTTATTCCGGCCCACAAATCTGTGTTATCCTCACGTTGTACCTATTTCCAGGGCATGTTCCGCTCTTTCATGCCCCCGGACAATACCGTCAATATACAAATTGGCGAGATTTCACCCTCACTGGAGGCTTTCAACTCGCTGCTGCGGTATATCTACTATGGTGAGACGAAGATGCCGCCCCAGGATGCACTGTACCTGTTCCAGGCGCCGTGCTTCTATGGACTGTCCAACAATCGGCTCCATGCGTTCTGCAAGTATTCGCTGGAGCATAATATCACCGATGAGAATGTACTGCAGACTCTGGAGGCGTCGGACATCACCAAAATCTATGACATCAAGGAGTATGCACTCAAGCTGATTGTCAAAGATTTTGCCAAGGTGGCCCGTCTGCCAAAGATTGCGGGTTTGTCGCGCGAACTGTTGCTGGAGATCATATGCGCTGTGGCCGATTCGCACGGCGAGTTTCTGACACGGATTAATATCAATACCGATATCTGA
- Protein Sequence
- MLKSFSGGIGVASTGGGTGSGGVGSGGGGGGGSGGSGGTGGGGATSRSGRASCGLSSSSISSGLSAVCGFVRGEDRGTSSGGSTPASVIYCPACVAASGQGQSSSPAQNSSPHHESFFSRSSSKSSKRQKARKSASTAGCLDAQHIRSNLRMSTSSSMRSSTTRGGSAGGASTSTAGANFSLAYDAASNASSGSGSGSTKAASPGSYSCNALNVDFNSYTATHQWTRMLECAEFVGAKRSKHTVVAYKDAMFVFGGDNGKNMLNDLIRFGVKDKSWGRACATGTPPAPRYHHSAVVAGSSMFIFGGYTGDIHSNSNLTNKNDLFEYKFQSAMWVQWMFSGRQPVPRSAHGAAVYDNKMWIYAGYDGNARLNDMWTLNLTGENQWEEVEQLGDRPPTCCNFPVAVARDAMYVFSGQSGLQITNSLFEFHFKTRTWRRISNEPVLRGATSAPPSRRYGHTMVHHDRFLYVFGGSADSTLPNDLHCYDLDSQVWSVIQPEQNSDVPSGRVFHASAVIGDAMYIFGGTVDNSVRRGDTYRFQFSSYPKCTLRDDFGKFFLEKQFCDIQFVVGAEEIHILAHIAFVAARSKYLRNKILAAREARQQQMEKVFGVGQVDTQALNTGAGGDRAPMLEVRLAHASPEAFDIILNYIYTDRIDLKDTYNKNIIILITDIYQLAGLFTMPRLAHGCIQYLDYKINKLNVLEALYNADKSNIKIIKDHCMQFIIKDENFTDVVMSSEFSDLDKPLLVEIIRKRLHPSKLVMETSFEGSTGTTLEIDLCAFLETTGNDFCDISLILEDHVIPAHKSVLSSRCTYFQGMFRSFMPPDNTVNIQIGEISPSLEAFNSLLRYIYYGETKMPPQDALYLFQAPCFYGLSNNRLHAFCKYSLEHNITDENVLQTLEASDITKIYDIKEYALKLIVKDFAKVARLPKIAGLSRELLLEIICAVADSHGEFLTRININTDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00479535;
- 90% Identity
- iTF_00566145;
- 80% Identity
- -