Basic Information

Gene Symbol
Arid2
Assembly
GCA_035046225.1
Location
JAWNOD010000059.1:1062042-1067542[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-24 2.4e-21 75.8 0.0 2 89 88 174 87 174 0.93
2 2 4.4 8e+03 -2.8 0.0 27 65 1616 1656 1604 1668 0.74

Sequence Information

Coding Sequence
ATGACGTCCATTGATAGTGTACGCGTGCTGCTCCagtcgctgccagcagcatcgcctgctgctgccgccaacagcagcaacaacaacaacacgcagcTAAATGAGTCGACGCCGGCTAAAGTCGGTGCTGCGGGAGCCCCATTGCGCGCGAGAAatatgcagcaacaacagttacaGGCGCAACAGCAATTAATTTTCGGCACCCCGGAAAAGATGCAAATTGGAGAGCCAATCGCAACTGAAGACCAGCAGCTGAGTGCTCCGGACGAATTTTGGCGTGATTTGCATCAGTTCCATGAGCGGCGCGGCACCCCACTGACGCAGGCGGCCAAGATCAGTGGCCAGCATGTGGACTTGTACCGGCTATATCAGGAGGTCACGGAACGCGGTGGCTTCAATAAGGTCAACATGCGGGACGAGTGGGACGAGGTGTACAGCGCGCTGGACACGCTGCGTGACCGTTGCGTTAATGGCACCGCTGGCATAAAGCACATCTATCGTCGCTACCTGGATAAATACGAGCGCCTGAACTTCTTAGGCGAGGACCCGGACAAGCTGGAAGCCTTGGAGGCGGCCATCGAGTGTGTCGAACTGGGCGCCAGCGCCAGTCGTGCGCGCTCTCGTGCCTTGGCCGGCGGCGCCATTGGAGGCGCCGGTGGCAGCCTGACAGGCAGTGGATTGGGAAGCATTTTCGGCATGCCGCACTCGACGCTGACAGCCGTGCCCATGGCGTACAATCAGCGCCAGCACATGGTGAATGTGGATCGTCGTCGGCAGTACAAAATGTCCACGCAGCTGCACAAGCACAGCAGCTATgacaagctgctgctgtcgctcatATCGCCGCTGCCCAACGAGCAGGATTTCGCCATCAATGTGTGCACGCTGATGGCCAACGAACCACGCTCAACTCTGCAGCTGACCGAGTGCCCCAAGCTCCTGGATGTGCTGCTGGCCCATCTGGGCGTCTATGCGGACTACAGCATGCGCCAGCTATTCCAGCATGGCCACAACAATGCCGGCACGTTGGTGCGACGGCATTCGAAGCTAAACTTTTGGCGGGATTTGCTGTACGACAAGCCACAAATCCTGGACTTGTACACGGATGAGCAAGCATGGCTGGACAATGGCCTGATCAGCAAGGAGAGTGATGCCTTCGATGATTATCTGTTCCAGTCCGATGAGCTCGATTTCGAGCTGGACTTCTTGAACCTGCGCCGCAGTCACGGCACCGACGAACGCATTGGCCAGCGCGTCCTACAAATTGTGCAGCTATTGAGGAGCCTAAGTTTCCATCAGGAGAACGTCCCGCTGCTAGCCTCGAATCGTACGCTCTGGCGATACCTGGTCATGGGCGCCAATGTTCGTTGGAGTAACATCCACATTCAGGCTTTGGAAACTGCTGGCAATCTGGCGCAGCAGTTCGAGCTGCTCGATCCCGCCACGGACGAGCTGTCGCGCAATCTACTGGCCACGCTTTGCGAGGGTGTCGAGTCGAATGACCGTGCCGTAATAATCAGCTGCCTGGAGATACTTTACAAGCTGTGCGGACGCGAAGGCAATGCCCAGCACATAAATCGATGCCTCGGCTTGGATTTCTACCATCGCGTCATGCTGTTTCTGTCGCTGACGGATGTGATGTTGCTCATCTTTACTCTGGAGGCGATCTACGCGTTGAGCACGTTGGGTGCACGTCCATGCTCCATGCTGATGCAGGTGCGCGGTCTGCTAGATCAGTTGGTGGCTTTGCTAACTGTTGAGGCGCAATCGTACGGCGCTGCCGGCTGCATATTGATGCGGGTTGTTGAGGTGGTGCCAGGCAACATGTTGTCTACGATGTCCCAAACTATGTCCAGCAATCAGATGACGCCACTGATGACGGtcaagcagccgcagctgcaggcgccagcgccagcgccggtTGTATCACTGCCTCTACCAACACCAACGCAGGTGCAGGTGCTGCCGCCACAGCCGGAGACTGTTTCGCTtccggctgctgctcctgctccagctcctgctcctgctcccgtAATTGCTCCTGCACCTGCTCCCacgcctgcgcctgcgccagCGCCTCTGCCCCTGCCTATGCCGAGCTTGCCGCAAGTGCAGCTGCCAGTGCCTAGTTTGCCGCAGGTGCAGCTTCCGCCACTGCCCACCCCACAACCACCAGCTCCACCTGCTCCCACATCAGTAGTAGCCCCTGCAGTGACGGTGCCTGCAGCGCCATCAGCACCGCAGAGCTTCACCCACGACGACGAGACCTATGCGCTGGCCTGGCTGGGCGCCACCTACGAGCGGGCCGGCAACGGGCACGAGTACCGcgtggagcagcaggagctgtaCACCATTTACCTGTCGCATTGCCAGAAGGCGGGCAAGCATTCGGTGGTCAACCGTCAGCAGTTTCCGCGTCTCGTGCGACTCATCTTCAATGCGACTGTGGGGCCCGCCATTGTGCGGCAGATGGATGGAACGGATCTTCCAGGCACACACTACGTGGGCATACGGATGCGCGCACAACCATTgcccatgcagcagcagcagcaacaacaacagaaagtGACAACAGTTCCTACCATAGTAACTGCTAAGAAGGAACCGACGCTGGCGCAGAAGTCGGACTCAACGAGTGGGGAAGCGGGCGAGGACGTGCTTGCCTCACCCACGCCCAGCTCCTCGCTCATTAAGAGCCTGCTGGCCAACAAGGTCAACGAGCGACAGCTGAAACAGAAGGCGCAGGCGCAACCGCCCGCCCTGGTGGCCACCACAGCCACGTCGACTGGCTCGCCAGCCGGGCAGCCCATCAAGGTGACCTCCACGGCAATCAGTGCCTTTGTGAATAATCCGTTGATGCAGCACACGCCCGTGAAGGTGGGCCAAACCACCATCAAGCCCTTGCATCCGCAGCTGCCGATGGAGAAGAAGCCAATGACAGActcggcgccgccgccgctcgcCCCGCTCAGTGGGTCCAATGTGCTTACGAAGGATGCGCAAGGACGCACCGTGATAATACAATCGAAGCGGAAGCTGACCATCGATGACGAGCAGAACAAGCGGGTGGCATTGGACAGCTCCATTGCCCCCACTGGCAACAATGAGCCGCAGGTGACGCCCTCCAAGAACGCTGCCAATCTCTATGCAGATTTGGCTGCCTCCATACTGGAGGACGAGGATTTGGACGATGTGCCGCCGTTGGCAGCGTCCAGTCAAGAGCAGCAACCGacgccacaacaacagcagcaacaacagcaacaacaacttcaacaactccaacaccagcaacaacaacaattgcaattgattcCTGCTAAGGTACATCCGACCCAGCGGCAGTTGATCTTTCCCACTGGCAACACGGCGGCGCCACCGCCGCAGTTGAAGCTGGCCACGACGGCCACCATCAAGACGGATCAGGGACTGCAGACGGTGCCGGTCATATTGCAGCAGAagacggagcagcagcagcagcagcagccgacgcaGACGCAGTACGTGCTGGCCACCAACCAGCAGGGTCAAACCTATCTGGTGGCACAACAGTCCGCACCAGTGGCCGCATCGTCCAATGCGCCCGGCACACCCACTCTGCTGGTGGCTCAAGccccgcagcagcagacgaagaCGATCATCAtattgcagcagccgccgggGGTGAGCACCAGCAATGCGCCCGGCACGCAGAAAGTCATCATGACAACAGCGCAGGGGCAACAGGTGTTGGTGACAACCACCACGGCGCCTGCGTCGGCGGTGCGTCCGGCCGCCCaagtccagcagcagcagcaacagatcTTTATAAATCCGCAGCGTGCGGTGACCGCCGCCTTGGGGGCGGGTCAAATGTCGCCCTCCCTGCTCTCACAGCTGAACCAGATACCTGCGACCATAAAGCTGCATCAGCCGCAGCCGGCGCAAGCCGCGCAGCTGCATCGTGGCGGCATAGTTGCCAGCAAGTCAGCGCCCATAcctcaactgcagcagcaccagtcCATCATACAGCAGCACATCATCTCGAGTCCAGCAGCTGGCGTGGacaagcggcagctgctgctgggcggcaTCAAGGAAACCACGCTTATCACCCAAACGCCCGCAACGGCTGCCCCATTGCAGCAGAGTCAACTCAATTCGCAGACCATCATAACCACGCAGCCACCGGTGGGCAGCACGTCAGTTGTGGGcgctgcactgcagcagcagcagcagcacatacGCAACGTgctggagcaacagcagcagcaccatccCTCCATCATCCAGCAGAAGATTACGATGCCCACGGCGCTCACGGATGCGTCCAAAGTGAAGCCTGTTCCAGCACTGCCCATTGCCAAGAAACCCATGCCGCCGCCCACGCCATCTCCTTCTTCTGCACAGCAGCATCCGGTGCAAATGCCTGTGCTGAAGCCCAGTCAGCAGGGGCAGGCGCAGGTGCAGGTGGTGAGCGGCGAGTCAAAGCCCACAATTATAGTTGAATCAAAGCCTGCGGAGCAGCCAGCGGTGGCAGCAGTAACTGTGGCCAACAGTGCCGTGGCAGCAACTGTAGTggccacagcagccacaacaacggGCACGAGTATCGTTACCAATGTCAGTCCCTCAGTTGCTCCAGCTGTGAGCGCTGTGCCCGCGGATGTCAATTGGCTGTTTATTTGCGATTGGCGTAATTGTCCACGTCGAAAGTTCAAGTCGCTCAACGAGCTGCAACACCACGTCTGCAACGTACACTGTCCGGATCACTTGGACTCGGGCGCTGAGATCTATTGCCAGTGGGGCAGCGGCCCCAGTCTGTGCGACAATATTGCGCGCAAGCGTTACTCGCTGATGACGCACCTCGTCGACCGTCATCTGGCGCTGGATGATCTGCGAGCCAGCGTGCAGCGACGCCTGGCCACTGGCATACACAATGTGTCGCCCGCGCAGCCGACGGTGACCATAGTGCGCAACGTGGGCAATGCCAATGCgccggcaacggcggcagcagctgctccagccacTGCAGCCACTGCTGTGGGCACCTCTGCTCTGCAGGCGATCAAGCGGCATTCAGCCGACTTCCTCAACTCTAAGGAACTGATGGATGAGAACGAGGGTCCAGTCACAAAGAGCATACGGCTCACGGCTGCGCTGATCTTGCGGAATCTGGTCAATTACTCGGTGGCCGCCAAACGAAGTTTGAAGCGTTACGAGCCGCACCTGGCCAACGTGGCCTTCAGCAATGTGGAGGCCAGTGGCGTACTCTCCCACATACTACACGAGCTGAGTCAGTAG
Protein Sequence
MTSIDSVRVLLQSLPAASPAAAANSSNNNNTQLNESTPAKVGAAGAPLRARNMQQQQLQAQQQLIFGTPEKMQIGEPIATEDQQLSAPDEFWRDLHQFHERRGTPLTQAAKISGQHVDLYRLYQEVTERGGFNKVNMRDEWDEVYSALDTLRDRCVNGTAGIKHIYRRYLDKYERLNFLGEDPDKLEALEAAIECVELGASASRARSRALAGGAIGGAGGSLTGSGLGSIFGMPHSTLTAVPMAYNQRQHMVNVDRRRQYKMSTQLHKHSSYDKLLLSLISPLPNEQDFAINVCTLMANEPRSTLQLTECPKLLDVLLAHLGVYADYSMRQLFQHGHNNAGTLVRRHSKLNFWRDLLYDKPQILDLYTDEQAWLDNGLISKESDAFDDYLFQSDELDFELDFLNLRRSHGTDERIGQRVLQIVQLLRSLSFHQENVPLLASNRTLWRYLVMGANVRWSNIHIQALETAGNLAQQFELLDPATDELSRNLLATLCEGVESNDRAVIISCLEILYKLCGREGNAQHINRCLGLDFYHRVMLFLSLTDVMLLIFTLEAIYALSTLGARPCSMLMQVRGLLDQLVALLTVEAQSYGAAGCILMRVVEVVPGNMLSTMSQTMSSNQMTPLMTVKQPQLQAPAPAPVVSLPLPTPTQVQVLPPQPETVSLPAAAPAPAPAPAPVIAPAPAPTPAPAPAPLPLPMPSLPQVQLPVPSLPQVQLPPLPTPQPPAPPAPTSVVAPAVTVPAAPSAPQSFTHDDETYALAWLGATYERAGNGHEYRVEQQELYTIYLSHCQKAGKHSVVNRQQFPRLVRLIFNATVGPAIVRQMDGTDLPGTHYVGIRMRAQPLPMQQQQQQQQKVTTVPTIVTAKKEPTLAQKSDSTSGEAGEDVLASPTPSSSLIKSLLANKVNERQLKQKAQAQPPALVATTATSTGSPAGQPIKVTSTAISAFVNNPLMQHTPVKVGQTTIKPLHPQLPMEKKPMTDSAPPPLAPLSGSNVLTKDAQGRTVIIQSKRKLTIDDEQNKRVALDSSIAPTGNNEPQVTPSKNAANLYADLAASILEDEDLDDVPPLAASSQEQQPTPQQQQQQQQQQLQQLQHQQQQQLQLIPAKVHPTQRQLIFPTGNTAAPPPQLKLATTATIKTDQGLQTVPVILQQKTEQQQQQQPTQTQYVLATNQQGQTYLVAQQSAPVAASSNAPGTPTLLVAQAPQQQTKTIIILQQPPGVSTSNAPGTQKVIMTTAQGQQVLVTTTTAPASAVRPAAQVQQQQQQIFINPQRAVTAALGAGQMSPSLLSQLNQIPATIKLHQPQPAQAAQLHRGGIVASKSAPIPQLQQHQSIIQQHIISSPAAGVDKRQLLLGGIKETTLITQTPATAAPLQQSQLNSQTIITTQPPVGSTSVVGAALQQQQQHIRNVLEQQQQHHPSIIQQKITMPTALTDASKVKPVPALPIAKKPMPPPTPSPSSAQQHPVQMPVLKPSQQGQAQVQVVSGESKPTIIVESKPAEQPAVAAVTVANSAVAATVVATAATTTGTSIVTNVSPSVAPAVSAVPADVNWLFICDWRNCPRRKFKSLNELQHHVCNVHCPDHLDSGAEIYCQWGSGPSLCDNIARKRYSLMTHLVDRHLALDDLRASVQRRLATGIHNVSPAQPTVTIVRNVGNANAPATAAAAAPATAATAVGTSALQAIKRHSADFLNSKELMDENEGPVTKSIRLTAALILRNLVNYSVAAKRSLKRYEPHLANVAFSNVEASGVLSHILHELSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00493429;
90% Identity
iTF_00476406;
80% Identity
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