Dbia009637.1
Basic Information
- Insect
- Drosophila biarmipes
- Gene Symbol
- grn
- Assembly
- GCA_018148935.1
- Location
- JAECYG010000101.1:11333744-11370320[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-19 4.4e-16 57.9 4.7 1 35 351 384 351 385 0.98 2 2 5.1e-19 1.5e-15 56.2 6.3 1 35 411 444 411 445 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACCTCAACAGCGGAGGCTGCCGCTCGCAGCTGGTACGACAGTCCGCGCTTAGGGGGCGGCTCCTCGGGCGGCGGCAACGGGGGCGGGGTCTCGCCCCAGACGAACGGCCTTGGCAGCGCCGGCAGCAGCCTGGCCCACAGCCACCACAGCCTCTCCAGCGGCGCCAGCTCGGCGGGCAGCAGCGTGGGCGTCGGGGCGGCCCTGGGCGGCGGCGGCGGATCCGGCCTGGACACTAGCGACATGAGCGCCTTCTACGCGCTGGAGAGCAACGGACACCACCGGCGCTACTACCCGAGCTACCACCAGCACACATCCCGCATGCCCTCCACCCATGCCTCGCCCCAAGTGTGCCGGCCCCACTTCCACACCCCGCTGAGTCCCTGGCTGACCAGCGAGCACAAGTCCTTCGCCCCCGCCAGCGCCTGGAGCATGGGCCAGTTCGCCTGCCCCCAGGAGCCGCAGGTGGAGCACAAGCTGGGCCAGATGGGCCAGAGCCACCAGACGACGGCCGCCGGACAGCACTCGTTCCCCTTCCCGCCGACGCCGCCAAAGGACTCCACGCCCGACTCCGTGCAAACCGGTCCATCCGAGTACCAGGCGTACAGCAGCGGCGGCGGGAGTGGCGGGGGCGGTGGAGGAGGCGGCGGTGGCTCCGGTGGCTACGACACCAGCAGCTATGCCTCCTACCACCATGCGGCGGCGCACCACCAGGCAGCGGCGGTGGCGGCGGCGAATATGTTCCAAAGTTCCTCGGTGGCCGCGGCTGCAGTGCGTCACAGCATGGCCGCTGCGCAGGTGCACCACCACCACCATCACCACCACAGTGGCCACCACCATGGCGGCTCGTCCTCCTCGGGCATGCACGGCCTGGGCGGCTCGGTGGGCGTGGGCGGCACCGCCGGCATGGGCAGCATGAGCGGCAACAGCGGCGGAGCGGGATCGCTGAGCGGTCACAGTGGCGCCGGCAGCAACGCGGGCAGCAGCGGTCTGGATGTGAAGCCCGTGCGGACCAAGCCGCGGACAAGTGCCGAGGGACGCGAGTGTGTGAACTGTGGCGCCACATCGACGCCACTGTGGCGACGCGACGGAACGGGACACTATCTGTGCAACGCCTGTGGCCTGTACTACAAAATGAACGGCCAGAACCGACCCCTGATCAAGCCAAAGCGAAGACTGACCCTGCAATCGCTGCAGAGTGCGGCCAAGAGGGCGGGCACATCCTGCGCCAACTGCAAGACCACAACCACAACCCTTTGGCGACGCAATGCCAGCGGCGAGCCCGTGTGCAACGCTTGCGGATTGTACTACAAGCTGCACAATGTCAACCGTCCTCTGACAATGAAAAAGGAGGGCATTCAGACGCGTAATCGCAAGCTGAGCTCCAAGTCCAAGAAGAAGAAGGGTCTCGGCGGCGGCTGTCTGCCCATGGGAGGACACCTGGGCATGGGCGACTTCAAGCCGCTGGATCCCTCGAAAGGATTCGGCGGCGGCTTCTCGGCCTCCATGGCACAACATGGACACCTCTCGGGCGGACTGCATCCGGCACATGCGCACATGCACGGCAGCTGGTACACCGGCGGCATGGGCGCCCTGGGAGCCTCGAGCGGACTGCAGGGCGGCTTTTCCACCGCCGGCTCTCTCGGCGGGGCGGTGGTGCCCCACTCGCAGCCCTACCACTTGGGACTCAGTTCGATGGCCCATGCCCATGCCATGTCATCACATGTCCGGCCAGCCAACTCCAAACATGGCCAGTGGTCCAGTGGTCGCATGGTTCTGGGCCTGGGCCTGGTCATATCAAATGCTTAA
- Protein Sequence
- MDMTSTAEAAARSWYDSPRLGGGSSGGGNGGGVSPQTNGLGSAGSSLAHSHHSLSSGASSAGSSVGVGAALGGGGGSGLDTSDMSAFYALESNGHHRRYYPSYHQHTSRMPSTHASPQVCRPHFHTPLSPWLTSEHKSFAPASAWSMGQFACPQEPQVEHKLGQMGQSHQTTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAYSSGGGSGGGGGGGGGGSGGYDTSSYASYHHAAAHHQAAAVAAANMFQSSSVAAAAVRHSMAAAQVHHHHHHHHSGHHHGGSSSSGMHGLGGSVGVGGTAGMGSMSGNSGGAGSLSGHSGAGSNAGSSGLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPMGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSGGLHPAHAHMHGSWYTGGMGALGASSGLQGGFSTAGSLGGAVVPHSQPYHLGLSSMAHAHAMSSHVRPANSKHGQWSSGRMVLGLGLVISNA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00483331;
- 90% Identity
- -
- 80% Identity
- -