Basic Information

Insect: Drosophila athabasca
Gene Symbol: lov
Assembly: GCA_008121215.1
Location: VMQQ01000019.1:4005852-4014989[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7.2e-19 1.5e-15 56.3 0.0 1 44 797 840 797 841 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7.2e-19	1.5e-15	56.3	0.0	1	44	797	840	797	841	0.96

Sequence Information

Coding Sequence: ATGTTAAAGGACGCCGAGGAGTTGATTAAACGCCGCAAACTGACGTCGCGCCACATGAACGACTTTGGACGCCAGGTGGCGACTTTACCGCTGCCCCTCCCATTGCTGGCCAAGACCCCGACCAGCGCCAGCGATCACGGCCCAATGCATTCCACACCCCCCACAACGCCTCCCACGCCGCCCCCCCTGCCCCTAAATATGACAACATGTCAAACGGCCACTGGAGCAGACCTGGCGACACACACAGCTCCAGCAGGCCATAGTCCACCGGCCACCCCCACTTCAGGCGGTGGGGCAGCCGGTGGAGCCGTCGTAGCAACTGCACCACAGGATCACTACAGTCTGCGCTGGAACAACCATCAGAATCACATCCTGAGGGCCTTCGATGCCCTGCTGCAGACTAAAACGCTGGTCGACGTGACATTGGTCTGTGCAGAGACCTCGATCCGGGCCCACAAAATGGTCCTGTCCGCCTGCTCCCCTTTCTTCCAGCGCGTGTTCGCCGAGACGCCCTGCAAGCACCCTGTGATTGTGCTCAAGGACTTCCGCGGCTGGGTGGTCCAGGCTATTGTGGACTTCATGTACCGCGGCGAGATCAGCGTGCCCCAGCAACGGCTCCAGACGCTGATCCAGGCTGGAGAATCGCTGCAAGTGCGGGGACTCGTCGAGAGCTCCGTTCCGGAGCACACACCCACGCCAGCCGCGTCGCCCGATGATTTTGGTCTGCTGGATGCATCGATGCTCTCCTCTAGCTTTGAGGAGGAGTCGCCATCGATGGTGCGAGCATCtcaggcaacgacagctggaAAACTGATAATGCCCTCCAGACAACACCTCTTTGGCAGCCCCGCGAGCTCGATGGCGGCGCTAAGTCTGCGTCGGAAGAGGGAGCAGGAGTGCGATCGCGATCGCGAGCTAGAGAGCGACCAGGAGCTAGGTGGGAGTTCACCGATGCCAAGACGCAAGCAAGCGCGGCCCCGCCGCCGGTCAGGCGATGTCCCGCACGACTTTGCCCTGAACAAGCCCGAGGCGGAAACACTGCAAACTGTGATCAAGCACGAGCTGCTcgagaggatggagcggggAGAGGAGGACGACGGATCAGCATCGGTTCAGGCCGAACAGGACTCCTTGCAGGCTTCAGAGGCGTCCGCAGAGCAGCCCAAGGAGAAGCACCCTAAGCCCGAAGACAGCGAGCAACCTCTGAATCTCAACGAGagccaccagcaccagcaggagctggaagaagaggaggaagaggaccaGGATCAGGATCAGGACGAAGACGAGGAAGAACAGGACATAGAAGAGCTTATACACACGACGAACGAGCTGAGGCGCCaggcggctgtggctgccgcTAATGCGGCCGCCATGTCGCCAatcccctccccctgccccagcGATGGGCCCGAGGACCTCTGCACCACTAAAAAAGACAAGGACATCAGCCACACCACCCACTCATCCGATTGTGAATcgaacaacaataacaataacaacaacaacagcagcaaactCCAGGACAACAACCAACGGATAATGCTTTCCCTAAAGGACATCAGACAGCTGAATGCCAATCCCAATTCCTCGTCCACGCCAATTCACACCCCCACCAGCTGCTCTGCGGGGGGCACCGGACTATTGAGTTTCCCGCCGCCTGGCATGAGACCGCCAGGACTTCCGGACAGCCCGCCCTGCCACATGGAGGCGCTGGAGGCTCAGATgcatgccgccgccgcagccgccgTGGCTGCTGCCGGTGCTGGTGAGCATCCCTTCCATCACATGGAGCACCAGATGGAGATGTCactggcggcggcagcagcggcagcagccatGCACCAACGAGACCCGCGAGATCCACGTGATCACAACGCTTTTGCCAACAGCATGTTGGGGCCCATGGGCATGTCCCCTTTCGGGGGACCTAACGGGGGGCCACCCGGCAGCAGTGGCGGCCCCGGAAGCGGATGTCCTGGACAGGCGCCCCATGAACGCCTGGAGGAGAGCATGAACCGCCTGAGCAAGGAACTTGGCAAGGAGTTTGGCAAAGACTTTGCCAAGGAGTTTGGTCCGTCCTCACCGATGAGTCTGCCCGGACACTTCAATCAGCAGGAGGGACATCCGCACACGCATCCGCCATCGCCGCTTCCTTTTCCCGGCATGTCCTCCGCGATGACGCTGACGCCGCCACACATGTTTGGCCTGGACTCCCCACTCGGCCTCTTTCCGCCCGGAATCGATCCCGGCAAGCTCTATAATCCGCTTATGGAGATGAGCGATCCACGGGACATGCCCGGCGGACCACCGCCGTTCCTCAAGAAGAAAAtGCCACGACCCAAGGGACAGCATTCGGCACCACGGGGCGGACCACCTCGTTCGTGGACCAACACAGAGCTAACGGAGGCCCTTCAGCACGTGTGGAACAAGAAGATGACCACCTCGCAGGCCTCACGCATCTTCGGCATACCATACAACTCTCTGCTGATGTATGTCCGGGGCAAGTACGGAAAGAGCTTGAAGCTGGAGCAGCTCCGCAAGGATTGCATCAGCGGGCCCCCTATTGAAATGCTCCAGATGGGCATCAGTGGGGGGAAcggaggcggcggcagctCCAGCAAGAGCGAGAAGAACAAGGACCGCAAGGAAAAGGACAAGGAGAAGGGTTCTACGAGCAACAACACCTCGGGTAGTtcgggcaatggcaatggcaatggtcCCCACAGCGGCTCGGCCAGTGGAAACGGTCCCCCCATGCCACATCCCAGTGACCTGGGTTCCTTGGGGCCACTTGATTTGGAGCTGGGACTGCCACTGGGTCCTCCTGGCGGGCCCCGAAGCGGCAGCTCGGAGCCTGATCTGTTGGGTGGTCCCAATGCCCTGTTCAATCCCTTCAATCCGCAGGGATTTTACCCAGACTTTTCTGCTGGCTTCCCGGGATTGCCATTGAGCATGCTGAATCTTCTGCCGCCGGCAGAACGACACCATGCAGCGGCTGCCATGCATCATCTGGGAGTGACAATGGATGAGGACTGCAAGTCGGTGGGCTCTAAGCAGTCCTCGTCCATGGACGACGACTTTGCGGGACAAGGAATGTCCCTCTCCCTATCACTGGAGCAACGGCGAGAGATGGCCGCCACGGGACCGCCCTTGACGCAACTGAAtggcggggcagggcaggattGA
Protein Sequence: MLKDAEELIKRRKLTSRHMNDFGRQVATLPLPLPLLAKTPTSASDHGPMHSTPPTTPPTPPPLPLNMTTCQTATGADLATHTAPAGHSPPATPTSGGGAAGGAVVATAPQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFGLLDASMLSSSFEEESPSMVRASQATTAGKLIMPSRQHLFGSPASSMAALSLRRKREQECDRDRELESDQELGGSSPMPRRKQARPRRRSGDVPHDFALNKPEAETLQTVIKHELLERMERGEEDDGSASVQAEQDSLQASEASAEQPKEKHPKPEDSEQPLNLNESHQHQQELEEEEEEDQDQDQDEDEEEQDIEELIHTTNELRRQAAVAAANAAAMSPIPSPCPSDGPEDLCTTKKDKDISHTTHSSDCESNNNNNNNNNSSKLQDNNQRIMLSLKDIRQLNANPNSSSTPIHTPTSCSAGGTGLLSFPPPGMRPPGLPDSPPCHMEALEAQMHAAAAAAVAAAGAGEHPFHHMEHQMEMSLAAAAAAAAMHQRDPRDPRDHNAFANSMLGPMGMSPFGGPNGGPPGSSGGPGSGCPGQAPHERLEESMNRLSKELGKEFGKDFAKEFGPSSPMSLPGHFNQQEGHPHTHPPSPLPFPGMSSAMTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGISGGNGGGGSSSKSEKNKDRKEKDKEKGSTSNNTSGSSGNGNGNGPHSGSASGNGPPMPHPSDLGSLGPLDLELGLPLGPPGGPRSGSSEPDLLGGPNALFNPFNPQGFYPDFSAGFPGLPLSMLNLLPPAERHHAAAAMHHLGVTMDEDCKSVGSKQSSSMDDDFAGQGMSLSLSLEQRREMAATGPPLTQLNGGAGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00605660;
90% Identity: iTF_00480944; iTF_00517799; iTF_00517634; iTF_00611435; iTF_00611275; iTF_00473869; iTF_00473704; iTF_00603438; iTF_00603269; iTF_00484368; iTF_00484522; iTF_00563824; iTF_00564008; iTF_00601142; iTF_00600978; iTF_00487384; iTF_00487221; iTF_00471706; iTF_00471537; iTF_00474428; iTF_00474584; iTF_00514813; iTF_00514977;
80% Identity: iTF_00480944;