Daur016372.1
Basic Information
- Insect
- Drosophila auraria
- Gene Symbol
- grn
- Assembly
- GCA_008042615.1
- Location
- VNJW01003239.1:54975-87831[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-19 5.7e-16 58.0 4.7 1 35 339 372 339 373 0.98 2 2 5.6e-19 2e-15 56.3 6.3 1 35 399 432 399 433 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACCTCAACAGCGGAGGCTGCCGCTCGCAGCTGGTATGACAGTCCGCGCTTAGGCGGCGGCtcctccggcggcggcggcaatgggGGCGGCGTCTCGCCCCAAACGAACGGCCTTGGCAGCGCCGGCAGCAGCCTGGCCCACAGCCACCACAGCCTCTCCAGCGGCGCCAGCTCAGCGGGCAGCAGCGTGGGAGCGGcccttggcggcggcggcggttcCGGGCTGGACACCAGCGACATGAGCGCCTTCTACGCGCTCGAGAGCAACGGACACCACCGGCGCTACTATCCCAGCTATCACCAGCACACATCCCGCATGCCCTCCACCCATGCCACGCCCCAGGTGTGCCGGCCGCACTTCCACACCCCGCTGAGTCCATGGCTGACCAGCGAGCACAAGTCCTTCGCCCCCGCCAGCGCCTGGAGCATGGGCCAGTTCGCCTGCCCGCAGGAGCCGCAGGTGGAGCACAAGCTGGGCCAGATGGGACAGGGCCATCAGACGACGGCCGCCGGTCAGCACTCGTTCCCCTTCCCGCCGACGCCACCAAAGGATTCCACGCCCGATTCCGTGCAAACCGGTCCATCCGAGTATCAGGCCGTGATGAACGCTTTCATGCACCAGCAGGCCACGGGCTCTACCTCACTGACGGACGCCAGCTGTGCGCTGGACATCAAGCCGTCGATCCAGAACGGCAGCGCGAACGGCTCCTCCGGCAATGGACCCATGCGTCACAGCATGGCTGCGGCGCAGGCgcaccatcaccaccatcatcatcacagCGGACACCACCACAGTGGATCGTCCTCCGGGGCGGGCATGCACTCGCTCGGCGGCTCTGTCGCCGGCATGGGCAGCATGAGCGGTGGCAGCGGCAATGGTGGgagcggaggaggagcgggATCCGGATCCCTGAGCGGGCACGGTGGATCTTCGGGCAACGGCAATCCCGGGCTGGACATCAAGCCCGTGCGGACGAAGCCGCGGACGAGCGCTGAGGGCCGCGAGTGTGTAAATTGCGGCGCCACATCGACGCCACTGTGGCGACGCGACGGAACGGGACACTATCTATGCAATGCCTGTGGCCTGTACTACAAGATGAACGGCCAGAACCGACCCCTGATCAAGCCAAAGCGAAGACTGaCCCTGCAATCGCTGCAGAGTGCGGCCAAGAGGGCGGGCACTTCCTGCGCCAACTGCAAGACCACAACCACAACCCTTTGGCGACGCAATGCCAGCGGTGAACCAGTCTGCAATGCCTGCGGATTGTACTACAAGCTGCACAATGTCAATCGTCCGCTCACAATGAAAAAGGAGGGCATCCAAACGCGTAACCGCAAGCTGAGCTCCAAgtccaagaagaagaagggcTTGGGCGGCGGCTGTCTGCCCATCGGCGGACACCTGGGCATGGGTGACTTCAAGCCTCTGGATCCCTCCAAGGGCTTTGGCGGCGGCTTCTCGGCCTCCATGGCGCAACATGGACACCTCTCGAGCGGACTGCATCCGGCACATGCGCACATGCACGGCAGCTGGTATACCGGCGGCATGGGAGCTCTGGGCGCCTCCAGCGGCCTGCAGGGCGGCTTCTCCACCGCCGGCTCTCTCGGCGGAGCGGTGGTGCCGCACTCGCAGCCTTACCACTTGGGCCTCAGTTCAATGGGCACCTGGCGCACTGACTACACGTGA
- Protein Sequence
- MDMTSTAEAAARSWYDSPRLGGGSSGGGGNGGGVSPQTNGLGSAGSSLAHSHHSLSSGASSAGSSVGAALGGGGGSGLDTSDMSAFYALESNGHHRRYYPSYHQHTSRMPSTHATPQVCRPHFHTPLSPWLTSEHKSFAPASAWSMGQFACPQEPQVEHKLGQMGQGHQTTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQATGSTSLTDASCALDIKPSIQNGSANGSSGNGPMRHSMAAAQAHHHHHHHHSGHHHSGSSSGAGMHSLGGSVAGMGSMSGGSGNGGSGGGAGSGSLSGHGGSSGNGNPGLDIKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASSGLQGGFSTAGSLGGAVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00611719; iTF_00490442; iTF_00524779; iTF_00617995; iTF_00588524; iTF_00507982; iTF_00512379; iTF_00533457; iTF_00486964; iTF_00590616; iTF_00532023; iTF_00613849; iTF_00565754; iTF_00594204; iTF_00541440; iTF_00562118; iTF_00489035;
- 90% Identity
- iTF_00609534; iTF_00524779; iTF_00617995; iTF_00533457; iTF_00594204; iTF_00590616; iTF_00532023; iTF_00613849; iTF_00565754; iTF_00541440; iTF_00562118; iTF_00489035;
- 80% Identity
- -