Basic Information

Gene Symbol
Arid2
Assembly
GCA_035045365.1
Location
JAWNPC010000646.1:821963-827434[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-24 3.6e-21 75.6 0.0 2 89 85 171 84 171 0.93
2 2 4.2 9.7e+03 -2.8 0.0 27 65 1613 1653 1601 1666 0.74

Sequence Information

Coding Sequence
ATGACGTCCATTGATAGTGTACGCGTGCTGCTGCAGTCTCTGCCAGCAGcatcgcctgctgctgctgctgccaacaacaacacgcagCAAAATGAGTCGACGCCGGCTAAACTTGGCGCTGCGGGAACACCATTGCGCGCCAGAaatgcacagcaacaacagctacaagcACAACAGCAATTCACTTTTGGAACGCCAGAAAAGCCACTAACTGGAGATGCCCCAGGCACTGAAGACCAGCAGCTAAGTGCCCCGGAAGAATTTTGGCGAGATTTGCATCAGTTTCATGAGCGGCGCGGCACCCCACTGACGCAGGCGGCTAAGATTAGTGGCCAACATGTGGATTTGTATCGGCTATATCAGGAGGTCACGGAACGCGGTGGCTTTAATAAGGTCAACATGCGCGACGAGTGGGACGACGTGTACAGCGCGCTGGACACGCTGCGGGATCGTTGCGTCAATGGCACCGCAGGCATAAAGCATATCTATCGTCGCTATCTGGATAAATACGAGCGCCTAAACTTTTTGGGTGAGGATCCAGACAAGCTGGAAGCCTTAGAGGCGGCTATCGAGTGTGTTGAGCTGGGCACCAGCGCCAGTCGTGTGCGTTCTCGTGCCTTGGCCGGCGCTGCCATTGGCGGTGCAGGTGGCAGTTTGACGGGCGGTGGCTTGGGAAGCATTTTCGGTATGCCACACTCTACGCTGACGGCCGTGCCCATGGCGTACAATCAGCGACAGCATATGGTGAATGCGGATCGCCGGCGTCAGTACAAAATGTCCACACAGCTGCACAAGCACAGCAGCTATgaaaagctgctgctgtctcttATATCGCCGCTGCCTAACGAGCAGGATTTCGCTATCAATGTATGCACGCTGATGGCCAACGAGCCACGCTCCACTTTGCAACTGACTGAGTGCCCCAAGCTGCTGGATGTGCTGCTCGCCCATCTGGGCGTCTATGCGGATTACAGCATGCGACAGCTATTCCAGCATGGCCACAACACTACGGGCATGCCGGTGCGCAGGCATTCGAAACTAAATTTTTGGCGCGATTTGCTGTACGATAAGCCACAAATTCTTGACTTATATACGGATGAACAAGCTTGGCTGGACAATGGTCTGATTAGCAAGGAGAGTGATCCTTGCGATGATTATCTGTTCCAGTCCGATGAGTTCGATTTCGAGCTGGACTTTCTGAATCTGCGCCGCAGCCATGGCACAGACGAACGCATTGGTCAGCGTGTACTACAAATTGTGCAGCTATTGAGAAGTTTGAGCTTCCATCAGGAGAACGTCACGCTACTTGCTTCCAATCGCACGCTCTGGCGATATTTGGTCATGGGCGCCAATGTGCGCTGGAgCAACATCCACATTCAGGCTTTGGAAACGGCTGGGAATCTGGCACACCAGTTCGAGATACTCGATCCTGCTACGGACGAGCTATCGCGGAATTTGCTGGCCACGTTGTGTGAAGGCGTCGAGTCGAATGATCGTGCCGTGATAATTAGCTGCCTGGAGATACTTTATAAGCTGTGCGGACGCGAGGGCAATGCCCAGCACATCAATCGCTGCCTTGGCTTGGATTTCTATCAGCGTGttatgctgttgctgtcgctgacAGACGTGATGTTGCTCATCTTTACCCTGGAGGCGATTTACGCGTTGAGCACGTTAGGGGCACGTCCGTGTTCCATGCTGATGCAGGTGCGTGGGCTGCTTGATCAGCTGGTGGCTTTGCTAACTGTTGAGGCGCAATCATACGGCGCTGCTGGCTGCATATTGATGCGAGTTGTTGAGGTGGTGCCAGGCAACATATTGTCTACATTGTCCCAAACTATGCCCAGCAATCAGATGACGCCATTGATGACGGTTaagcagccgcagtcgcagtcgcagccgccgGCGCCAATTGTGTCGCTGCCCTTACCAGCACCAACACAGGTACAAGTGCTACCGCCACAGCCGGAGACCGTTTCTCATCCTGTGGCTGTTCCTGTAACTACTCCTGCTCCAGTTGCCATACCTGCGCCTATGCCTATGGCTATGTCCCTGCCCCTGCCTATGCCAGTGCCAAGCTTGCCCCAAGTGCAGCTGCCAGTGCCTAGTTTGCCGCAGGTGCAGCTTCCGCCACCGCCCACCCTACAAGTACCAGCTCCACCTGCTCCAGCCTCAGTAGCAGCCACTACAATCGCGCTGCCCGCGGCGCCATCAGCGCCGCAAAGTTTTACCCATGACGACGAGACCTATGCCCTAGCCTGGCTGGGCGCCACTTACGAGCGAGCCGGCAACGGTCACGAGTATCGCGTGGAGCAACAGGAGCTGTACACCATCTACCTATCGCATTGCCAGAAGGCGGGCAAGCATTCGGTGGTCAACCGACAGCAATTTCCGCGTCTCGTGCGACTCATCTTCAATGCAACCGTTGGACCCGCCATTGTACGACAGATGGATGGAACTGAACTTCCCGGAACACACTATGTGGGCATAAGGATGCGCGCACAACCCTTGcccatgcagcagcagcaacaacataaaGTAACACCAATACCTACCGCAATAGCTGCTAAAAAGGAATCAATGCTAACGCCAAAATCGGACTCAACCAGTGCCGAAGCGGGGGACGACGTAGTTGTCTCGCCCACGCCCAGTTCCTCGCTGATAAAGAGCCTGCTCGCAAATAAGGTTAACGAGCGACAGTTGAAACAAAAGGCACAGGCACAACCGCCCGCTCTTGTGGCCACCACATCATCGTCAACTGGCTCGTCAGTCGGGCAGCCCATCAAAGTGACCTCCACGGCAATTAGCGCCTTTGTCAATAATCCGTTGATGCAGCACACGCCCGTGAAAGTGGGTCAAACCACCATAAAGCCGTTGCATCCGCAGCTGCCCATGGAGAAGAAGCCAATGACAGACTCGGCGCCACCGCCGCTCGCCCCACTCAGTGGGTCCAATGTGTTAACTAAGGATGTGCAAGGACGCACCGTAATTATACAATCCAAACGGAAGCTCACCATCGATGACGAGCAAAACAAGCGGCTGGCATTGGAGAGCACCAATGCCCATGCACCCACCGGTAAGGATGAGCCGCAGGTGACACCCTCCAAGAATGCGGCCAATCTCTATGCAGATTTGGCTGCCTCTATACTAGAGGACGAGGATTTGGATGATGTGCCGCCGTTGGCAGCGTCCAGTCAAGACCAACAACCAACgccacatcagcaacaacagcaacaacagcaacatcagcaacagcagcagcagcagcaacaacaacaattgcagctaaTATCTGCTAAGGTGCACTCGACGCAGCGGCAGCTTATCTTTCCCACTGGCAACTCGCCAGCGCCACCACCGCAATTGAAACtggccacaacagcaactattaAAACTGACCAGGGCCTGCAAACGGTGCCAGTTATTTTGCAGCAGAagacagagcagcagcagcagcaaccaacgCAGACACAGTACGTGCTGGCCACCAATCAGCAAGGGCAGACTTATTTGGTGGCGCAGCAGTCGGCGCCAGTGGCAGCATCGCCGAGTGCGCCTGGCACGCCCACTTTGCTAGTTACGCAggcgccgcagcagcagacaaaGACGATAATCATATTGCAGCAGCCGCCGGGCGTGAGTGCCAGCAATGCGCCTGGCACACAGAAAGTCATCATGACGACAGCGCAGGGGCAACAGGTGCTGGTGACAACCACCACAGCGCCTGCGGCGGCGGTGCGTCCTGCTGCCCaagtccagcagcagcagcagcagcagcaacaaatttttataaatcctCAGCGTGCAGTGTCCGCCGCGTTGGGTGCGGGCCAGATGTCGCCCTCGCTTCTGTCACAGCTTAATCAAATACCTGCAACCATAAAGCTGCATCAGCCGCAGCCAGCGCAAGCCGGGCAGCTTCATCGTGGCGGCATAGTTGCCACCAAAACAGCGCCCATACCTCAGCTACAGCAGCATCAGTCCATCATACAGCAGCATATCATTTCGAGTCCTGCAGCTGGTGCAGACAAGCGGCAGCTGCTTCTGGGCGGCATCAAGGAAACAACGCTCATCACCCAAACGCCCGCAACGGCTGCCCCATTGCAGCAGAGCCAACTCAATTCGCAGACAATCATAACCACTCAACCACCGGTGGGCACCACATCAGTTGTGGGCgctgcactgcagcagcaacagcaacacataCGCACCGTgctggagcaacagcagcagcatcatcccTCCATCATACAGCAGAAGATAACAATGCCCATGGCGCTCACGGAAGCGGGCAAAGTGAAGCCTGCGCCAGCAATACCCATTGCCAAGAAGCCAATGCCGCCGCCCACACCATGCGCAACTCCTGCACAGCAGCATTCGGTGCAAATGCCTGTGCTGAAGCCCACTCAGCAAGGGCAGGTGGTCAGCGGCGAATCCAAGCCGACAATAATAGTTGAATCAAAGCCAGCAGAGCAACCAGcagtcacagcagcaacagttgccaatTCATCggtagcagcaacagtagctgtcacagcaacaacaacagcggccaCGAATATTGTAACCAATGCGAATCCCTCAGCTGCTCCAGCtactccagctgctgcagctgtcagCGCTGTACCCGTGGATGTGAATTGGCTGTTTATTTGCGATTGGCGTAATTGCCCGCGTCGGAAATTCAAATCGCTGAACGAGCTGCAACATCACGTCTGCAATGTGCACTGTCCGGATCATTTGGACTCGGGCGCTGAGATCTATTGCCAGTGGGGCAGTGGCCCCAGCCTGTGTGACAACATTGCTCGCAAGCGTTACTCGTTGATGACGCATTTGGTCGATCGCCATTTGGCGCTGGATGATTTACGAGCCAGCGTGCAACGACGCCTTGCCACTGGCATACACAATGTTTCGCCCGCTCAGCCAACGGTCACAATAGTACGCAATGTGGGCAATGCCAATGCACCGGCAACGgcgacagcagctgctccagctaCTGCAGCCACTGCTGTGGGAACTTCTGCGCTGCAGGCAATCAAACGGCACTCAGCTGACTTTCTGAACTCGAAGGAACTGATGGACGAGAACGAGGGCCCAGTCACAAAGAGCATAAGGCTCACGGCTGCGCTGATATTGCGGAATCTGGTCAATTACTCAGTGACGGCCAAGCGGAGTTTGAAGCGTTACGAGCCGCATCTGGCCAATGTGGCCTTTAGCAATGTGGAGGCCAGTGGCGTACTATCCCATATACTGCACGAGCTGAGCCAGTAA
Protein Sequence
MTSIDSVRVLLQSLPAASPAAAAANNNTQQNESTPAKLGAAGTPLRARNAQQQQLQAQQQFTFGTPEKPLTGDAPGTEDQQLSAPEEFWRDLHQFHERRGTPLTQAAKISGQHVDLYRLYQEVTERGGFNKVNMRDEWDDVYSALDTLRDRCVNGTAGIKHIYRRYLDKYERLNFLGEDPDKLEALEAAIECVELGTSASRVRSRALAGAAIGGAGGSLTGGGLGSIFGMPHSTLTAVPMAYNQRQHMVNADRRRQYKMSTQLHKHSSYEKLLLSLISPLPNEQDFAINVCTLMANEPRSTLQLTECPKLLDVLLAHLGVYADYSMRQLFQHGHNTTGMPVRRHSKLNFWRDLLYDKPQILDLYTDEQAWLDNGLISKESDPCDDYLFQSDEFDFELDFLNLRRSHGTDERIGQRVLQIVQLLRSLSFHQENVTLLASNRTLWRYLVMGANVRWSNIHIQALETAGNLAHQFEILDPATDELSRNLLATLCEGVESNDRAVIISCLEILYKLCGREGNAQHINRCLGLDFYQRVMLLLSLTDVMLLIFTLEAIYALSTLGARPCSMLMQVRGLLDQLVALLTVEAQSYGAAGCILMRVVEVVPGNILSTLSQTMPSNQMTPLMTVKQPQSQSQPPAPIVSLPLPAPTQVQVLPPQPETVSHPVAVPVTTPAPVAIPAPMPMAMSLPLPMPVPSLPQVQLPVPSLPQVQLPPPPTLQVPAPPAPASVAATTIALPAAPSAPQSFTHDDETYALAWLGATYERAGNGHEYRVEQQELYTIYLSHCQKAGKHSVVNRQQFPRLVRLIFNATVGPAIVRQMDGTELPGTHYVGIRMRAQPLPMQQQQQHKVTPIPTAIAAKKESMLTPKSDSTSAEAGDDVVVSPTPSSSLIKSLLANKVNERQLKQKAQAQPPALVATTSSSTGSSVGQPIKVTSTAISAFVNNPLMQHTPVKVGQTTIKPLHPQLPMEKKPMTDSAPPPLAPLSGSNVLTKDVQGRTVIIQSKRKLTIDDEQNKRLALESTNAHAPTGKDEPQVTPSKNAANLYADLAASILEDEDLDDVPPLAASSQDQQPTPHQQQQQQQQHQQQQQQQQQQQLQLISAKVHSTQRQLIFPTGNSPAPPPQLKLATTATIKTDQGLQTVPVILQQKTEQQQQQPTQTQYVLATNQQGQTYLVAQQSAPVAASPSAPGTPTLLVTQAPQQQTKTIIILQQPPGVSASNAPGTQKVIMTTAQGQQVLVTTTTAPAAAVRPAAQVQQQQQQQQQIFINPQRAVSAALGAGQMSPSLLSQLNQIPATIKLHQPQPAQAGQLHRGGIVATKTAPIPQLQQHQSIIQQHIISSPAAGADKRQLLLGGIKETTLITQTPATAAPLQQSQLNSQTIITTQPPVGTTSVVGAALQQQQQHIRTVLEQQQQHHPSIIQQKITMPMALTEAGKVKPAPAIPIAKKPMPPPTPCATPAQQHSVQMPVLKPTQQGQVVSGESKPTIIVESKPAEQPAVTAATVANSSVAATVAVTATTTAATNIVTNANPSAAPATPAAAAVSAVPVDVNWLFICDWRNCPRRKFKSLNELQHHVCNVHCPDHLDSGAEIYCQWGSGPSLCDNIARKRYSLMTHLVDRHLALDDLRASVQRRLATGIHNVSPAQPTVTIVRNVGNANAPATATAAAPATAATAVGTSALQAIKRHSADFLNSKELMDENEGPVTKSIRLTAALILRNLVNYSVTAKRSLKRYEPHLANVAFSNVEASGVLSHILHELSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00493429;
90% Identity
iTF_00476406;
80% Identity
-