Danc013323.1
Basic Information
- Insect
- Drosophila anceps
- Gene Symbol
- lrrfip2
- Assembly
- GCA_035045945.1
- Location
- JAWNON010000199.1:234630-242993[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-114 1.4e-110 369.3 25.1 1 299 30 321 30 322 0.98 2 2 0.018 1.6e+02 1.4 0.8 208 239 339 369 324 372 0.78
Sequence Information
- Coding Sequence
- ATGGACAGTACTAACGCCACCGGTCGGCGGCGAAACAATATGTGCGTTAATGCCGAGGATAACGCGCTTGatcaaataacaaaagagGCCGAAGCTCGTTTAGCAGCGCGACGTCTAGCCCGCGCTGAAGCCCGGGAGATTCGTATGCGTGAACTAGAGCGACAGCAAAAGGAATTGGAACAAAACGCAGACCGTGCATTTGATATGCAAAGCACGAGTGGAAACGTCATAACCGACTCACTCTCAGCTCATTTAGTACGCCACGCTTATAGCGGTGTTATTAACTTGGCGCGTGCTACTGCTTCGCGACGCAGCAGTGAGGATTCGTTGGAGGATGAATGTCGTAGCTTGCGTGATATTAAACACGagcttaaagaAGTCGAAGAGCGTTTTCGAAAAGCGATGATAACGAATGCTCAATTAGACAATGATCGTTCATCTCAGACCTTTGAAGTTAAGCTACTTAAAGATAAAAGTGAAACAATGCAAGAATCTCTTGCTCAATTGCAACGcgaatttaaaaacaaacttcgAGATTGTAGTGCCCTTAAACGAGACTTAGACCGCACAACACTTGAATTAAACTTGGTGCAAGGTCAGCTCAGTGAGCGTGATACATTAATAGAAGAATATggtcttgttattgttgctattgaaaATAGTGATGGTAGTGATGCGAAGCGCGCTCTAGTGAGCGTTGAAAATGCCAATATTTTAGCAACTGTGCAGGGTTCTCTTGaCGTAAGAATTAAAAAGTTTGCAGAGGAAAAACAGCGACTTCTTAATGAAATGCATAAGTTACGTCAGCAGCTAGATGCTTTCAAAAGTGAAGGCAGACCAGGCCGAGGAAGTTTACTAAGTGACTCTTTAGGGCCCGATGATGACTATGATGCTCAGAGAGagtcaaataaaatcatatccgattataaatataagctaCATAAAGCTGAACAGGTAATCGCAAGTCTTCAAGCAAACTTAGCGCGCTCAGAGACTCAAGTAATACGTTATAAAAGTACAGCTGAAGCTGCAGAAAAATCGGAGGCTGAACTGAAAGTAGAAAGACGTAAGCTTCAACGTGAGCGGGGAGAATTGCTCGTGGAGGTGATCAGCAAAGGCTTCGGCCTGCGCTTCGTCTCCGGTAAGCCACCCACTCGTAGCGCTCAGGATGGGGTGACGACGTAA
- Protein Sequence
- MDSTNATGRRRNNMCVNAEDNALDQITKEAEARLAARRLARAEAREIRMRELERQQKELEQNADRAFDMQSTSGNVITDSLSAHLVRHAYSGVINLARATASRRSSEDSLEDECRSLRDIKHELKEVEERFRKAMITNAQLDNDRSSQTFEVKLLKDKSETMQESLAQLQREFKNKLRDCSALKRDLDRTTLELNLVQGQLSERDTLIEEYGLVIVAIENSDGSDAKRALVSVENANILATVQGSLDVRIKKFAEEKQRLLNEMHKLRQQLDAFKSEGRPGRGSLLSDSLGPDDDYDAQRESNKIISDYKYKLHKAEQVIASLQANLARSETQVIRYKSTAEAAEKSEAELKVERRKLQRERGELLVEVISKGFGLRFVSGKPPTRSAQDGVTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00336724;
- 90% Identity
- iTF_00519914;
- 80% Identity
- -