Basic Information

Gene Symbol
Arid2
Assembly
GCA_035045945.1
Location
JAWNON010000054.1:364848-370356[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-24 4.8e-21 75.0 0.0 2 89 83 169 82 169 0.93

Sequence Information

Coding Sequence
ATGACGTCCATTGATAGTGTACGCGTGCTGCTTCAGTCTCTGCCAGCAGcatcgcctgctgctgccaacaacaacacacagcaAAATGAATCGACGCCGGCAAAACTTGGCGCTGCGGGAGCACCATTTCGCGCGAGAAAtacccagcaacaacagctacaagcACAACAGCAATTAATTTTCGGAACGCCAGAAAAACCACAAGCTGGAGATGCGCCTGGAACTGAAGACCAGCAGCTAAGTGCTCCGGACGAGTTTTGGCGTGATTTGCATCAGTTTCATGAGCGGCGCGGCACCCCTCTGACACAAGCGGCTAAGATTAGTGGCCAACATGTGGATTTGTATCGGCTATATCAGGAGGTCACGGAACGCGGTGGCTTTAATAAGGTCAACATGCGCGACGAGTGGGACGACGTGTACAGCGCGCTGGACACGCTGCGGGATCGTTGCGTTAATGGCACCGCAGGCATAAAGCATATCTATCGTCGCTATCTGGATAAATACGAGCGCCTAAACTTTTTGGGCGAGGATCCAGACAAGCTGGAAGCCTTGGAGGCGGCCATCGAATGTGTTGAGCTGGGCGCCAGCGCCAGTCGTGTGCGTTCTCGTGCATTAGCCGGCGGTGCCGTTGGCGGTGCAGGTGGCAGTTTGACGGGCAGTGGCTTGGGAAGCATTTTTGGCATGCCACACTCCACTTTGACGGCCGTGCCTATGGCGTACAATCAGCGCCAGCATATGGTAAATGCGGATCGCCGTCGTCAGTACAAAATGTCAACTCAGCTGCACAAGCACAGCAGCTAtgagaagctgctgctgtctcttATATCGCCGCTGCCCAACGAACAGGATTTTGCCATCAATGTGTGCACACTGATGGCGAACGAGCCGCGTTCCACTCTGCAACTGACTGAGTGCCCCAAGCTGCTGGATGTGCTGCTCGCCCATTTGGGCGTCTATGCGGATTACAGCATGCGTCAGCTGTTTCAGCATGGCCACAACAATACGGGCATGTTGGTGCGAAGGCATTCGAAACTTAATTTTTGGCGGGATCTGCTGTACGATAAGCCACAGATTCTGGACTTGTATACGGATGAACAAGCCTGGTTGGACAATGGTCTGATTAGCAAGGAGACTGATACCTCCGATGACTATCTGTTCCAATCCGATGAACTCGATTTCGAACTGGACTTTTTGAATCTGCGCCGCAGTCATGGCACGGACGAACGCATTGGCCAGCGTGTACTACAAATTGTGCAGCTATTGAGAAGCTTGAGCTTCCATCAGGAGAACGTCTCGCTGCTTGCCTCCAATCGTACGCTCTGGCGATATTTGGTCATGGGCGCCAATGTTCGTTGGAGCAACATTCACATTCAGGCTTTGGAAACGGCTGGGAATCTGGCACACCAGTTTGAGCTACTCGACCCGGCCACGGACGAGCTATCGCGGAATTTGCTGGCCACTTTGTGCGAGGGCGTCGAATCGAATGATCGTGCCGTGATAATCAGCTGCCTGGAGATACTATACAAGCTGTGCGGACGCGAGGGCAATGCCCAGCACATAAATCGTTGCCTCGGCTTGGATTTCTATCAGCGtgctatgctgctgctgtcgctgacAGATGTGATGCTGCTTATCTTTACCCTGGAGGCGATTTACGCGTTGAGCACGTTAGGTGCACGTCCATGTTCCATGCTGATGCAGGTACGTGGTCTGCTCGACCAGTTGGTGGCTTTGTTAACTGTTGAGGCGCAATCGTACGGCGCTGCTGGCTGCATACTGATGCGAGTTGTTGAAGTGGTGCCGGGTAACATATTGTCTACATTGTCACAAACTATGCCCAGCAATCAGATGACGCCATTGATGACGGTTAAGCagtcgcagccacagccacagctgcagccgcaggtGCAGCAGCCAGTTGTGTCACTGCCTCTACCAGCACCAACACAGGTACATGTGCTGCCACCACAGCCGGAGATCGTTTCGCATCCTgtggctgctcctgctcctacTAGTGTAATTGCTCCTGCTACTGTAATTGCTTCTGCTCCTGTTGCCATACCTGCGCctgtgccactgccactgccactgcccaTGCCAGTGCCAAGCTTGCCCCAAGTGCAGCTGCCAGTGCCTAGTTTGCCGCAGGTGCAGCTTCCGCCACCGCCTAGCCTACAAGTACCAGCTCCACCTGCTTCAGCATCAGTGGCTGCCACTACAGTTACGCTGCCCGCGGCGCCATCAGCGCCGCAAAGTTTCACCCATGACGACGAGACCTATGCCCTGGCCTGGCTGGGCGCCACTTACGAGCGAGCCGGTAACGGTCACGAGTATCGCGTCGAGCAACAGGAGCTGTACACCATTTACCTATCGCATTGCCAGAAGGCGGGTAAACATTCGGTGGTCAACCGTTTGCAATTTCCGCGTCTCGTGCGACTCATCTTCAATGCAACCGTAGGACCCGCCATTGTACGACAGATGGATGGAACAGAACTTCCCGGAACGCACTATGTCGGCATAAGGATGCGCGCCCAACCATTGcccatgcagcagcagcaacagcagcagcagcaacagaaagcaacagcaataccTACCGCAATAGTAGCTAAAAAAGAAGCAACGCTAACGCCAAAATCGGACACAACAACTGGCGAAGCGATCGAGGACGCCCACGTCTCGCCCACGCCCAGCTCTTCGCTGATTAAGAGCCTGCTGGCAAACAAGGTTAACGAGCGACAGTTGAAACAAAAGGCGCAGGCGCAGCCGCCCGCTCTTGTGGCCaccacagcatcagcaactgGCTCTTCAGCCGGCCAGCCCATCAAAGTCACCTCCACGGCAATTAGCGCATTTGTGAATAATCCGTTGATGCAGCACACGCCCGTGAAGGTGGGTCAAACCACCATAAAGCCGTTGCATCCGCAGCTGCCCATGGAGAAGAAGCCAATGACAGAATCGGCGCCACCGCCGCTCGCCCCGCTTAGTGGCTCCAATGTGCTAACGAAGGATGCGCAAGGCCGTACCGTAATTATACAATCTAAACGAAAGCTTACCATCGATGACGAGCAAAATAAGCGGTTGGCAATGGAGAGCACTAATGCAGCCACTGGCAAGGATGAACCGCAGGTGACGCCCTCAAAGAATGCGGCCAATCTCTATGCAGATTTGGCTGCCTCTATACTGGAGGATGAGGATTTGGATGATGTGCCGCCGTTGGCAGCGTCCAgtcaacaagagcaacaaccaacgccccagcagcagcagcaacaacaacaacaacagcagcagcagcagcagcagcagcaacatcagcaacagcaacaacaattgcaactaaTATCTGCTAAGGTGCACTCGACACAGCGGCAGCTTATCTTTCCCACTGGCAACTCGCCGGCGCCACCGCCGCAGTTGAAATTGGCCACAACGGCCACCATCAAAACAGACCAGGGCCTACAAACGGTGCCGGTTATATTGCAGCAGAagacagagcagcagcagcagcagcagccaacccAAACACAGTACGTGCTGGCCACCAATCAGCAGGGGCAGACCTATTTGGTGGCACAACAATCGGCGCCAGTGGCAGCGTCGCCGAGTGCGGCTGGCGCGCCCACTCTGCTGGTCACTCaagcgccgcagcagcagacaaagaCGATAATCATATTGCAGCAGCCGCCGGGAGTGAGCGCCAGCAATGCGCCTGGCACGCAGAAAGTCATCATGACGACAGCGCAGGGGCAACAGGTGCTGGTGACAACCACCACAGGGCCTGCGGCAGCGGTGCGTCCTGCTACCCaagtccagcagcagcagcaacagcaacaaatctTTATAAATCCCCAACGTGCAGTGTCCGCCGCGTTGGGTGCGGGTCAAATGTCGCCGTCGCTGCTTTCACAGCTTAATCAAATACCTGCAACCATAAAGCTGCATCAGCCGCAGCCGGCGCAAACCGCGCAGTTGCATCGCGGCGGCATAGTTGCCACCAAAGCAGCGCCCATACCTCAGCTACAGCAACATCAGTCCATTATACAGCAGCATATCATCTCGAGTCCTGCAGCTGGCGCGGacaagcggcagctgctgctgggcggcATTAAGGAAACAACGCTCATCACCCAAACGCCCGCAACGGCTGCTCCCTTGCAGCAGAGTCAACTCAATTCGCAGACAATCATAACCACTCAACCACCGGTGGGGACCACCTCAGTGGTGGGCgctgcactgcagcagcaacagcaacacatacgcacagtattggagcaacagcagcagcatcatcccTCCATAATACAGCAAAAGATTACGATGCCAATGGCGCTCACGGAGGCGGCCAAAGTGAAGCCTGCGACAGCAATACCCATTGCCAAGAAGCCAATGCCACCGCCCACGCCATGCGCATCGCCAGCACAGCAGCATTCGGTGCAAATGCCTGTGCTGAAGCCCACTCAACAAGGGCAGGTGGTCAGCGGCGAATCAAAGCCGACAATAATCGCTGAATCAAAGCCAGCAGAGCAGCCAGCTGTCACAGCAGTAACAGTTGCCAACAATCCATCagtggcggcaacagcagctgccacagcaacaacaacaacgggcgCCACGAGTAGTGTAACCAATGCCAATCCCTCAGCTGCTACAGCTGTGAGCGCTGTACCCGTGGACGTGAATTGGTTGTTTATTTGCGATTGGCGTAATTGTCCGCGCCGGAAGTTCAAGTCGCTCAACGAACTGCAACATCACGTCTGCAATGTACACTGTCCGGATCATTTGGACTCGGGCGCTGAGATCTATTGCCAGTGGGGCAGCGGTCCCAGCCTGTGCGACAATATTGCTCGCAAGCGTTACTCGCTGATGACGCATCTCGTCGATCGTCATTTGGCGCTGGATGACCTGAGAGCCAGCGTGCAACGACGCCTTGCCACTGGCATACACAATGTTGCGCCCGCTCAGCCAACGGTTACAATAGTGCGCAATGTGAGCAATGCCAATGCGTcggcaacggcgacagcagctgctggggCTACTGCAGCCACTGCTGTGGGAACTTCTGCTCTGCAGGCAATCAAACGGCACTCGGCTGACTTTCTGAACTCGAAGGAACTGATGGACGAGAACGAGGGCCCAGTCACAAAGAGCATACGGCTCACGGCTGCGCTGATATTGCGGAATCTGGTCAATTACTCAGTGACGGCCAAGCGGAGTTTGAAGCGTTACGAGCCGCATCTGGCCAATGTGGCCTTTAGCAATGTGGAGGCCAGTGGCGTGCTATCCCACATACTACACGAGCTGAGCCAGTAA
Protein Sequence
MTSIDSVRVLLQSLPAASPAAANNNTQQNESTPAKLGAAGAPFRARNTQQQQLQAQQQLIFGTPEKPQAGDAPGTEDQQLSAPDEFWRDLHQFHERRGTPLTQAAKISGQHVDLYRLYQEVTERGGFNKVNMRDEWDDVYSALDTLRDRCVNGTAGIKHIYRRYLDKYERLNFLGEDPDKLEALEAAIECVELGASASRVRSRALAGGAVGGAGGSLTGSGLGSIFGMPHSTLTAVPMAYNQRQHMVNADRRRQYKMSTQLHKHSSYEKLLLSLISPLPNEQDFAINVCTLMANEPRSTLQLTECPKLLDVLLAHLGVYADYSMRQLFQHGHNNTGMLVRRHSKLNFWRDLLYDKPQILDLYTDEQAWLDNGLISKETDTSDDYLFQSDELDFELDFLNLRRSHGTDERIGQRVLQIVQLLRSLSFHQENVSLLASNRTLWRYLVMGANVRWSNIHIQALETAGNLAHQFELLDPATDELSRNLLATLCEGVESNDRAVIISCLEILYKLCGREGNAQHINRCLGLDFYQRAMLLLSLTDVMLLIFTLEAIYALSTLGARPCSMLMQVRGLLDQLVALLTVEAQSYGAAGCILMRVVEVVPGNILSTLSQTMPSNQMTPLMTVKQSQPQPQLQPQVQQPVVSLPLPAPTQVHVLPPQPEIVSHPVAAPAPTSVIAPATVIASAPVAIPAPVPLPLPLPMPVPSLPQVQLPVPSLPQVQLPPPPSLQVPAPPASASVAATTVTLPAAPSAPQSFTHDDETYALAWLGATYERAGNGHEYRVEQQELYTIYLSHCQKAGKHSVVNRLQFPRLVRLIFNATVGPAIVRQMDGTELPGTHYVGIRMRAQPLPMQQQQQQQQQQKATAIPTAIVAKKEATLTPKSDTTTGEAIEDAHVSPTPSSSLIKSLLANKVNERQLKQKAQAQPPALVATTASATGSSAGQPIKVTSTAISAFVNNPLMQHTPVKVGQTTIKPLHPQLPMEKKPMTESAPPPLAPLSGSNVLTKDAQGRTVIIQSKRKLTIDDEQNKRLAMESTNAATGKDEPQVTPSKNAANLYADLAASILEDEDLDDVPPLAASSQQEQQPTPQQQQQQQQQQQQQQQQQQHQQQQQQLQLISAKVHSTQRQLIFPTGNSPAPPPQLKLATTATIKTDQGLQTVPVILQQKTEQQQQQQPTQTQYVLATNQQGQTYLVAQQSAPVAASPSAAGAPTLLVTQAPQQQTKTIIILQQPPGVSASNAPGTQKVIMTTAQGQQVLVTTTTGPAAAVRPATQVQQQQQQQQIFINPQRAVSAALGAGQMSPSLLSQLNQIPATIKLHQPQPAQTAQLHRGGIVATKAAPIPQLQQHQSIIQQHIISSPAAGADKRQLLLGGIKETTLITQTPATAAPLQQSQLNSQTIITTQPPVGTTSVVGAALQQQQQHIRTVLEQQQQHHPSIIQQKITMPMALTEAAKVKPATAIPIAKKPMPPPTPCASPAQQHSVQMPVLKPTQQGQVVSGESKPTIIAESKPAEQPAVTAVTVANNPSVAATAAATATTTTGATSSVTNANPSAATAVSAVPVDVNWLFICDWRNCPRRKFKSLNELQHHVCNVHCPDHLDSGAEIYCQWGSGPSLCDNIARKRYSLMTHLVDRHLALDDLRASVQRRLATGIHNVAPAQPTVTIVRNVSNANASATATAAAGATAATAVGTSALQAIKRHSADFLNSKELMDENEGPVTKSIRLTAALILRNLVNYSVTAKRSLKRYEPHLANVAFSNVEASGVLSHILHELSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2