Basic Information

Insect: Drosophila affinis
Gene Symbol: lov
Assembly: GCA_037356375.1
Location: CM074799.1:23656229-23665228[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1e-18 2.3e-15 56.3 0.0 1 44 793 836 793 837 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1e-18	2.3e-15	56.3	0.0	1	44	793	836	793	837	0.96

Sequence Information

Coding Sequence: ATGTTAAAGGACGCCGAGGAGTTGATTAAACGCCGCAAACTGACGTCGCGCCACATGAACGACTTTGGACGCCAGGTGGCGACATTACCGCTGCCCCTCCCATTGCTGGCCAAGACCCCGACCAGCGCCAGCGATCACGGCCCAATGCATTCCACACCCCCCACAACGCCGCCCAcgccccccctgccccttaACATGACAACATGTCAAACGGCCACTGGAGCAGACCTAGCGACACACACAGCTCCAGCAGGCCATAGTCCACCGGCCACCCCCACTTCAGGCGGAGGGGCAGCCGGTGGAGCCGTCGTAGCAACTGCACCACAGGATCACTACAGTCTGCGCTGGAACAACCATCAGAATCACATCCTGAGGGCATTCGATGCCCTGCTGCAGACTAAAACGCTGGTCGACGTGACATTGGTCTGTGCAGAGACCTCGATTCGGGCCCACAAAATGGTCCTGTCCGCCTGCTCCCCCTTCTTCCAGCGCGTGTTCGCCGAGACGCCCTGCAAGCACCCTGTGATTGTGCTCAAGGACTTCCGCGGCTGGGTGGTCCAGGCTATTGTGGACTTCATGTACCGCGGCGAGATCAGCGTGCCTCAGCGACGGCTCCAGACGCTGATCCAGGCTGGAGAATCGCTGCAAGTGCGGGGACTCGTCGAGAGCTCCGTTCCGGAGCACACACCCACGCCAGCCGCGTCGCCCGATGATTTTGGTCTGCTGGATGCATCGATGCTCTCCTCCAGCTTTGAGGAGGAGTCGCCATCGACGGTGCGAGCATCtcaggcaacgacagctggaAAACTGATAATGCCCTCCAGACAACACCTCTTTGGCAGCCCCGCGAGCTCGATGGCGGCGCTAAGTCTGCGTCGAAAGAGGGAGCAGGAGTGCGATCGCGATCGCGAGCTAGAGAGCGACCAGGAGCTAGGTGGGAGTTCACCGATGCCAAGACGCAAGCAAGCGCGCCCCCGCCGCCGGTCAGGCGATGTCCCACACGACTTTGCTCTGAACAAGCCCGAGGCGGAAACACTGCAAACTGTGATCAAGCACGAGCTGCTCGAGAGGATGGAGCGGGGAGAGGAGGACGACGGATCAGCATCGGTTCAGGCCCAACAGGACTCCTCACAGGCTTCAGAGGCGTCCGTAGAGCAGCCCAAGGAGAAGCACCCCAAGCCCGAAGACAGTGAGCAGCCTCTGAACCTCAACGAAAGCCACCAGCACCATCAGGAGCtggaagaagaggaggaggaggaccagGATCAGGACGAAGACGAGGAAGAACAGGATATAGAAGAGCTTATACACACGACGAACGAGCTGAGGCGAcaggctgctgtggctgccgctAATGCGGCCGCCATGTCGCCaatcccctccccctgccccagcGATGGGCCCGAGGACCTCTGCACCACTAAAAAAGACAAGGACATCAGCCACACCACCCACTCATCCGATTGTGAatcgaacaacaacaacaataacaacaacaatagcagcaAACTCCAGGACAACAACCAACGGATAATGCTTTCCCTAAAGGACATCAGACAGCTGAATGCCAATCCCAATTCCTCGTCCACGCCAATTCACACCCCCACCAGCTGCTCTGCGGGGGGCAACGGACTATTGAGTTTCCCTCCGCCTGGCATGAGACCGCCAGGACTTCCGGACAGCCCGCCCTGCCACATGGAGGCGCTGGAGGCTCAGATGCatgccgctgccgcagccgccgTGGCTGCTGCCGGGGCTGGTGAGCATCCCTTCCATCACATGGAGCACCAGATGGAGATGTCCctggcggcggcagctgcGGCAGCAGCCATGCACCAACGAGACCCGCGAGATCCACGTGATCACAACGCTTTTGCTAACAGCATGTTGGGGCCCATGGGCATGTCCCCTTTCGGCGGACCCAACGGGGGACCACCCGGCAGCAGCGGCCCCGGAAGCGGATGTCCTGGACAGGCGCCCCATGAACGGCTGGAGGAGAGCATGAACCGCCTGAGCAAGGAACTTGGCAAGGAGTTTGGCAAAGACTTTGCCAAGGAGTTTGGTCCGTCCTCACCCATGAGTCTGCCCGGACACTTCAATCAGCAGGAGGGACATCCGCACACGCATCCGCCATCGCCGCTTCCTTTTCCCGGCATGTCCTCCGCGATGACGCTGACGCCGCCGCACATGTTTGGCCTGGACTCCCCACTCGGCCTCTTTCCGCCCGGAATCGATCCCGGCAAGCTCTATAATCCGCTTATGGAGATGAGCGATCCACGGGACATGCCCGGCGGACCACCGCCGTTCCTCAAGAAGAAAAtGCCACGACCCAAGGGACAGCATTCGGCACCACGGGGCGGACCACCTCGTTCGTGGACCAACACAGAGCTAACGGAGGCCCTTCAGCACGTGTGGAACAAGAAGATGACCACCTCGCAGGCCTCACGCATCTTTGGCATACCATACAACTCTCTGCTGATGTATGTCCGGGGCAAGTACGGAAAGAGCTTGAAGCTGGAGCAGCTCCGCAAGGATTGCATCAGCGGGCCCCCTATTGAAATGCTCCAGATGGGCATCAGTGGGGGGAacggaggcggcggcagctCCAGCAAGAGCGAGAAGAACAAGGACCGCAAGGAAAAGGACAAGGAAAAGAGTTCTACGAGCAACAACACCTCGGGTAGTTcgggcaacggcaatggcaatggtcCCCACAGCGGCTCGGCCAGTGGAAACGGTCCCTCCATGCCGCATCCCAGTGACCTGGGTTCCTTGGGGCCACTGGACTTGGAGCTGGGACTGCCACTGGGTCCTCCTGGCGGGCCCCGAAGCGGCAGCTCGGAGCCTGATCTGTTGGGTGGTCCCAATGCCCTGTTCAATCCGTTCAATCCGCAGGGATTTTACCCAGACTTTTCTGCTGGCTTCCCGGGATTGCCATTGAGCATGCTGAATCTTCTGCCGCCGGCAGAACGACACCATGCAGCGGCTGCCATGCATCATCTGGGAGTGACAATGGACGAGGACTGCAAGTCGGTGGGCTCTAAGCAGTCCTCGTCCATGGACGACGACTTTGCGGGACAAGGAatgtccctctccctctcactggaGCAACGGCGAGAGATGGCCGCCACGGGACCGCCCTTGACGCAACTGAatggcggggcagggcaggattGA
Protein Sequence: MLKDAEELIKRRKLTSRHMNDFGRQVATLPLPLPLLAKTPTSASDHGPMHSTPPTTPPTPPLPLNMTTCQTATGADLATHTAPAGHSPPATPTSGGGAAGGAVVATAPQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQRRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFGLLDASMLSSSFEEESPSTVRASQATTAGKLIMPSRQHLFGSPASSMAALSLRRKREQECDRDRELESDQELGGSSPMPRRKQARPRRRSGDVPHDFALNKPEAETLQTVIKHELLERMERGEEDDGSASVQAQQDSSQASEASVEQPKEKHPKPEDSEQPLNLNESHQHHQELEEEEEEDQDQDEDEEEQDIEELIHTTNELRRQAAVAAANAAAMSPIPSPCPSDGPEDLCTTKKDKDISHTTHSSDCESNNNNNNNNNSSKLQDNNQRIMLSLKDIRQLNANPNSSSTPIHTPTSCSAGGNGLLSFPPPGMRPPGLPDSPPCHMEALEAQMHAAAAAAVAAAGAGEHPFHHMEHQMEMSLAAAAAAAAMHQRDPRDPRDHNAFANSMLGPMGMSPFGGPNGGPPGSSGPGSGCPGQAPHERLEESMNRLSKELGKEFGKDFAKEFGPSSPMSLPGHFNQQEGHPHTHPPSPLPFPGMSSAMTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGISGGNGGGGSSSKSEKNKDRKEKDKEKSSTSNNTSGSSGNGNGNGPHSGSASGNGPSMPHPSDLGSLGPLDLELGLPLGPPGGPRSGSSEPDLLGGPNALFNPFNPQGFYPDFSAGFPGLPLSMLNLLPPAERHHAAAAMHHLGVTMDEDCKSVGSKQSSSMDDDFAGQGMSLSLSLEQRREMAATGPPLTQLNGGAGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00605660;
90% Identity: iTF_00480786;
80% Identity: iTF_00471706;