Basic Information

Insect: Drosophila helvetica
Gene Symbol: lov
Assembly: GCA_963969585.1
Location: OZ018404.1:23295977-23304828[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.1e-18 2.5e-15 56.3 0.0 1 44 794 837 794 838 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.1e-18	2.5e-15	56.3	0.0	1	44	794	837	794	838	0.96

Sequence Information

Coding Sequence: ATGTTAAAGGACGCCGAGGAGTTGATTAAACGCCGCAAACTGACGTCGCGCCACATGAACGACTTTGGACGCCAGGTGGCGACTTTACCGCTGCCCCTTCCATTGCTGGCCAAGACCCCGACGAGCGATCACGGCCCCATGCACTCCACACCCCCCACAACGCCGCCAACGCCGCCCCCCCTGCCGCTAAACATGAGTCAAACGGCCAATGGAGCAGACATGGCGGCACACACAGCTCCAGCAGGCCATAGTCCACCGGCCACCCCCACTACAGGCGGTGGGGCAGTCGGTGGAGCCGTCGTAGCAACGGCACCACAGGATCACTACAGTCTGCGCTGGAACAACCATCAGAATCACATCCTGAGGGCCTTCGATGCCCTGCTGCAGACTAAAACGCTGGTCGACGTGACATTGGTCTGTGCAGAGACCTCGATCCGGGCCCACAAAATGGTCCTGTCCGCCTGTTCCCCTTTCTTCCAGCGCGTGTTCGCCGAGACGCCCTGCAAGCACCCAGTGATTGTGCTCAAGGACTTCCGCGGCTGGGTGGTCCAGGCTATTGTGGACTTCATGTACCGCGGCGAGATCAGCGTGCCCCAGCAACGGCTCCAGACACTGATCCAAGCTGGAGAATCGCTGCAAGTGCGGGGACTCGTTGAGAGCTCCGTTCCGGAGCACACACCCACGCCAGCCGCGTCGCCCGATGATTTCGGTCTTCTGGATGCATCGATGCTCTCCTCCAGCTTTGAGGATGAGTCGCCATCGATGGTGCGAGCATCTCAGACAGCGACAGGTGGAAAACTGATAATGCCCTCCAGACAACACCTCTTTGGCAACCCCGCGAGCTCGATGGCGGCGCTAAGTCTCCGTCGGAAGAAGGAGCAGGAGTGCGATCGCGAGCTGGAGAGCGACCAGGAGCTGGGTGGGAGTTCACCGATGCCAAGACGCAAGCAAGCGCGACCCCGCCGCCGGTCAGGTGATGTCCCGCACGACTTTGCCCTGAACAAGCCCGAGGCGGAAACACTGCAAACTGTGATCAAGCACGAGCTACTCGAGAGAATGGAGCGGGGAGAGGAGGACGACGGACCAGCATCAGTTCAGGCCCAACAGGACTCCTCAGAGGCTTCAGAGGCGTCCGCAGAGCAGCCGAAGGAGAAGCAGCCCAAGCCCGAAGACAGTGAGCAACCTCTGAATCTCAACGAAAGccaccagcatcagcaggagctggaggaagaggaggaagaTGACCAGGATCAGGATCAGGACGAAGAAGATGAAGAACAGGACATAGAAGAACTTATACACACGACGAACGAGCTGAGGCGCCAGGCGGCAGTGGCTGCCGCTAATGCGGCCGCCATGTCGCCAatcccctccccctgccccagcGATGGGCCCGAGGACCTCTGCACCACTAAGAAGGACAAGGACATCAGCCACACCAATGTCCACCACACCACCCACTCATCCGATTGTGAATcgaacaacaataacaacaacaatagcagcaAACTGCAAGACAACAACCAACGGATCATGCTTTCCCTAAAGGACATCAGACAGCTGAATGCCAATCCCAATGCCTCGTCCACGCCAATCCACACGCCCACCAGCTGCTCCGCGGGGGGCAACGGACTATTGAGCTTTCCTCCGCCTGGCATGCGCCCGCCAGGACTTCCGGACAGCCCGCCCTGCCACATGGAGGCACTGGAGGCCCAGATGcacgccgccgccgcagccgccgtAGCTGCTGCCGGGGCTGGGGAGCATCCCTTCCATCACATGGAGCACCAGATGGAGATGTCTCTGGCGGCGGCAGCTGCGGCAGCTGCCATGCACCAACGAGACCCGCGAGATCCGCGCGATCACAACGCTTTTGCCAACAGCATGTTAGGACCCATGGGCATGTCACCCTTCGGGGGACCCAATGGGGGGCCACCCTGCAGCAGTGGTGGCCCCGGAAGCGGATGTCCTGGACAGGCGCCCCATGAACGGCTGGAGGAGAGCATGAACCGCCTGAGCAAAGAACTTGGCAAGGAGTTTGGCAAAGACTTTGCCAAGGAGTTTGGCCCGTCCTCGCCGATGAGTCTGCCCGGACACTTCAATCAGCAGGATGGACATCCGCACACGCATCCGCCATCGCCGCTGCCCTTTCCCGGCATGTCCTCCGCGATGACGCTGACGCCGCCGCACATGTTTGGCCTGGACTCCCCACTCGGCCTCTTTCCACCCGGAATCGATCCCGGCAAACTCTATAATCCGCTCATGGAGATGAGCGATCCACGGGACATGCCCGGCGGACCACCGCCGTTCCTCAAGAAGAAAATGCCACGACCCAAGGGACAGCACTCGGCACCACGGGGCGGACCACCTCGTTCGTGGACCAACACAGAGCTGACGGAGGCCCTTCAGCACGTGTGGAACAAGAAGATGACCACCTCGCAGGCCTCACGCATTTTTGGCATACCGTACAACTCCCTGCTGATGTATGTCCGGGGCAAGTACGGAAAGAGCTTGAAGCTGGAGCAGCTCCGCAAGGATTGCATCAGCGGGCCCCCTATTGAGATGCTCCAGATGGGCATCAGTGGGGGGAACGGAGGCGGTGGCAGCTCCAGCAAGAGCGAGAAGAACAAGGACCGCAAGGAAAAGGACAAGGAGAAGGGCTCTGCGAGCAACAACACCTCGGGCAGTTcgggcaatggcaatggcaatggttCCCACAGCGGCTCGGCCAGTGGAAACGGTCCCCCCATGCCGCATCCCAGTGATCTGGGTTCCTTGGggccactcgatttggagcTGGGACTGCCACTGGGTCCTCCGGGCGGGCCCCGAAGCGGCAGCTCGGAGCCTGATCTGCTGGGTGGACCCAATGCCCTGTTCAATCCCTTCAATCCGCAGGGATTTTACCCAGACTTTTCCGCTGGCTTCCCGGGACTGCCATTGAGCATGTTGAATCTTCTGCCGCCGGCAGAACGGCATCATGCAGCGGCTGCCATGCACCATCTGGGAGTGACAATGGACGAGGACTGCAAGTCGGTGGGCTCCAAGCAGTCCTCCTCCATGGACGACGACTTTGCGGGACAAGGAATGTCCCTCTCAATGGAGCAACGGCGTGAGATGGCCGCCACGGGACCGCCCTTGACGCAACTGAAtggcggggcagggcaggattGA
Protein Sequence: MLKDAEELIKRRKLTSRHMNDFGRQVATLPLPLPLLAKTPTSDHGPMHSTPPTTPPTPPPLPLNMSQTANGADMAAHTAPAGHSPPATPTTGGGAVGGAVVATAPQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFGLLDASMLSSSFEDESPSMVRASQTATGGKLIMPSRQHLFGNPASSMAALSLRRKKEQECDRELESDQELGGSSPMPRRKQARPRRRSGDVPHDFALNKPEAETLQTVIKHELLERMERGEEDDGPASVQAQQDSSEASEASAEQPKEKQPKPEDSEQPLNLNESHQHQQELEEEEEDDQDQDQDEEDEEQDIEELIHTTNELRRQAAVAAANAAAMSPIPSPCPSDGPEDLCTTKKDKDISHTNVHHTTHSSDCESNNNNNNNSSKLQDNNQRIMLSLKDIRQLNANPNASSTPIHTPTSCSAGGNGLLSFPPPGMRPPGLPDSPPCHMEALEAQMHAAAAAAVAAAGAGEHPFHHMEHQMEMSLAAAAAAAAMHQRDPRDPRDHNAFANSMLGPMGMSPFGGPNGGPPCSSGGPGSGCPGQAPHERLEESMNRLSKELGKEFGKDFAKEFGPSSPMSLPGHFNQQDGHPHTHPPSPLPFPGMSSAMTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGISGGNGGGGSSSKSEKNKDRKEKDKEKGSASNNTSGSSGNGNGNGSHSGSASGNGPPMPHPSDLGSLGPLDLELGLPLGPPGGPRSGSSEPDLLGGPNALFNPFNPQGFYPDFSAGFPGLPLSMLNLLPPAERHHAAAAMHHLGVTMDEDCKSVGSKQSSSMDDDFAGQGMSLSMEQRREMAATGPPLTQLNGGAGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00605660;
90% Identity: iTF_00480786;
80% Identity: iTF_00517799;