Dbif004197.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila bifasciata
Gene Symbol
dmrta2
Assembly
GCA_009664405.1
Location
CM019044.1:11513277-11516731[+]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2e-27 7.5e-24 83.1 10.8 1 47 37 83 37 83 0.99
2 2 4 1.5e+04 -10.7 7.4 10 22 164 176 164 181 0.61

Sequence Information

Coding Sequence
ATGAGTCTGCCGTCGGGAGTGGATATGCAGAACCTAATGTCCCAGCATCCGGTACTCGGAGCCCTGCCGCCTGCGTTCTTCCTGCGCGCCGCCTCCGAGAGATATCAACGTACACCAAAGTGTGCCCGCTGCCGCAATCATGGCGTGGTCAGCGCCTTGAAGGGTCACAAGCGTTATTGCCGCTGGCGGGACTGTGTCTGCGCCAAATGCACTCTCATTGCGGAACGTCAGCGGGTCATGGCCGCTCAGGTTGCCTTGCGTCGCCAGCAGGCGCAAGAGGAGAATGAGGCACGGGAGCTGGGTCTCTTGTACACATCCGTTCCGGGCTCTGGCCAACAGAATGGCAGCGACAGTGTCACGCCCACACCACACAGTCCCACACACAGTGGCAATGGAGGACCAGCAAGTGTCGGATCGGGCCAGAATGGCGTGTTCCATGGTGGGATTCCCTCGCCACCGAGCGACGGCTTTGAAGCCAGCTCCACGCCCAatcatcaccagcagcagcagcagcaacagcaccaccaccaccagcagcagcatagccagcaccaacagcaccagcagccacAGCGGCAGCCGTCGCAGCAGCACTACAATGGCAATGAATCCGACACGGATGGACGCACCCGTTCCGAGCACCTCAGCGTTGGCTTCTCACCCACACGCACCGAGCTGGACGAGAGTCCCGTCTCGAAGCGAGGAGCAGCCCTGTCCAACGAGACGGACCAGGACACCGGCTCTGAGTCGGGTTCGCCGAGCAGTCCCCGGCCCAAGGTCGCTGGGCTGTTCAACCTGACCGCCAGTCTGTCGCCCGCCCGCACTGGTCCGCCCAGCTCGCCCGAGTCCGATCTGGATGTTGACTCGGCGCCGGATGAGGCCACGCCAGAGAATCTGAGCCTCAAGAAGGAGGACAGCCAGTCGCCGCCCAATACGCCCGCCGAGAATCTGCACCTGCTGCGCTCCTTTGGCAACGGCCATGCCCAGGGCTTCATGCCGTATCATCACTCGCAGTTCCTGGCCGCCGCCGGCCTGCCCACACACCACCACCCGGCGGCGCACTCTcccctccagcagcagcatctcggCCAGCAtccccagcaccagcagcagcaacagcaacagagatcTCCGATCGATGTCCTGATGCGAGTGTTTCCCAATCGCCGACGCAGCGACGTGGAGCAGCTGATGCAGCGGTTCCGCGGCGATGTCCTGCAGGCCATGGAGTGCATGCTGACCGGCGAGGACCTCGGCCAGACACCGCCCCCCCAGGTGCCACCGTCGCCGCCCTTCCCCATGAAGTCCGCCTTCTCGCCTCTGGTTCCACCCACCGTCTTTGGCTCGCCCACGCACCGCTACCATCCCTTCATGCAAGCCCACGCCAAGCGATTCCTCTCCGCCCCGTATACCGGCACGGGTTACCTACCCGGAGTTCTCAGTGCGGCAGATATCGAGCAGTCGGAGTCAAATGGCGCCGGCGGCATCGGCCTGGATCGCAGCAGCAATGCCGACTCCCAAGATTGA
Protein Sequence
MSLPSGVDMQNLMSQHPVLGALPPAFFLRAASERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEENEARELGLLYTSVPGSGQQNGSDSVTPTPHSPTHSGNGGPASVGSGQNGVFHGGIPSPPSDGFEASSTPNHHQQQQQQQHHHHQQQHSQHQQHQQPQRQPSQQHYNGNESDTDGRTRSEHLSVGFSPTRTELDESPVSKRGAALSNETDQDTGSESGSPSSPRPKVAGLFNLTASLSPARTGPPSSPESDLDVDSAPDEATPENLSLKKEDSQSPPNTPAENLHLLRSFGNGHAQGFMPYHHSQFLAAAGLPTHHHPAAHSPLQQQHLGQHPQHQQQQQQQRSPIDVLMRVFPNRRRSDVEQLMQRFRGDVLQAMECMLTGEDLGQTPPPQVPPSPPFPMKSAFSPLVPPTVFGSPTHRYHPFMQAHAKRFLSAPYTGTGYLPGVLSAADIEQSESNGAGGIGLDRSSNADSQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00480872; iTF_00919075; iTF_00490793; iTF_01319049; iTF_00335914; iTF_00336754; iTF_00338354; iTF_00904763; iTF_00339167; iTF_01319775; iTF_00506124; iTF_00507628; iTF_00517005; iTF_00532385; iTF_00540385; iTF_00805985; iTF_00519938; iTF_00568994; iTF_01327906; iTF_00493667; iTF_00552323; iTF_01320483; iTF_01322660; iTF_00496613; iTF_00509829; iTF_00572613; iTF_00560294; iTF_00479495; iTF_00500327; iTF_00470888; iTF_00513480; iTF_00545256; iTF_00557224; iTF_00607080; iTF_00568265; iTF_00498890; iTF_00502539; iTF_00519179; iTF_00576363; iTF_00609899; iTF_00482248; iTF_00522189; iTF_00802861; iTF_01325677; iTF_01327181; iTF_00546670; iTF_00559502; iTF_00901518; iTF_00492975; iTF_00499600; iTF_00543762; iTF_00551602; iTF_00599603; iTF_01321939; iTF_00485876; iTF_00570411; iTF_00548820; iTF_00573332; iTF_00616212; iTF_00577077; iTF_00516278; iTF_00566806; iTF_00595958; iTF_00473079; iTF_00495127; iTF_00619853; iTF_00498167; iTF_00521367; iTF_00530967; iTF_00537527; iTF_00518456; iTF_00525144; iTF_00542456; iTF_00478745; iTF_00497401; iTF_00558681; iTF_00574063; iTF_01321209; iTF_00544507; iTF_00564667; iTF_00511292; iTF_00553052; iTF_00593116; iTF_00501821; iTF_00522974; iTF_00554398; iTF_00582974; iTF_00476639; iTF_00528063; iTF_00597375; iTF_00512736; iTF_00535328; iTF_00585216; iTF_00590254; iTF_00606330; iTF_00536783; iTF_00578555; iTF_00563188; iTF_00486581; iTF_00616917; iTF_00480183; iTF_00533819; iTF_00601815; iTF_00561052; iTF_00591713; iTF_00596673; iTF_00473794; iTF_00538978; iTF_00617666; iTF_00495875; iTF_00506883; iTF_00538243; iTF_00569701; iTF_00520646; iTF_00525894; iTF_00477351; iTF_00501063; iTF_00571914; iTF_00574826; iTF_00601066; iTF_00610666; iTF_00918154; iTF_01556138; iTF_00580747; iTF_00581547; iTF_01326411; iTF_00471628; iTF_00505420; iTF_00547372; iTF_00489389; iTF_00527321; iTF_00533115; iTF_00557933; iTF_00608458; iTF_01570253; iTF_00917230; iTF_00565391; iTF_00917231; iTF_00548080; iTF_00553744; iTF_00602608; iTF_00474513; iTF_00563921; iTF_00583697; iTF_00605585; iTF_00541778; iTF_00575602; iTF_00481555; iTF_00514900; iTF_00512021; iTF_00529579; iTF_00528822; iTF_00562486; iTF_00592406; iTF_00472375; iTF_00915351; iTF_01356151; iTF_00589560; iTF_00604856; iTF_00832184; iTF_00517721; iTF_00531673; iTF_00536057; iTF_00539673; iTF_00509114; iTF_00598170; iTF_00614202; iTF_00804410; iTF_00508347; iTF_00579995; iTF_00566105; iTF_00914523; iTF_00545980; iTF_00588860; iTF_00595260; iTF_00619164; iTF_00603357; iTF_00504702; iTF_00803614; iTF_00805199; iTF_00916254; iTF_00510559; iTF_00582271; iTF_00585983; iTF_00567552; iTF_00919837; iTF_00604112; iTF_00612830; iTF_00541090; iTF_00594565; iTF_00488680; iTF_00491529; iTF_00524430; iTF_00478032; iTF_00490097; iTF_00613525; iTF_00485156; iTF_00593851; iTF_00526592;
90% Identity
iTF_00914523;
80% Identity
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