Dnig014404.1
Basic Information
- Insect
- Drosophila nigromelanica
- Gene Symbol
- dmrta2
- Assembly
- GCA_004149445.1
- Location
- SCDR01000108.1:137651-142158[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5 2.7e+04 -7.8 8.5 6 21 13 28 11 30 0.89 2 2 3.2e-27 1.7e-23 82.8 10.8 1 47 134 180 134 180 0.99
Sequence Information
- Coding Sequence
- atgaaagaaacCTCAAACAACCACCAGACGGCACAGCAGCTgtgccaccagcaccaccaccaccaccacgaaTCCGGCCACGAACCCAACCCGAACTCGCTCCACGCCGGcacattgctcatacgccgcgtcTGCCGCAGTCGCCGACGCCGTCGTCGCCGCCGCCTCGAGTgcacaaatttgtatacaCAAATATCACAAAAACTCTCAAAGAgagcgcgtgtgtgtgtgcgtgtgtgcgtattgCAATTTGAGTGtacttctgtgtgtgtgtgtgtgtgagtgtgcggcATGAGTTTACCGTCGGGCGTGGATATGCAGAATCTAATGTCACAGCATCCGGTGCTGGGCGCCCTGCCGCCCGCTTTCTTTCTGCGCGCCGCATCGGAACGCTATCAGCGCACTCCGAAATGCGCGCGCTGTCGCAACCATGGCGTGGTCAGCGCTCTGAAGGGTCACAAGCGCTACTGTCGCTGGCGGGATTGCGTCTGTGCCAAGTGTACGCTGATTGCGGAGCGGCAGCGCGTGATGGCCGCACAGGTCGCGCTGCGACGCCAGCAGGCGCAGGAGGAGAACGAGGCGCGCGAACTGGGACTGCTGTACACGTCGGTGCCCGGCGCCGGGCAGCAGAATGGCAGCGACAACGTCACGCCCAACTCGCACAGTCCGCAGTCCACGCATGCGGGCGGCAATGGGGGCGCGGCAGCGACACAAAACGGCGTCTTCCACGGCGGCATCCCCTCGCCGCCCAGCGACGGCTACGAGGCCAGCTCCACGCCGggccaccagcaacaacagcagcagcatcaacagcagcatcagcagcagcatcagcatcagcagcagcagcagcagcgacagtcgTCGCAGCATTACAATGGCAATGAATCCGACACGGATGGACGCACACGTTCCGAGCACCTCAGCGTCGGCTTCTCGCCCACACGCACCGAGCTGGACGAGAGTCCTGTTTCCAAGCGCGGCGCGGCGCTCTCGAACGAAACCGATCAGGACACGGGCTCCGAGTCCGGTTCACCCAGTAGTCCCAGGCCCAAGGTGGCCGGTCTCTTCAATCTGACCGCCAGTCTGTCGCCCGCTCGCACCGGTCCGCCCAGCTCGCCGGAGTCGGATTTGGACGTGGACTCGGCGCCCGACGAGCCCACGCCGGAGAATCTCAGCCTCAAGAAGGAGGACAGCAACTCGCCCCCGAACACACCCGCCGAGAATCTGCATCTGCTGCGCTCCTTTGGCAACGGCCATGCCCAGGGCTTTATGCCCTACCATCACACCCAGTTCCTGGCCGCTGCGGGCCTGCCCACGCATCATCCGGCCGCGCAGTCGcccatgcagcagcaacagcagcagcatttggcgcagcaccagcatcagcaccagcatcatcagcagcagcagcagcgttcgCCCATCGATGTGCTGATGCGCGTTTTTCCCAATCGCCGTCGCAGCGATGTGGAGCAGTTGATGCAGCGCTTTCGGGGCGATGTGCTTCAGGCCATGGAGTGCATGCTGGCTGGCGAGGATTTGACgcagacgccgccgccgccgccgcaggtGCCGCCATCGCCGCCGTTTCCGATGAAGTCCGCCTTCTCGCCGCTGGTGCCGCCCGCGGTCTTTGGCTCGCCCACCCATCCGCATCGCTACCATCCGTTCATGCAGGCGCACGCCAAGCGCTTCCTGTCCGCACCGTACGCCGGCACGGGCTACCTGACCGGCGTGCTCAGCAGCGCCGACATTGATCAGTCGGAGTCAAACGGCGCCGGAGGCATTGCCTTGGACCGCAGCAGCAATGCGGGCGACTCCCAGGattga
- Protein Sequence
- MKETSNNHQTAQQLCHQHHHHHHESGHEPNPNSLHAGTLLIRRVCRSRRRRRRRRLECTNLYTQISQKLSKRARVCVRVCVLQFECTSVCVCV*VCGMSLPSGVDMQNLMSQHPVLGALPPAFFLRAASERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEENEARELGLLYTSVPGAGQQNGSDNVTPNSHSPQSTHAGGNGGAAATQNGVFHGGIPSPPSDGYEASSTPGHQQQQQQHQQQHQQQHQHQQQQQQRQSSQHYNGNESDTDGRTRSEHLSVGFSPTRTELDESPVSKRGAALSNETDQDTGSESGSPSSPRPKVAGLFNLTASLSPARTGPPSSPESDLDVDSAPDEPTPENLSLKKEDSNSPPNTPAENLHLLRSFGNGHAQGFMPYHHTQFLAAAGLPTHHPAAQSPMQQQQQQHLAQHQHQHQHHQQQQQRSPIDVLMRVFPNRRRSDVEQLMQRFRGDVLQAMECMLAGEDLTQTPPPPPQVPPSPPFPMKSAFSPLVPPAVFGSPTHPHRYHPFMQAHAKRFLSAPYAGTGYLTGVLSSADIDQSESNGAGGIALDRSSNAGDSQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00487308;
- 90% Identity
- iTF_00509114;
- 80% Identity
- -