Dwil011996.1
Basic Information
- Insect
- Drosophila willistoni
- Gene Symbol
- -
- Assembly
- GCA_018902025.1
- Location
- JAFEWB010000523.1:1377244-1380433[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.064 5.2 7.9 1.8 2 23 223 245 222 245 0.92 2 16 0.025 2 9.2 2.8 2 23 287 308 287 308 0.96 3 16 8.1 6.6e+02 1.2 0.1 3 23 349 370 348 370 0.88 4 16 0.053 4.3 8.1 0.4 1 19 376 394 376 396 0.82 5 16 0.0016 0.13 12.9 1.7 1 23 406 429 406 429 0.98 6 16 0.00018 0.015 15.9 0.2 2 23 434 455 433 455 0.97 7 16 0.011 0.92 10.2 3.9 1 22 503 524 503 527 0.91 8 16 5 4.1e+02 1.9 0.7 3 21 534 552 534 553 0.85 9 16 0.006 0.49 11.1 3.1 1 23 572 597 572 597 0.97 10 16 0.0048 0.4 11.4 1.7 2 23 629 651 628 651 0.94 11 16 0.0028 0.23 12.1 0.3 3 23 658 679 656 679 0.92 12 16 0.02 1.6 9.4 0.3 2 23 683 705 682 705 0.94 13 16 6.1e-06 0.00049 20.5 2.3 1 23 711 733 711 733 0.98 14 16 0.0063 0.52 11.0 3.3 1 23 737 760 737 760 0.94 15 16 0.0003 0.025 15.2 0.8 1 23 766 789 766 789 0.97 16 16 0.083 6.8 7.5 0.4 5 23 802 821 793 821 0.84
Sequence Information
- Coding Sequence
- ATGAACATGGACAAAAAGTTACAAAAATGTCTGCATTGTACAGTGGTCAATCCAAAATTAAAATACCATGAAATATTCAAAGGACTTGGCGCAGAAATTGGATTGCAACAATTATTGTCAAATCATTTCCAATTTGATGTTACCGAAGACTCGAAAAAGTTGCAGCGACTTTGCGAAGAGTGTGTCAATAGTTTAATTCGATTTTTTGACATCGATGAATTGAAACGGGAGCAAAATGCAGCCAGGGCAAAAACTCAGCCGACAGAAGCAGCTAACGAAGTGGATGTGGAAAAATCAATCATTGATGAGTCCTGCATTTATGATCTTATTTTTAAATCGGATGATATTGCGCCGGCGGATGAGGAGGAGGTGCAGGAGGAAAACGATGTTCCCAGCAAGTCAGAGGAGGTGAGAATTGAAGATGTTATTGTGGAGGATCGTGTAACTGTAATCCGATTGCCGAATGATGAAGAAGCAGAGGAAGTGGACTTAGAAACTGAACATGAAGATGAACAGCAAGTCGAACATGATCTTAAAGAAGACAACAATGTGGTAATCATAAATTTTGTGGAAATTAAAGAGAAGGATGATATTGTTGATTTATATGGTTACTTGGCCACGGCGGTGAAAACGAACTTTGAAACCTTATCCTTTGACTGGAGCACCAGCTGCAAACACTGCTCTTTGCCTTTAACGAATTATCAGCAGCTACTTAACCATATGGTCCAAAAGCACAATGGTCATTTCTTTGATTGTCCCATTGAGGGTTGCTTGACGAAAGGACTACAGGATAAACAATATCTAGCTATGCACTTGGTTACCCATCATGGACCAGTGGCTGAAATACCCATCTATGGCAGTTGTCCGGAGTGCAAATTAACTTTCTCAAATATTTTGCAATATAATAAACATTCCTGTTCCCATGTGATTAAGAAGAAAAGGGGAATGCAGCTCTATTGCGAAATGTGCTCTATTGAGTTTCCCTCTTGGAAGCGTTTTAATTTCCATAATCAATTCCATTTGGAGCGTCATAGACCACGAGTCTGTTTTGTTTGCGACTATGCAGACAACAATATCGCCGAACTCTTCCAGCATTTGCAATATACCCATGAACCGGAGAATACATTCTTTTGTAATCTGTGTGATCGCACTTTTCGCGATGAAGCTGTCTATTTGGAGCACAATAAATGTCATTCGAATGCCAATAGTAATACATACACTTGTGGTGAATGTTTCAACACTTTTGACACACGAAGTCGTTTCAATGGACACATGCGCTCGATGCATGGCACCTTTATCAGCTGCGAGATTTGTTCCCGTGAGTTTGCCAGCGAAGCCACCTACAATGTTCATATGAAGAAGCATTTGATCATTGAACGAGATGTTCATATATGCAGAAATTGTGGTCAATTGAGTGAACATGAGTCTCGTATGCTTCAGCATATAGAAATGGAATCAACAAATTGTCATAATGCTGAAATCTACACTGAACTCTTACGAAATGCTTATATATGCGAAATGTGTTCATGTTATTTTCGTGAAAAATCTGATTTACATAAGCATCGTCAATCGGGTGTCCATAACAATGGTATATATTGGTGTCAGCCATGTGACAAAGAATTCACCGATATGAAAATCTATCGTCATCATTTAAGAAATTTTCAACAATTGAAAACGGATACAGAACATAGAAAATTGGAAATATGCTTATACTATATGTGTGATCAGATGGATTGCTTTGAATCATATACACATTGGAATTCCTTGTACACCCATAAGAGACGGACTCATAAAAACAATATGACGCCAGCTAAAATGAAAGATGACCAACAATCACCATCCACATCGAAATCAATCGAAGGCAGTGAAAAGAAAATGCAATGGCAATGTCAGTTTTGTGATAAGGAATGTCGTTCCAAAATGTCACTATCCGTTCATGTGGCACGCAGTCATAATAATGATAATGTGATTTGTTCTATATGCAATGCATCGTATAAGAATCAAGAGGCTTTGGATAAACATCATGCCTATTGGCATGAACCTATCGAGTGTCCCAAATGCTTTAAGATTGTAAAGAATCGTCGCAATTATGATACCCATGAGAATGTTGTTCATTCCAATAATAAACGTTATACCTGTGAGATTTGTAACAAGGGTTTCTATCACAACAGTGAAATGAAAGCACATCAGAAGCTTCATACTCAGCTGTTTAGTTGTAAGCACTGTAGTTTTACTACACGTAAGAAATCTTCTTTATCCGTTCATGTTATGGGTCAGCATTTGAAACGTTTTGCTTTCGAGTGCAAATTGTGCATGAAACGGTTTGGTCGTCGTCAGGGATTGACCGCACATATGCAACGTGTGCATAGCACTAAACATATTTGTCAGGAGTATATTACCGATGGCTGCAATCGTAGTTTTCCCTCAACATTGGCATTGAGTCAACATGTCAAGAAAGTACACAAGGGTACTATATTTCTGCACGATGAAGACGATAATGAGGAGGAGGAGGAGGAGGAAATGGAGCTAGACCTAGAGGAGGACGAGGTTGGTCCATCATCATCTAAGAAACGTTGTTTTCAAATAAATGATACCGAAATTGAGTTTATCGACGAAAGTGCATATGATAGTCAGGAATTTATAGATACAGAAAAAATCCAGAATGTCAAGTAG
- Protein Sequence
- MNMDKKLQKCLHCTVVNPKLKYHEIFKGLGAEIGLQQLLSNHFQFDVTEDSKKLQRLCEECVNSLIRFFDIDELKREQNAARAKTQPTEAANEVDVEKSIIDESCIYDLIFKSDDIAPADEEEVQEENDVPSKSEEVRIEDVIVEDRVTVIRLPNDEEAEEVDLETEHEDEQQVEHDLKEDNNVVIINFVEIKEKDDIVDLYGYLATAVKTNFETLSFDWSTSCKHCSLPLTNYQQLLNHMVQKHNGHFFDCPIEGCLTKGLQDKQYLAMHLVTHHGPVAEIPIYGSCPECKLTFSNILQYNKHSCSHVIKKKRGMQLYCEMCSIEFPSWKRFNFHNQFHLERHRPRVCFVCDYADNNIAELFQHLQYTHEPENTFFCNLCDRTFRDEAVYLEHNKCHSNANSNTYTCGECFNTFDTRSRFNGHMRSMHGTFISCEICSREFASEATYNVHMKKHLIIERDVHICRNCGQLSEHESRMLQHIEMESTNCHNAEIYTELLRNAYICEMCSCYFREKSDLHKHRQSGVHNNGIYWCQPCDKEFTDMKIYRHHLRNFQQLKTDTEHRKLEICLYYMCDQMDCFESYTHWNSLYTHKRRTHKNNMTPAKMKDDQQSPSTSKSIEGSEKKMQWQCQFCDKECRSKMSLSVHVARSHNNDNVICSICNASYKNQEALDKHHAYWHEPIECPKCFKIVKNRRNYDTHENVVHSNNKRYTCEICNKGFYHNSEMKAHQKLHTQLFSCKHCSFTTRKKSSLSVHVMGQHLKRFAFECKLCMKRFGRRQGLTAHMQRVHSTKHICQEYITDGCNRSFPSTLALSQHVKKVHKGTIFLHDEDDNEEEEEEEMELDLEEDEVGPSSSKKRCFQINDTEIEFIDESAYDSQEFIDTEKIQNVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00503490;
- 90% Identity
- iTF_00503490;
- 80% Identity
- -