Basic Information

Insect: Drosophila equinoxialis
Gene Symbol: -
Assembly: GCA_018150345.1
Location: JAECWI010000001.1:11015879-11019034[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.15 12 6.7 4.6 2 23 220 242 219 242 0.91

2 16 0.024 1.9 9.2 2.8 2 23 284 305 284 305 0.96

3 16 5.1 4.1e+02 1.9 0.0 3 23 346 367 345 367 0.91

4 16 0.052 4.2 8.1 0.4 1 19 373 391 373 393 0.82

5 16 0.0016 0.12 12.9 1.7 1 23 403 426 403 426 0.98

6 16 0.00018 0.014 15.9 0.2 2 23 431 452 430 452 0.97

7 16 0.012 0.99 10.1 1.4 1 22 500 521 500 524 0.91

8 16 4.9 3.9e+02 1.9 0.7 3 21 531 549 531 550 0.85

9 16 0.0088 0.7 10.6 3.7 1 23 569 594 569 594 0.96

10 16 0.0048 0.38 11.4 1.7 2 23 625 647 624 647 0.94

11 16 0.0083 0.67 10.6 0.3 3 23 654 675 652 675 0.92

12 16 0.02 1.6 9.5 0.3 2 23 679 701 678 701 0.94

13 16 6e-06 0.00048 20.5 2.3 1 23 707 729 707 729 0.98

14 16 0.026 2.1 9.1 3.5 1 23 733 756 733 756 0.94

15 16 0.0003 0.024 15.2 0.8 1 23 762 785 762 785 0.97

16 16 0.0035 0.28 11.8 0.4 5 23 798 817 789 817 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.15	12	6.7	4.6	2	23	220	242	219	242	0.91
2	16	0.024	1.9	9.2	2.8	2	23	284	305	284	305	0.96
3	16	5.1	4.1e+02	1.9	0.0	3	23	346	367	345	367	0.91
4	16	0.052	4.2	8.1	0.4	1	19	373	391	373	393	0.82
5	16	0.0016	0.12	12.9	1.7	1	23	403	426	403	426	0.98
6	16	0.00018	0.014	15.9	0.2	2	23	431	452	430	452	0.97
7	16	0.012	0.99	10.1	1.4	1	22	500	521	500	524	0.91
8	16	4.9	3.9e+02	1.9	0.7	3	21	531	549	531	550	0.85
9	16	0.0088	0.7	10.6	3.7	1	23	569	594	569	594	0.96
10	16	0.0048	0.38	11.4	1.7	2	23	625	647	624	647	0.94
11	16	0.0083	0.67	10.6	0.3	3	23	654	675	652	675	0.92
12	16	0.02	1.6	9.5	0.3	2	23	679	701	678	701	0.94
13	16	6e-06	0.00048	20.5	2.3	1	23	707	729	707	729	0.98
14	16	0.026	2.1	9.1	3.5	1	23	733	756	733	756	0.94
15	16	0.0003	0.024	15.2	0.8	1	23	762	785	762	785	0.97
16	16	0.0035	0.28	11.8	0.4	5	23	798	817	789	817	0.84

Sequence Information

Coding Sequence: ATGAACATGGACAAAAAGTTACAAAAATGTCTGCATTGTACAGTGGTCAATCCAAAATTAAAATACCATGAAATATTTAAAGGACTTGGCGCAGAAATTGGATTGGAACAGTTATTGTCAAATCATTTCCAATTTGAGGTCACCGAAGACTCGAAAAAGTCGCAGCTACTTTGCGAAGAGTGTGTCAATAGTTTAATTCGATTTTTTGACATCGATGAATTGAAACGGGAGCAAAATGCAGCCAGGTTAAAAACTCAGCCGACAGAAGCAGCTCAAGAAGTGGATGTGGAGAAATCAATCATTGATGAGTCCTGCATTTATGATCTTATTTTTAAATCGGATGATGTTGCGCCGGCTGATGAGGTGGAAGAGGTGGAGGAGGAAAACGATGTTCCCAGCAATTCAGAGGAGGTGGGAATTGAAGATGTTATTGTGGAGGATCGTGTAACTGTAATCCGATTGCCAAATGATGAGGAAGCAGAGGAAGTGGATTTAGAAACTGAACAAGAAGACGAACATGATCTTAAAGAAGACAGCAATGTGGTAATCATAAATTTCGTGGAAATTAAAGAGAAGGATGACATTGTTGATTTATATGGTTACTTGGCCACTGCGGTGAAAACGAACTTTGAAACCTTATCCTTTGACTGGAGCACCAGCTGCAAACACTGCTCTTTGTCTTGTACGAATTATCAGCAGCTACTTAACCATGTGGCCCAAAAGCACAATGGTCATTCATTTGATTGTCCAATTGAGGGTTGCTTGACGAAAGGCCTACAGGATAAACAATATCTAGCTATACACTTGGTTACCCATCATGGTCCAGTCGCTGAAATACCCATCTATGGCAGTTGTCCGGAGTGCAAATTAACTTTTTCAAACATTCTGCAATATAATAAACATTCCTGTTCCCATGTGATTAAGAAGAAAAGGGGAATGCAGCTTTATTGCGAAATGTGCTCTATTGAGTTTCCCTCTTGGAAACGTTTTAATTTCCATAATCAATTCCATTTGGAGCGTCATCGACCACGAGCGTGTTTTGTTTGCGATTATGCAGACACCAATATCGGCGAACTCTTTCAGCATTTGCAATATGCCCATGAACCAGAGAATACATTCTTTTGTAATCTGTGTGATCGCACTTTTCGCGATGAAGCTGTCTATTTGGAGCACAATAAATGTCATTCGAATGCCAATAGTAATACATACACTTGTGGTGAATGTTTCAACACTTTTGACACCCGAAGTCGTTTCAATGGACACATGCGCTCGATGCATGGCACCTTTATTAGTTGCGAGATTTGTTCCCGTGAATTTGCCAGCGAAGCCACCTACAATGTCCATATGAAGAAGCATTTGATAATTGAACGAGATGTTCATATATGCAGAAATTGTGGTCAATTGAGTGAACATGAGAGTCGTATGCTTCAGCATATAGAAAATGAATCAACAAATTGTCACAATGCTGAAATCTACACTGAACTCTTACGAAATGCTTATATATGCGAAATGTGTTCATCTTATTTTCGTGAAAAATCGGATTTACATAAGCATCGTCAATTGGGTGTCCATAATAATGGTATATATTGGTGTCAGCCATGTGACAAAGAATTCACCGATATGAAAATCTATCGGCATCATTTAAGAAATTTTCAACAATTGAAAACGGATACAGAACACAGAAAATTGGAAATATGCTTATACTATATGTGTGATCAGAAGGATTGCTTTGAATCATATACGCATTGGAATTCCTTGTACACCCATAAGAGACGGACTCATAAAAACAATATGACGGCAGCTAAATTGAAAGATGACCAACAATCACCATCCACATCGAAATCGATTGGCAGTGAAAAGAAAAAGCAATGGCAATGTCAGTTTTGTGATAAGGAATGTCGTTCCAAAATGTCACTATCCGTGCATGTAGCACGCAGTCATAATAATGATAATGTGATTTGTTCTTTATGCAATGCATCGTATAAGAATCAGGAGGCTTTGGATAAACATCATGCCTATTGGCATGAACCTATCGAGTGTCCCAAATGCTTTAAGATTGTAAAGAATCGCCGCAATTATGATACCCATGAGAATGTTGTTCATTCCAATAACAAACGTTATACCTGTGAGATTTGTAACAAGGGTTTCTATCACAACAGCGAAATGAAAGCACATCAGAAGCTTCATACTCAGCTGTTTAGCTGTAAGCACTGTAGCTTTACCACACGAAAGAAAACTTCTTTATCCGTTCACGTTATGGGTCAGCATTTGAAGCGTTTTGCTTTTGAGTGCAAATTGTGCATGAAACGGTTTGGTCGTCGTCAGGGATTGACCGCGCACATGCAACGTGTGCATAGCACTAAACATATTTGTCAGGAATATATTACTGATGGCTGCAATCGTAGTTTTCCCTCAACATCGGCATTGAGTCAACATGTCAAGAGAGTTCACAAGGGTACTATATTTCTGCACGATGAAGACGATGAGGAGGAGGAAATGGAGCTAGAGCTGGAGGACGAGGTTGGTCCATCATCATCTAAGAAACGTTGTTTTCAAATAAATGATACCGAAATCGAGTTTATCGACGAAAGTGCATATGATAGTCAGGAATGTATGGATACAGAAGAAATACAGAATGACAATTAG
Protein Sequence: MNMDKKLQKCLHCTVVNPKLKYHEIFKGLGAEIGLEQLLSNHFQFEVTEDSKKSQLLCEECVNSLIRFFDIDELKREQNAARLKTQPTEAAQEVDVEKSIIDESCIYDLIFKSDDVAPADEVEEVEEENDVPSNSEEVGIEDVIVEDRVTVIRLPNDEEAEEVDLETEQEDEHDLKEDSNVVIINFVEIKEKDDIVDLYGYLATAVKTNFETLSFDWSTSCKHCSLSCTNYQQLLNHVAQKHNGHSFDCPIEGCLTKGLQDKQYLAIHLVTHHGPVAEIPIYGSCPECKLTFSNILQYNKHSCSHVIKKKRGMQLYCEMCSIEFPSWKRFNFHNQFHLERHRPRACFVCDYADTNIGELFQHLQYAHEPENTFFCNLCDRTFRDEAVYLEHNKCHSNANSNTYTCGECFNTFDTRSRFNGHMRSMHGTFISCEICSREFASEATYNVHMKKHLIIERDVHICRNCGQLSEHESRMLQHIENESTNCHNAEIYTELLRNAYICEMCSSYFREKSDLHKHRQLGVHNNGIYWCQPCDKEFTDMKIYRHHLRNFQQLKTDTEHRKLEICLYYMCDQKDCFESYTHWNSLYTHKRRTHKNNMTAAKLKDDQQSPSTSKSIGSEKKKQWQCQFCDKECRSKMSLSVHVARSHNNDNVICSLCNASYKNQEALDKHHAYWHEPIECPKCFKIVKNRRNYDTHENVVHSNNKRYTCEICNKGFYHNSEMKAHQKLHTQLFSCKHCSFTTRKKTSLSVHVMGQHLKRFAFECKLCMKRFGRRQGLTAHMQRVHSTKHICQEYITDGCNRSFPSTSALSQHVKRVHKGTIFLHDEDDEEEEMELELEDEVGPSSSKKRCFQINDTEIEFIDESAYDSQECMDTEEIQNDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00571459; iTF_00612326; iTF_00618650; iTF_00523933;
90% Identity: iTF_00571459; iTF_00612326; iTF_00618650; iTF_00523933;
80% Identity: -