Basic Information

Insect: Drosophila atripex
Gene Symbol: -
Assembly: GCA_035045925.1
Location: JAWNOP010000069.1:7345239-7348297[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2.3e-06 0.00018 21.8 3.4 1 23 206 229 206 229 0.97

2 17 8.8e-05 0.0068 16.8 0.3 1 23 236 258 236 258 0.97

3 17 0.2 15 6.3 0.1 2 23 290 311 289 311 0.94

4 17 0.00013 0.01 16.3 1.0 1 23 400 423 400 423 0.97

5 17 0.23 18 6.1 0.6 1 19 430 448 430 451 0.93

6 17 0.023 1.8 9.2 5.3 1 23 460 482 460 482 0.95

7 17 6.5e-06 0.00051 20.4 0.4 1 23 489 512 489 512 0.97

8 17 4.6e-05 0.0036 17.7 1.0 2 23 520 541 519 541 0.96

9 17 0.017 1.3 9.6 0.1 2 21 568 587 567 588 0.94

10 17 0.0042 0.33 11.5 2.7 1 23 637 660 637 660 0.98

11 17 0.025 1.9 9.1 1.3 1 23 697 720 697 720 0.96

12 17 0.00012 0.0093 16.4 1.6 2 23 753 775 752 775 0.95

13 17 0.0017 0.14 12.7 0.2 1 23 789 811 789 811 0.95

14 17 1.7e-05 0.0013 19.1 1.0 1 23 817 839 817 839 0.99

15 17 3.1e-07 2.4e-05 24.5 2.6 1 23 845 867 845 867 0.98

16 17 3.5e-05 0.0027 18.1 3.8 1 23 873 895 873 895 0.97

17 17 2.4e-05 0.0019 18.6 0.5 1 22 901 922 901 925 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2.3e-06	0.00018	21.8	3.4	1	23	206	229	206	229	0.97
2	17	8.8e-05	0.0068	16.8	0.3	1	23	236	258	236	258	0.97
3	17	0.2	15	6.3	0.1	2	23	290	311	289	311	0.94
4	17	0.00013	0.01	16.3	1.0	1	23	400	423	400	423	0.97
5	17	0.23	18	6.1	0.6	1	19	430	448	430	451	0.93
6	17	0.023	1.8	9.2	5.3	1	23	460	482	460	482	0.95
7	17	6.5e-06	0.00051	20.4	0.4	1	23	489	512	489	512	0.97
8	17	4.6e-05	0.0036	17.7	1.0	2	23	520	541	519	541	0.96
9	17	0.017	1.3	9.6	0.1	2	21	568	587	567	588	0.94
10	17	0.0042	0.33	11.5	2.7	1	23	637	660	637	660	0.98
11	17	0.025	1.9	9.1	1.3	1	23	697	720	697	720	0.96
12	17	0.00012	0.0093	16.4	1.6	2	23	753	775	752	775	0.95
13	17	0.0017	0.14	12.7	0.2	1	23	789	811	789	811	0.95
14	17	1.7e-05	0.0013	19.1	1.0	1	23	817	839	817	839	0.99
15	17	3.1e-07	2.4e-05	24.5	2.6	1	23	845	867	845	867	0.98
16	17	3.5e-05	0.0027	18.1	3.8	1	23	873	895	873	895	0.97
17	17	2.4e-05	0.0019	18.6	0.5	1	22	901	922	901	925	0.90

Sequence Information

Coding Sequence: ATGAAGCTGCCGGTTACCTGTCGCACCTGCGACTCTACGGACACCGACAATCTTATGGAACTGGCCACGCCCTCGAAAAAATATCCGGACAAGCTGCTATCCGATATCTTAGCCGAGCTAACAGACATCAATGTGGATGTCACTGCTGGACAGAAAGTGCCACAAGCCTTGTGCCTCGCTTGCACCAAGAAATTAATGGCTGCTTATTGCTACGTGAAGCAGGCGCTGGTCGCCAACGAACTGCTGATGAAGCATCTCAAGAGGGTGGTACCCGCCGTCAGCGCCACCGACTGCTTGCTGGAAGCGCCAATGGAGCTGTGTGCTGAGCAGCACGTGAAGGTTAAGATGGAGACAGAGGATGAGGAAGATGTTAGTGCCAACGATGTGAGAATAGCTTGCTCGGAGCTAACCGAACCGGATGAACACGATGTGGAGAACAAGAAATCTGTTGATCCGCTGACTATGATAGATTCGGTTAAGATGGAGACAGATCCATCGAGCGTGGACTATGCAGTGGAAGGGGAATTCATAACGGATGTTGAGGACGAAGATTCCCTGGACAACTTGCCCCTCTTTAAAAGAAttgaaaaatggaaagaggGCCGGAATACCTTATTCAAGTGCGACGATTGCCCCCGGAAATTCAAGCAATCAGAGTACCTAAAGAGACACCAGACCCGTTTCCACAAGCCCGAGACGCAGTGGTTCGCATGCTCCCTCTGCGTTCGCAAGTTTAGTAGCAGCGAAGCTTTAGAAACCCACCTGAAAGTCCACAGAAATTCTAAACGATCTTCCAATGTAAGCGAGCACAAGAAGGCCAAGACTGTAGATTTGAATCTCTGCAAGCCTCATGGCTACAAACTCATCGAGTGTATGATCTGTCAGAGTCAGTACAATAAGATTGCCGATCTGCGACGACATTTAGAGGAGCACCCGGACATCGTCAACCTGAGCTTGCGTCCGAATATGGGAGCAAACGAACTGGCAGAACTGTTTTATCCCGACTCCAAACACCTGGACGAGGATCgtttgattaatttaattcaaaaggACCTTGCAGCAGGCATTTACCAGCGTTTCTATTCCATCACCAATCAAAGTGGGTATGAAATGGACTTGGACAGCTCCGAGACAGAAAGTGATTTGGATGGAGATCCGGAGGATGCGTATAGGCGAAAGAAATACCGCAAGCCCAGCTACATCTGTGAACTGTGCCAACAGAAATTTCCCCGAAAATATCTTCTGTACGACCATCAACGTCTGTCTCACAGTTGGTCGGAAGCTCCTCATGTCTGCGGGCGGTGCGATGGGCGATTCGTCAGTCTCCAGCTGCTGAGGCATCACAACGAGTCGCAGTGCAGAAATGCGCAAAAGAGATTCTTGTGTCACAAGTGTCCACTGCGCTTCCGTTGGAAACACAATCTGAAGGCCCATTTCCGGGAGCACAGGATTACGAATCAAACCTTCGAGTGTCCCGAATGCAAGAGGGTCTTCGACAAAAAGAAGTCTCTCACAGTTCACCTGCTCAGTGTTCATGCAGAGGAGTCGAAGCTGATTCCGTGCCAGTGGTGTAGTCGAAAATTCTACCGTCAGGATTATTTGGTAAAGCATCTAAAGAGGCATGGCCTCAAGGAGCAGGACATTCCACTAGCCGAGACACTGATTGCGGCCACATCGCGTCCGAACGGAGCAAAGCGAATCACCTGCCGGATGTGTAACCTGCACTTTGAGCGCATCGTGGATCTGCGAGCTCATATCCAACTAGAACTAAAGCTATCTTTGTCTCTGCACCAAAGCTACGACTCCCCGCACAATTATTCGATAACCAATGAATCTGGCTTCGAGCTGCAACTGGAGGACTCGGAAACGGACGATGAAATTCCGTCAGGGTCCAGCAATCGTCCTGTTTACGTGTGCGAGCTCTGCAGCGTACAGTGCAAGCGGAAGTTTGAAATGATCCAGCACCAGAGAACAATGCACCGATTTGATAAAATGCCACACGAGTGCGATGGATGCATCTTTAAGTGTGTGTCAAAGAGCATCATGGATCATCATCGCCTGGACCAGTGCAATAGTTCGGAGAAGAAGCACACGTGCGCCAAGTGCTCCTACAAATTCATGTGGCCAGAGAATCTCGAGCAGCACTTGCGCCTGCAGCACACTAATACTGCTAGCAGTGATTCCCCAGGAGTCAAGCGACTCAGTGGTCCCAGAGACTTAGACAAAGAGGCGTCGGAGGACGGTGTGCCGCTGTTGCAGTGCCCACACTGTGATCGCACCTACCAGATGAAGTCGCGACTCAACAACCACATCCGTGATGTTCATGTGAATGGCGATCGTAAGCGGAAGGAGGCAGTAAAGCGCTTCCTCTGTTCGCTGTGTGGTATGGAAACCCAATCCGCTGCATCCCTTGTTACCCACATGCGTCGGCACACCGGCGAAAAGCCCTTTAAATGCGATCTGTGTGAGATGGCTTTCCCCCGTCATTCAGAACTAGCATCGCATCGTCGAATGCACACCGGCGAAAAGCCATTCCATTGCACAGTTTGCGGCAAAGATTTCGCCCGCTCCGATAAGCTGAAGCGCCACATGCTCACTCACAGTGGCCTCAAACCGCACAAGTGCACGTACTGCGAGAAGAGCTATCGACAGGCCAAGGACCTCAAGCTCCACTTGCAGCAGCACACAGGCGAATGCCCTTTCGTGTGTGGGACCTGTGGCGAGCGCTTTATCCAGAGCAGCACATTGGAGAAACATCGCCTGATGCGAAGACACTTCGACGAAGGCGAAGCGTGGATTAGAAGTCAAAAGTAG
Protein Sequence: MKLPVTCRTCDSTDTDNLMELATPSKKYPDKLLSDILAELTDINVDVTAGQKVPQALCLACTKKLMAAYCYVKQALVANELLMKHLKRVVPAVSATDCLLEAPMELCAEQHVKVKMETEDEEDVSANDVRIACSELTEPDEHDVENKKSVDPLTMIDSVKMETDPSSVDYAVEGEFITDVEDEDSLDNLPLFKRIEKWKEGRNTLFKCDDCPRKFKQSEYLKRHQTRFHKPETQWFACSLCVRKFSSSEALETHLKVHRNSKRSSNVSEHKKAKTVDLNLCKPHGYKLIECMICQSQYNKIADLRRHLEEHPDIVNLSLRPNMGANELAELFYPDSKHLDEDRLINLIQKDLAAGIYQRFYSITNQSGYEMDLDSSETESDLDGDPEDAYRRKKYRKPSYICELCQQKFPRKYLLYDHQRLSHSWSEAPHVCGRCDGRFVSLQLLRHHNESQCRNAQKRFLCHKCPLRFRWKHNLKAHFREHRITNQTFECPECKRVFDKKKSLTVHLLSVHAEESKLIPCQWCSRKFYRQDYLVKHLKRHGLKEQDIPLAETLIAATSRPNGAKRITCRMCNLHFERIVDLRAHIQLELKLSLSLHQSYDSPHNYSITNESGFELQLEDSETDDEIPSGSSNRPVYVCELCSVQCKRKFEMIQHQRTMHRFDKMPHECDGCIFKCVSKSIMDHHRLDQCNSSEKKHTCAKCSYKFMWPENLEQHLRLQHTNTASSDSPGVKRLSGPRDLDKEASEDGVPLLQCPHCDRTYQMKSRLNNHIRDVHVNGDRKRKEAVKRFLCSLCGMETQSAASLVTHMRRHTGEKPFKCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEKSYRQAKDLKLHLQQHTGECPFVCGTCGERFIQSSTLEKHRLMRRHFDEGEAWIRSQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00581676;
90% Identity: iTF_00580103; iTF_00566220; iTF_00477460; iTF_00488148; iTF_00539092; iTF_00476056; iTF_00550376; iTF_00546092; iTF_00615030; iTF_00504116;
80% Identity: -