Dseg003310.1
Basic Information
- Insect
- Drosophila seguyi
- Gene Symbol
- grn
- Assembly
- GCA_008042675.1
- Location
- VNJU01002830.1:5073-37632[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-19 4.1e-16 58.2 4.7 1 35 302 335 302 336 0.98 2 2 5.2e-19 1.4e-15 56.4 6.3 1 35 362 395 362 396 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACCTCAACAGCGGAGGCTGCCGCTCGCAGCTGGTATGACAGTCCGCGCTTAGGCGGCGGCTcctccggcggcggcggcaatggGGGCGGCGTCTCGCCCCAAACGAACGGCCTTGGCAGCGCCGGCAGCAGCCTGGCCCACAGCCACCACAGCCTCTCCAGCGGCGCCAGTTCTGCGGGCAGCAGCGTGGGAGCGGCccttggcggcggcggcggttccGGACTGGACAGCAGCGACATGAGCGCCTTCTACGCCCTCGAGAGCAATGGACACCATCGGCGCTACTATCCCAGCTATCATCAGCACAcaTCCCGCATGCCCTCCACCCATGCCACGCCCCAGGTGTGCCGGCCGCACTTCCACACCCCGCTGAGTCCATGGCTGACCAGCGAGCACAAGTCCTTCGCCCCCGCCAGCGCCTGGAGCATGGGCCAGTTCGCCTGCCCGCAGGAGCCGCAGGTGGAGCACAAGCTGGGCCAGATGGGCCAGGGCCATCAGACGACGGCCGCCGGCCAGCACTCGTTCCCCTTCCCGCCGACGCCGCCAAAGGACTCCACGCCCGATTCCGTGCAAACCGGTCCATCGGAGTATCAGGCCGTGATGAACGCATTCATGCACCAGCAGGCCACTGGCTCTACCTCACTGACGGACGCCAGCTGTGCGTTGGACATCAAGCCCGGATCGTCCTCCGGGGCGGGCATGCATTCGCTTGGTGGCTCCGTCACTGGCATGGGCAGCATGAGTggtggcagcggcggtggcaacggaggaggaggaggagcgggaTCCGGATCCCTGAGCGGCCATGGCGGCGGATCGGCGGGCAATGGCAGTTCCGGACTGGACATCAAGCCCGTGCGAACGAAACCCCGGACGAGTGCTGAGGGACGCGAGTGTGTTAATTGCGGCGCCACATCGACGCCACTGTGGCGACGCGACGGAACGGGACACTATCTATGCAATGCCTGTGGCCTGTACTACAAGATGAACGGCCAGAACCGACCCCTGATCAAGCCAAAGCGAAGACTGACCCTCCAATCGCTGCAGAGTGCGGCCAAGAGGGCGGGCACATCCTGCGCCAACTGCAAGACCACAACCACAACCCTTTGGCGACGCAATGCCAGCGGCGAGCCCGTCTGCAATGCCTGCGGATTGTACTACAAGCTGCACAATGTCAATCGTCCGCTCACAATGAAAAAGGAGGGCATTCAAACGCGTAACCGCAAGCTGAGCTCCAagtccaagaagaagaagggcCTGGGCGGCGGCTGTCTGCCCATCGGTGGACACCTGGGCATGGGCGACTTCAAGCCACTGGACCCCTCTAAGGGCTTTGGCGGCGGCTTCTCGGCCTCCATGGCGCAACATGGACACCTCTCGAGCGGACTGCATCCGGCACATGCGCACATGCACAGCGGCTGGTATACCGGCGGCATGGGAGCTCTGGGCGCCTCCAGCGGCCTGCAGGGCGGCTTCTCCACCGCCGGCTCTCTGAGTGGAGCGGTGGTGCCGCACTCGCAGCCTTACCACTTGGGCCTCAGTTCGATGGGCACCTGGCGCACTGACTACACGTGA
- Protein Sequence
- MDMTSTAEAAARSWYDSPRLGGGSSGGGGNGGGVSPQTNGLGSAGSSLAHSHHSLSSGASSAGSSVGAALGGGGGSGLDSSDMSAFYALESNGHHRRYYPSYHQHTSRMPSTHATPQVCRPHFHTPLSPWLTSEHKSFAPASAWSMGQFACPQEPQVEHKLGQMGQGHQTTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQATGSTSLTDASCALDIKPGSSSGAGMHSLGGSVTGMGSMSGGSGGGNGGGGGAGSGSLSGHGGGSAGNGSSGLDIKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHSGWYTGGMGALGASSGLQGGFSTAGSLSGAVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00483331;
- 90% Identity
- iTF_00483331;
- 80% Identity
- -