Dmer005317.1
Basic Information
- Insect
- Drosophila meridiana
- Gene Symbol
- dmrta2
- Assembly
- GCA_035045185.1
- Location
- JAWNPF010000055.1:28332646-28336766[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-27 1e-23 83.1 10.8 1 47 37 83 37 83 0.99 2 2 5 2e+04 -6.7 3.4 10 21 176 187 174 190 0.73
Sequence Information
- Coding Sequence
- ATGAGTTTACCGTCGGGCGTGGACATGCAGAACCTAATGTCACAGCATCCCGTGCTGGGCGCCCTGCCGCCCGCCTTCTTCCTGCGCGCCGCCTCGGAGCGCTACCAGCGCACGCCCAAGTGCGCCCGCTGCCGCAACCATGGCGTGGTCAGCGCGCTGAAGGGCCACAAGCGCTACTGTCGCTGGCGGGACTGCGTCTGTGCGAAGTGCACGCTGATTGCGGAGCGGCAGCGAGTGATGGCAGCACAGGTGGCGCTGCGACGCCAGCAGGCGCAGGAGGAGAACGAGGCGCGCGAGCTGGGCCTGCTGTACACCTCGGTGCCCGGATCCGGGCAGCAGAATGGCAGCGACAGCGTCACGCCCAACTCGCACAGTCCCACACACGGAGGCGGTGGcggtgggggcgtggctggtgcGGCACCAGCACAGAACGGCGTGTTTCACGGCGGCATACCCTCGCCACCCAGCGATGGCTACGAGGCGAGTCCCACGCCcagccaccagcagcagcagcaacagcagcagcagcaccaacaccaacaccaacatcagcagcaccagcagcaagcGTCGCGGCAGCAGCATTACAATGGCAATGAATCCGACACGGATGGACGCACTCGCTCCGAGCATCTCAGCGTCGGCTTCTCACCCACACGCACCGAGCTGGACGAGAGTCCCGTTTCCAAGCGCGGCGCAGCGCACTCGAATGAAACCGACCAGGACACGGGCTCCGAGTCGGGCTCACCCAGCAGCCCTCGGCCCAAGGTGGCCGGACTCTTCAACCTGACAGCCAGCCTATCGCCCGCACGCACCGGCCCGCCCAGCTCGCCGGAGTCCGACCTGGACGTGGACTCGGCGCCCGACGAGGCTACGCCCGAGAACCTGAGCCTGAAGAAGGAGGACAGCAACTCGCCGCCGAACACACCCGCCGAGAATCTGCATCTGTTGCGCTCCTTTGGCAACGGCCATGCCCAGGGCTTCATGCCCTATCACCACACGCAGTTCCTGGCCGCGGCGGGGCTGCCCACCCATCATCCTGCggcgcagctgccgctgcagcagcaactgcacgCCCAGgcccagcaccagcagcgctCTCCGATCGATGTGCTGATGCGCGTCTTTCCCAATCGCCGGCGCAGCGACGTGGAGCAGCTGATGCAGCGCTTCCGGGGCGATGTGCTGCAGGCCATGGAGTGCATGTTGGCTGGCGAGGACTTGACGCAGacgccgccgcctccgcccCCGACACAGGTGCCTCCCTCGCCGCCGTTTCCCATGAAGTCCGCCTTCTCGCCGCTCGTCCCACCCGCCGTCTTCGGCTCGCCCACCCATCCGCATCGCTATCATCCGTTCATGCAGGCGCACGCCAAGCGCTTCCTGTCCGCCCCCTATGCCGGCACGGGCTACTTGCCCGGCGTGCTGAGCAGCGCGGACATTGAGCAGTCCGAGTCGAACGGAGCCAGCGGCATGGCCCTGGATCGCAGCAGTAATGCAGGCGACTCCCAGGATTGA
- Protein Sequence
- MSLPSGVDMQNLMSQHPVLGALPPAFFLRAASERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEENEARELGLLYTSVPGSGQQNGSDSVTPNSHSPTHGGGGGGGVAGAAPAQNGVFHGGIPSPPSDGYEASPTPSHQQQQQQQQQHQHQHQHQQHQQQASRQQHYNGNESDTDGRTRSEHLSVGFSPTRTELDESPVSKRGAAHSNETDQDTGSESGSPSSPRPKVAGLFNLTASLSPARTGPPSSPESDLDVDSAPDEATPENLSLKKEDSNSPPNTPAENLHLLRSFGNGHAQGFMPYHHTQFLAAAGLPTHHPAAQLPLQQQLHAQAQHQQRSPIDVLMRVFPNRRRSDVEQLMQRFRGDVLQAMECMLAGEDLTQTPPPPPPTQVPPSPPFPMKSAFSPLVPPAVFGSPTHPHRYHPFMQAHAKRFLSAPYAGTGYLPGVLSSADIEQSESNGASGMALDRSSNAGDSQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00487308;
- 90% Identity
- iTF_00554398;
- 80% Identity
- -