Basic Information

Gene Symbol
Arid2
Assembly
GCA_035047485.1
Location
JAWNPN010000085.1:1574065-1579475[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-24 2.5e-21 75.8 0.0 2 89 84 170 83 170 0.93
2 2 9 1.8e+04 -4.0 0.0 28 62 1601 1637 1591 1649 0.71

Sequence Information

Coding Sequence
ATGACGTCCATTGACAGTGTACGCGTGCTGCTTCAGTCTCTGCCAGCAGCATCGCCTGCtgttgccaacaacaacaacacacagcaAAATGAGTCGACGCCGGCAAAACTTGGCGCTGCGGGAACACCGTTGCGCGCGAGAAatacacagcaacaacagctacaagcACAACAGCAATTATTTTTTGGAACTCCAGAGAAGTTACAAGCTGGAGATGCAACTGGAACTGAAGACCAGCAGCTAAGTGCTCCGGACGAATTTTGGCGTGATTTGCATCAGTTTCATGAGCGTCGAGGCACCCCACTGACGCAGGCGGCCAAGATTAGTGGCCAGCATGTGGATTTGTATCGGCTGTACCAGGAGGTCACGGAGCGCGGTGGCTTTAATAAGGTCAACATGCGCGACGAGTGGGACGAGGTGTACAGTGCGCTGGACACGCTGCGGGATCGCTGCGTTAATGGCACCGCTGGCATAAAGCATATCTATCGTCGCTATCTGGATAAATACGAGCGCTTAAACTTTTTGGGCGAGGATCCAGACAAGCTCGAAGCCTTGGAGGCGGCCATCGAGTGTGTCGATCTGGGCGCCAGCGCCAGTCGTGTGCGTTCCCGTGCCTTGGCCGGCGGTGCCATTGGAGGAGCAGGTGGCAGTTTGATAGGCAGTGGCTTGGGAAGCATTTTTGGCATGGCTCACTCTACGCTGACGGCCGTGCCCATGGCGTACAATCAGCGCCAGCATATGGTAAATGCGGATCGCCGTCGTCAGTACAAAATGTCTACGCAGCTGCACAAGCACAGCAGCTATgacaagctgctgctgtcgctgataTCGCCGCTGCCCAACGAGCAGGATTTTGCCATCAATGTATGCACGCTGATGGCCAATGAGCCGCGTTCCACTTTACAACTGACCGAGTGCCCCAAGCTACTGGATGTGCTGCTCGCCCACTTGGGCGTCTATGCGGATTACAGCATGCGTCAGCTGTTCCAGCACGGCCACAACAATACGGGCATGTTGGTGCGAAGGCACTCCAAACTAAATTTTTGGCGGGATTTGCTCTACGATAAGCCCCAAATTCTGGACTTGTATACGGATGAGCAAGCCTGGCTGGACAATGGTCTGATTAGCAAGGAGAGTGATACTTACGATAACTATCTGTTCCAATCTGACGAGCTCGATTTCGAGCTGGACTTCTTGAATCTGCGCCGCAGTCACGGCACAGACGAACGGATTGGCCAGCGTGTACTCCAAATCGTACAGCTATTGAGAAGCTTAAGCTTCCACCAGGAGAACGTCGCACTACTTGCAACAAACCGCACGCTGTGGCGATATTTGGTCATGGGCGCCAATGTGCGTTGGAGCAATATCCACATTCAGGCTTTGGAAACAGCCGGGAATCTGGCGCATCAGTTCGAGCTACTGGACCCCGCCACGGACGAGCTATCGCGGAATTTGCTGGCCACGCTGTGCGAGGGCGTCGAATCGAATGATCGGGCCGTGATAATCAGCTGCCTGGAGATACTTTACAAGCTGTGCGGACGCGAGGGCAATGCCCAGCACATAAATCGTTGCCTCGGCTTGGACTTCTATCAGCGTGTTATGCTCTTGCTGTCGCTGACAGATGTGATGCTGCTAATCTTCACCCTGGAGGCGATCTACGCATTGAGCACGTTGGGTGCACGGCCATGTTCCATGTTGGCGCAGGTGCGTGGTCTGCTAGATCAGTTGGTAGCTCTGCTGACGGTGGAGGCGCAGTCGTACGGCGCTGCAGGCTGCATACTGATGCGGGTCGTTGAGGTGGTGCCCGGCAACGTATTGTCCACATTGTCACAAGCTTTGCCTAGCAATCAGATGACGCCATTGATGACGGTTAAGCaggcgcagccgcagccgccagCACCAATTGTGTCATTGCCTCTACCAGCACCCACACAGGTGCAGGTGCTGCCGCCACAGCCGGAGACCGTTTCGGTTCCAGTGGCCgctcccgctgctgctcctgtaaCTGCTCCTGTTGCCATACCTGCGCCTATGCCCCTGCCTATGCCAGTGCCCAGCTTGCCGCACGTGCAGCTGCCAGTGGCTAGTTTGCCGCAGGTGCAGCTTCCGCCACAGCCCACCGTACAagtgccagcgccagcagctccaGCGTCAGTAGCATTAGCAGCCACTACGGTTGCGCTGCCCGCGGCGCCATCAGCGCCGCAAAGCTTCACCCACGAAGACGAGACCTACGCGCTGGCCTGGCTGGGCGCAACTTATGAGCGAGTCGGCAACGGACACGAGTATCGCGTGGAGCAGCAGGAGTTGTACACCATTTACCTATCGCATTGCCAGAAGGCGGGTAAGCATTCGGTGGTCAACCGTCTGCAGTTCCCGCGTCTCGTGCGCCTCATCTTCAACGCAACCGTAGGACCCGCCATTGTACGACAGATGGATGGAACGGAACTTCCCGGAACACACTATGTGGGCATTAGGATGCGCGCACAGCCCTTGCccgtgcaacagcagcagccgcagcagcagcaacagcaacagaaagtAACGACAATAGCTGCCGCAATAGCTGCCAAAAAGGAGCCAACGCTGACACCAAAGTCGGACTCAACAATTGGCGAAGCGGCTGAGGAAATGATTGcctcgcccacgcccacgtccACGCCGAGTTCGTCGCTCATCAAGAGCTTGCTGGCAAACAAGGTTAACGAGCGGCAGTTGAAGCAAAAGGCGCAGGCGCAACCGCCCGCTCTTGTGGCCACCACAGCATCGTCAACTGGCTCGTCTGCCGGACAGCCCATCAAGGTAACCTCCACGGCAATCAGCGCCTTTGTCAACAATCCGTTGATGCAACACACGCCCGTGAAGGTGGGCCAGACCACCATTAAGCCGTTGCATCCGCAACTGCCGCCAATGGAGAAGAAGCCAATGACAGACTCGGCGCCACCGCCACTCGCCCCACTCAGTGGGTCCAATGTGCTAACAAAGGACGCGCAAGGACGCACCGTAATCATACAATCCAAACGGAAGCTGACCATCGACGACGAACAAAATAAGCGGCTGGCATTGGAAAGCAGCAACGCGCCAAGTGGTAAGGACGAGCCGCAGGTGACGCCCTCCAAGAATGCGGCCAATCTCTATGCGGATTTGGCTGCCTCCATACTAGAGGACGAGGATCTGGATGATGTGCCGCCGTTGGCAACCTCCAGTCAAGAGCAACAACCAacgccacagcaacaacaacagcaacagcagcagcagcagcagcagcagcagcaactgcagcttaTATCTAAGGTGCACTCAACACAGCGGCAGCTCATCTTTCCGAGTGGCAGCTCgccggcgccgccgccgcagctaAAATTGGCCACCACGGCAACCATCAAAACGGAGCAGGGCCTGCAAACGGTGCCGGTTATACTGCAGCAGaagacagagcagcagcagcagccaacgcaGACACAGTACGTGCTGGCCACCAACCAGCAGGGACAGACTTACTTGGTGGCTCAGCAGTCGGCCCCGGTGGCAGCCTCACAGAGTGCGCCCGGCACGCCCACTCTGCTGGTTACTCaagcgccgcagcagcagacaaagACGATAATCAtactgcagcagccgccgggCGTGAGTGCCAGCAATGCGCCTGGCACACAGAAGGTCATCATGACGACAGCGCAGGGGCAGCAGGTGCTGGTGACAACCACTACAGCGCCTGCCGCGGCGGTACGCCCCGCCACCCaagtccagcagcagcagcagcagcagcagcagcaacagatatttataaatccGCAACGTGCAGTCTCCGCCGCATTGGGCGCGGGACAAATGTCGCCCTCGCTGCTCTCACAGCTCAACCAGATACCTGCAACCATAAAGCTGCACCAGCCGCAGCCAGCGCAAGCCGCGCAGCTGCATCGTGGCGGCATAGTGGCCAGCAAAACAGCGCCTATAcctcaactgcagcagcatcagtcCATCATACAGCAGCACATCATCTCGAGTCCGGCTGCTGGCGCAGACAagcggcagctgcttctgGGCGGCATCAAGGAAACGACGCTGATTACCCAAACGCCCGCAACGGCTGCCCCCTTGCAGCAAAGTCAACTCAACTCGCAGACAATCATAACCACTCAACCGCCGGTGGGCAGCGCGTCTGTTGTGGGCGcggcactgcagcagcaacagcaacacatacgcagcgtgctggagcagcagcagcagcatcatcccTCCATTATACAGCAGAAGATTACGATGCCCATAGCGCTCACGGAAACAGCCAAGGGGAAGCCTGCGCCGTCAATACCCATTGCCAAGAAACCAATGCCGCCGGCCACAGCATCTACGCCTCCTGCACAGCAGCACCCGGTGCAAATGCCTGTGCTGAAGCCCACGCAGCACGAATCAAAACCGACAATAATAGTTGAGTCAAAGCCAGCGGAGCAGCCGGCtgtcacagcagcaacagttgctagCAGCCCCTCGACTGCGGCAACAATAGTTGCcactgcaacaacagcggccACGACGATTGCAACGAACGCCAATGCCTCAGCTGTGCAAGCTGTGAGCGCTGTGCCCGTGGATGTAAATTGGTTGTTCATCTGTGATTGGCGCAATTGTCCGCGGCGGAAATTCAAATCGCTTAACGAGTTGCAGCATCACGTCTGCAATGTGCACTGTCCGGACCATCTGGACTCGGGCGCGGAGATCTATTGCCAGTGGGGCAGTGGGCCAAGCCTATGCGACAACATTGCGCGCAAGCGTTACTCGCTGATGACGCATCTCGTCGATCGTCACCTGGCGCTGGATGATTTGCGCGCCAGCGTACAGCGACGGCTTGCCACTGGCATACACAATGTTTCGCCCGCTCAGCCAACGGTCACCATAGTTCGCAATGCGGGAAGTGCCAATGCGccggcaacggcggcagcagctgctccagctgcagccactGCTGTGGGAACTTCTGCGCTGCAGGCTATCAAACGGCACTCGGCTGACTTCCTGAACTCGAAGGAACTGATGGATGAGAATGAGGGCCCAGTCACAAAGAGCATACGGCTCACGGCTGCGCTGATATTGCGGAACCTGGTCAATTATTCAGTGACGGCCAAGCGAAGTTTAAAGCGTTACGAGCCGCATCTGGCCAATGTGGCCTTTAGCAATGTGGAGGCCAGTGGCGTTCTGTCCCACATACTACACGAGCTGAGTCAGTAA
Protein Sequence
MTSIDSVRVLLQSLPAASPAVANNNNTQQNESTPAKLGAAGTPLRARNTQQQQLQAQQQLFFGTPEKLQAGDATGTEDQQLSAPDEFWRDLHQFHERRGTPLTQAAKISGQHVDLYRLYQEVTERGGFNKVNMRDEWDEVYSALDTLRDRCVNGTAGIKHIYRRYLDKYERLNFLGEDPDKLEALEAAIECVDLGASASRVRSRALAGGAIGGAGGSLIGSGLGSIFGMAHSTLTAVPMAYNQRQHMVNADRRRQYKMSTQLHKHSSYDKLLLSLISPLPNEQDFAINVCTLMANEPRSTLQLTECPKLLDVLLAHLGVYADYSMRQLFQHGHNNTGMLVRRHSKLNFWRDLLYDKPQILDLYTDEQAWLDNGLISKESDTYDNYLFQSDELDFELDFLNLRRSHGTDERIGQRVLQIVQLLRSLSFHQENVALLATNRTLWRYLVMGANVRWSNIHIQALETAGNLAHQFELLDPATDELSRNLLATLCEGVESNDRAVIISCLEILYKLCGREGNAQHINRCLGLDFYQRVMLLLSLTDVMLLIFTLEAIYALSTLGARPCSMLAQVRGLLDQLVALLTVEAQSYGAAGCILMRVVEVVPGNVLSTLSQALPSNQMTPLMTVKQAQPQPPAPIVSLPLPAPTQVQVLPPQPETVSVPVAAPAAAPVTAPVAIPAPMPLPMPVPSLPHVQLPVASLPQVQLPPQPTVQVPAPAAPASVALAATTVALPAAPSAPQSFTHEDETYALAWLGATYERVGNGHEYRVEQQELYTIYLSHCQKAGKHSVVNRLQFPRLVRLIFNATVGPAIVRQMDGTELPGTHYVGIRMRAQPLPVQQQQPQQQQQQQKVTTIAAAIAAKKEPTLTPKSDSTIGEAAEEMIASPTPTSTPSSSLIKSLLANKVNERQLKQKAQAQPPALVATTASSTGSSAGQPIKVTSTAISAFVNNPLMQHTPVKVGQTTIKPLHPQLPPMEKKPMTDSAPPPLAPLSGSNVLTKDAQGRTVIIQSKRKLTIDDEQNKRLALESSNAPSGKDEPQVTPSKNAANLYADLAASILEDEDLDDVPPLATSSQEQQPTPQQQQQQQQQQQQQQQQLQLISKVHSTQRQLIFPSGSSPAPPPQLKLATTATIKTEQGLQTVPVILQQKTEQQQQPTQTQYVLATNQQGQTYLVAQQSAPVAASQSAPGTPTLLVTQAPQQQTKTIIILQQPPGVSASNAPGTQKVIMTTAQGQQVLVTTTTAPAAAVRPATQVQQQQQQQQQQQIFINPQRAVSAALGAGQMSPSLLSQLNQIPATIKLHQPQPAQAAQLHRGGIVASKTAPIPQLQQHQSIIQQHIISSPAAGADKRQLLLGGIKETTLITQTPATAAPLQQSQLNSQTIITTQPPVGSASVVGAALQQQQQHIRSVLEQQQQHHPSIIQQKITMPIALTETAKGKPAPSIPIAKKPMPPATASTPPAQQHPVQMPVLKPTQHESKPTIIVESKPAEQPAVTAATVASSPSTAATIVATATTAATTIATNANASAVQAVSAVPVDVNWLFICDWRNCPRRKFKSLNELQHHVCNVHCPDHLDSGAEIYCQWGSGPSLCDNIARKRYSLMTHLVDRHLALDDLRASVQRRLATGIHNVSPAQPTVTIVRNAGSANAPATAAAAAPAAATAVGTSALQAIKRHSADFLNSKELMDENEGPVTKSIRLTAALILRNLVNYSVTAKRSLKRYEPHLANVAFSNVEASGVLSHILHELSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00493429;
90% Identity
iTF_00476406;
80% Identity
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