Dvul001804.1
Basic Information
- Insect
- Drosophila vulcana
- Gene Symbol
- grn
- Assembly
- GCA_008042555.1
- Location
- VNJP01001885.1:239741-272088[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-19 7.5e-16 58.0 4.7 1 35 342 375 342 376 0.98 2 2 7.6e-19 2.6e-15 56.3 6.3 1 35 402 435 402 436 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACCTCAACAGCGGAGGCTGCCGCTCGCAGCTGGTATGACAGTCCGCGCTTAGGCGGCGGCTcctccggcggcggcggcaatggGGGCGGCGTATCGCCCCAAACGAACGGCCTTGGCAGCGCCGGCAGCAGCCTGGCCCACAGCCACCACAGCCTCTCCAGCGGCGCCAGTTCTGCGGGCAGCAGCGTGGGAGCGGcccttggcggcggcggcggttccGGACTGGACGGCAGCGACATGAGCGCCTTCTACGCCCTCGAGAGCAATGGACACCACCGGCGCTACTATCCCAGCTATCATCAGCACACATCCCGCATGCCCTCCACCCATGCCACGCCCCAGGTGTGCCGGCCGCACTTCCACACCCCGCTGAGTCCATGGCTGACCAGCGAGCACAAGTCCTTCGCCCCCGCCAGCGCCTGGAGCATGGGCCAGTTTGCCTGCCCGCAGGAGCCGCAGGTGGAGCACAAGCTGGGCCAGATGGGCCAGGGCCATCAGACGACGGCCGCCGGCCAGCACTCGTTCCCCTTCCCGCCGACGCCGCCAAAGGACTCCACGCCCGATTCCGTGCAAACCGGTCCATCTGAGTATCAGGCCGTGATGAACGCATTCATGCACCAGCAGGCCACGGGCTCTACCTCACTGACGGACGCCAGCTGTGCGTTGGACATCAAGCCGTCGATCCAGAACGGCAGCGCGAACGGCTCCTCCGGCAGCGGACCCAGCCAGATGCGTCACAGCATGGCTGCGGCGCAGGCacaccaccatcaccatcaccatcatagTGGGCACCACCACAGCGGCTCGTCCTCCGGGGCGGGCATGCATTCGCTTGGTGGCTCCGTCACTGGCATGGGCAGCATGAGTGGTGGCAGCGGTGGTGgaaacggaggaggaggagcgggaTCCGGATCCCTGAGCGGCCACGGCGGCGGATCGGCGGGCAACGGCAGTTCCGGACTGGACATCAAGCCCGTGCGGACGAAACCCCGGACGAGCGCTGAGGGACGCGAGTGTGTTAATTGCGGCGCCACATCGACGCCACTGTGGCGACGCGACGGAACGGGACACTATCTATGCAATGCCTGTGGCCTGTACTACAAGATGAACGGCCAGAACCGACCCCTGATCAAGCCAAAGCGAAGACTGACCCTCCAATCGCTGCAGAGTGCGGCCAAGAGGGCGGGCACATCCTGCGCCAACTGCAAGACCACAACCACAACCCTTTGGCGACGCAATGCCAGCGGCGAACCTGTCTGCAATGCCTGCGGATTGTACTACAAGCTGCACAATgTCAACCGTCCGCTCACAATGAAAAAGGAGGGCATCCAAACGCGTAACCGCAAGCTGAGCTCCAAgtccaagaagaagaagggctTGGGCGGCGGCTGTCTGCCCATCGGTGGACACCTGGGCATGGGCGACTTCAAGCCACTGGATCCCTCCAAGGGCTTTGGCGGCGGCTTCTCGGCCTCCATGGCGCAACATGGACACCTCTCGAGCGGACTGCATCCGGCACATGCGCACATGCACGGCAGCTGGTATACCGGCGGCATGGGTGCTCTGGGCGCCTCCAGCGGCCTGCAGGGCGGCTTCTCCACCGCCGGCTCTCTTGGTGGAGCGGTGGTGCCGCACTCGCAGCCTTACCACTTGGGCCTCAGTTCGATGGGCACCTGGCGCACTGACTACACGTGA
- Protein Sequence
- MDMTSTAEAAARSWYDSPRLGGGSSGGGGNGGGVSPQTNGLGSAGSSLAHSHHSLSSGASSAGSSVGAALGGGGGSGLDGSDMSAFYALESNGHHRRYYPSYHQHTSRMPSTHATPQVCRPHFHTPLSPWLTSEHKSFAPASAWSMGQFACPQEPQVEHKLGQMGQGHQTTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQATGSTSLTDASCALDIKPSIQNGSANGSSGSGPSQMRHSMAAAQAHHHHHHHHSGHHHSGSSSGAGMHSLGGSVTGMGSMSGGSGGGNGGGGAGSGSLSGHGGGSAGNGSSGLDIKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASSGLQGGFSTAGSLGGAVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00483331;
- 90% Identity
- iTF_00483331;
- 80% Identity
- -