Datr006054.1
Basic Information
- Insect
- Drosophila atroscutellata
- Gene Symbol
- egg
- Assembly
- GCA_035041605.1
- Location
- JAWNLA010000093.1:7699283-7703834[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-13 2.5e-10 39.7 0.0 5 75 930 993 927 995 0.90
Sequence Information
- Coding Sequence
- ATGGCCGCGGAATCTACGACATCAATTGACGCCTTGGCCAAATCAGCTGCAAGTGAATTGGCTTTGCCGGCAACGGAGACAGCCGCTGAGGCAAAAACTATCACAATGGAGATGGAGAACGAGAAGGTCGAGGAGGAGAAACTGACTGCTTGCGGAGATCCTATGGAATTAGATGATATTCCGGTTGATCCGTCGATAGTGTCAGATTCTGAGAAGAGCAGTGAACCAACCAccagtaaaagtaaaaaacatgaaaataaagaaTCGAAAGCGAACGTCTTTGCCGCAGATGCGGATGCTCCCGACTTAGAAGAAAGTATCAGCGAAATAAAAGCAATGGAAAATTCTAAAGAAGATTCGGACTCTTTAATAGAAAAACTTAATTCGGATAAGCCAATCGAAACTGATTTGGACAGCAGCATTGAACTAATCAGTAGTCCCATTCTAGATGAAACTGGTCCTGCTGAGGAGGTAACTGAAACTGCAAGTACAAAAAAAGTTGCAGACTCTACAACAGATGGAGCTGTTTCACTCAAACCAAACGAAGCCGATTTGGATAACAGTATTGAACTGATTGAGAGTCCTGCTGTGGAAGAGTTGCCTTATAAGGAGAATTTGAAGGATGCTACAGTGGATAGCGACAGCAGCGTTGAGTTGATTAGCAGTCCTGACAAAGATATAGACGATGCCAACAAAGACGTGTCCAATGAAGAAACACGATCTAATTTGGAagatgaaaaatcaaaaagcacATCCCAAGACAATGATGTAGATGACGAGAAAAAGCTAATTCAAAACGAAGAGATCACAGAAGCCATATCAATGGATATGGAAGAAGCGAAGACCACAAGTCAATCGGATGAAGCCACTACTTCGAAAACCATAATTGACGAATTTTCTCACACTTCCCCCAAATCCTCAGCAGAATTTCACACAGATGAACAAGAGATGACAGATAATGCAGCTAAGTCTGAGACACAGGAAGAACCAGAAAGTTCGGAGCCTATGGAAGTAGATGAGCTGCCcaaaaataacgaaaacaGTTGTCTAGTTGAGATAAACACCGACGGTGACGCGAAAGAAAATCTCGAATTTGAATCGGATTCTGAAATCTATTACAAAAAGGACTGcctcaattgcaattgccagaAGATGCATAAGCAGTACATGCTGGCGAGCCTGGCTGCGCTCAACTACTACAAGGTGCCCAGAAAGGCACACAAGCGACAATACATTTGCATGGGCTGCTATGACACAGCAATGGATATGTACCAGGATTTTACTGGTTTCCTAGTGGCCAAACAGCCTCTGCTGTTGCGTAACTTCAAGCAGGAGCACGCAGACTTTGTGGCTCTGGACAGCAGTGACGAAGAGGAAAATTGTCAAGAGCAGGACAAATCCGAATTTTCGTCAAATGATTTGCAACTGATTGATGATGAACTAGAGGATGCTATCAAAACTGTTATGGGCAGAGTGGAGCTAGACGACCAGATGGCTTGGTCCAAGACTATATTACAATCAAAAACACAGCGTATAGGGCGCGAATTCGAATTGGCCAACCAAGAACTCAGCAAGCTACAGAATATGGCtgacaaaatgcattttgcccTGTACAGCTCCTGCCAAGTGGTGCACAAACACATGCCTGCGCTTGATCTCTACCATAATTTTCACGATTATGTGCAAGTGCCACCGGCGGGTGAGATCGAGCGACCTCCGATTCAACTAAACGAGACCTACTACGCTGTGAAGAACAAAGCTATTGCCAGCTGGGTGTCGGTCAAAGTGATCGAGTTTACAGAGAGTTCAACAGTGGGCGGCATTATGGTAAAAAGCTACAAGATCAAGTATCTCAATACACCATATCAAATGGTTAAAACTATAACAGCCAAACATTTAGCCTACTTCGAGCCGCCGCCAGTCCGCCTGACTATTGGCACTCGCGTCATAGCCTACTTTAATAACAGCACCTTGTCGCGCGGCAAGGAGAAGTGCGTCGTACCCAGCGCATTCTATCCGGGCATTATAGCCGAGCCTCTGAAACAGACCAATAGCTTTAGGTATTTAATCTTCTATGATGATGGCTACACACAGTATGTGCAGCACAGCGATGTGCGTTTGGTTTGTCTGGCATCGGAGAAAGTCTGGGAGGATGTGCATCCCGGCTCGCGAGACTTTATACAAAAGTATGTGGAAAAATACTCAGTGGACCGACCAATGGTGCAATGCACACGTGGCCAAAACATGAACACCGAATCCAACGGCACATGGCTGTATGCGCGCGTGATTGACATTGATTGCAGTCTGGTGCAGATGCAATTCGATGATGAAAAGAATCACACAGAGTGGATCTATCGTGGCTCCCTGCGTCTGGGTCCAGTATTCAAGGAGACACAAAATGCGCTTAACAGCGCCAATGCCGTGCAACAGCACCGTATGCCGCGCCGCACCGAACCCTTCATACGCTACACTAATGAGATGGAGACGACCACCATTTACCAGCAAATGCGTGCAATTGCGCGTAAGAGCAGCTCCATGCCACAGAACGTTAACACGTCACCCTCatcctctgctgctgcggcagctgccaatgctgctgctgctgcagcagctcgcAACACCGTTCGCCATTTGAACAACTCAACCATCTACGTAGACGATGAGAACCGGCCCAAGGGACATGTTGTCTACTTTACGGCAAAACGCAACTTGCCGCCCAAAATGTACTCGTACCACGAATGCAGCCCAGCCTGTTTGTTCAAGATTGTGCATCGCCTGGATAGCTACAGTCCGTTGGCTAAGCCGCTGCTTTCCGGCTGGGAGCGCTTGGTGTTCAAGCAGAAGGCAAAGCGCAATGTCGTCTACCGCGGACCTTGTGGCAAGAGTTTTCGCAATCTAGCCGAAGTGCACATGTATCTGCGTGCCACGGATAATgttttaaatgttgaaaacttTGATTTTACGCCAGATTTGCGCTGCCTGGCAGAGTACTCTATTGATCCAACAATTGTTAAGGAGGCTGACATATCGAAGGGACAAGAGAAAATGGCCATACCTCTGGTAAACTACTATGACAACACATTGCCGCCGCCCTGCACCTATGCCAAGCAGCGCATACCCACAGAGGGAGTGCATTTGAATCTCGACGAGGAGTTTTTGGTGGGCTGTGACTGCGAGGATGATTGCTCGGACAAATCCAAATGCGCCTGTTGGCAGCTAACTGTTGGGGGTGTCAAATACTGCAACCCCAACAAGCCCATTGAGGAGATCGGCTACCAATATAAGCGCCTTCACGAGCATGTTCCCACCGGCATCTACGAATGTAACTCGCGGTGCAAGTGCAAAAAGAACTGCCTAAATCGAGTGGTTCAGCATTCGCTGGAAATGAAGCTGCAGGTCTTCAAGACGTCGAATCGGGGCTGGGGTCTGCGATGCGTAAACGATATACCAAAGGGTgcattcatttgtatttatgcggGCCACTTACTCACCGAAACAATGGCCAACGAGGGAGGATTGGATGCAGGCGATGAGTACTTTGCTGACTTGGATTACATTGAGGTGGCCGAGCAACTGAAGGAGGGCTATGAATCGGATGTTGAACACTCGCCAGCGGAGGAGGATGAAGACACCTACGCCCCAGATCCGGAGGACGATGCTGACTTCACGCCCACCAAGTATTATCAGCCTCGCAAAAAGGATAAGCTGCGTGCATCGCGAAGCCACTCAAACAATTCAAATGAGCCGGATTCGCAGGAGCGCGCAGTTATAAATTTCAATCCCAATGCCGACCTAGATGAAACAGTGCGCGAGAACTCAGTGCGCCGGCTCTTTGGCAGAGACGAGGCGCCCTACATTATGGATGCAAagacaactggcaacttggGTCGTTACTTTAATCATTCATGTTCACccaatttatttgtgcagAACGTGTTTGTGGACACGCATGATCTTCGATTTCCCTGGGTCGCGTTCTTCTCGGTCATGCACATAAGGTCCGGAACCGAACTGACTTGGAACTATAACTACGAGGTGGGCGTGGTGCCCGGCAAAGTTCTCTATTGTCAATGTGGAACCGCCAATTGTCGGGTGCGTTTACTTTAA
- Protein Sequence
- MAAESTTSIDALAKSAASELALPATETAAEAKTITMEMENEKVEEEKLTACGDPMELDDIPVDPSIVSDSEKSSEPTTSKSKKHENKESKANVFAADADAPDLEESISEIKAMENSKEDSDSLIEKLNSDKPIETDLDSSIELISSPILDETGPAEEVTETASTKKVADSTTDGAVSLKPNEADLDNSIELIESPAVEELPYKENLKDATVDSDSSVELISSPDKDIDDANKDVSNEETRSNLEDEKSKSTSQDNDVDDEKKLIQNEEITEAISMDMEEAKTTSQSDEATTSKTIIDEFSHTSPKSSAEFHTDEQEMTDNAAKSETQEEPESSEPMEVDELPKNNENSCLVEINTDGDAKENLEFESDSEIYYKKDCLNCNCQKMHKQYMLASLAALNYYKVPRKAHKRQYICMGCYDTAMDMYQDFTGFLVAKQPLLLRNFKQEHADFVALDSSDEEENCQEQDKSEFSSNDLQLIDDELEDAIKTVMGRVELDDQMAWSKTILQSKTQRIGREFELANQELSKLQNMADKMHFALYSSCQVVHKHMPALDLYHNFHDYVQVPPAGEIERPPIQLNETYYAVKNKAIASWVSVKVIEFTESSTVGGIMVKSYKIKYLNTPYQMVKTITAKHLAYFEPPPVRLTIGTRVIAYFNNSTLSRGKEKCVVPSAFYPGIIAEPLKQTNSFRYLIFYDDGYTQYVQHSDVRLVCLASEKVWEDVHPGSRDFIQKYVEKYSVDRPMVQCTRGQNMNTESNGTWLYARVIDIDCSLVQMQFDDEKNHTEWIYRGSLRLGPVFKETQNALNSANAVQQHRMPRRTEPFIRYTNEMETTTIYQQMRAIARKSSSMPQNVNTSPSSSAAAAAANAAAAAAARNTVRHLNNSTIYVDDENRPKGHVVYFTAKRNLPPKMYSYHECSPACLFKIVHRLDSYSPLAKPLLSGWERLVFKQKAKRNVVYRGPCGKSFRNLAEVHMYLRATDNVLNVENFDFTPDLRCLAEYSIDPTIVKEADISKGQEKMAIPLVNYYDNTLPPPCTYAKQRIPTEGVHLNLDEEFLVGCDCEDDCSDKSKCACWQLTVGGVKYCNPNKPIEEIGYQYKRLHEHVPTGIYECNSRCKCKKNCLNRVVQHSLEMKLQVFKTSNRGWGLRCVNDIPKGAFICIYAGHLLTETMANEGGLDAGDEYFADLDYIEVAEQLKEGYESDVEHSPAEEDEDTYAPDPEDDADFTPTKYYQPRKKDKLRASRSHSNNSNEPDSQERAVINFNPNADLDETVRENSVRRLFGRDEAPYIMDAKTTGNLGRYFNHSCSPNLFVQNVFVDTHDLRFPWVAFFSVMHIRSGTELTWNYNYEVGVVPGKVLYCQCGTANCRVRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00564645;
- 90% Identity
- iTF_00495106; iTF_00497380; iTF_00566786; iTF_00521347; iTF_00496593; iTF_00574043; iTF_00558656; iTF_00593094; iTF_00597355; iTF_00609878; iTF_00619833; iTF_00528041; iTF_00560265; iTF_00607059;
- 80% Identity
- -