Dqua061839.1
Basic Information
- Insect
- Dromius quadrimaculatus
- Gene Symbol
- L
- Assembly
- GCA_963989225.1
- Location
- OZ022336.1:10541950-10555361[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 9.1e-05 0.017 17.5 1.1 1 23 58 80 58 80 0.98 2 21 0.33 61 6.2 5.9 1 23 86 108 86 108 0.98 3 21 1.7e-06 0.00031 22.9 4.3 1 23 114 136 114 136 0.99 4 21 1.6e-05 0.0029 19.9 0.3 1 23 142 164 142 164 0.98 5 21 0.001 0.18 14.2 4.0 1 23 202 225 202 225 0.95 6 21 0.0033 0.6 12.6 1.7 1 23 325 348 325 348 0.97 7 21 1.1 2e+02 4.6 0.3 2 23 369 391 368 391 0.94 8 21 0.068 12 8.4 0.3 1 23 457 479 457 479 0.95 9 21 0.15 28 7.3 2.9 2 23 513 534 512 534 0.89 10 21 0.0022 0.4 13.1 0.3 3 23 544 565 542 565 0.93 11 21 0.032 5.9 9.4 0.3 1 23 570 593 570 593 0.92 12 21 0.0022 0.4 13.1 0.4 1 23 668 691 668 691 0.98 13 21 4.8 8.7e+02 2.6 0.5 3 23 755 777 754 778 0.85 14 21 0.0031 0.56 12.7 4.6 2 23 791 812 790 812 0.96 15 21 0.0037 0.67 12.4 0.5 1 23 822 844 822 844 0.98 16 21 7.5 1.4e+03 2.0 2.0 3 23 853 873 852 873 0.93 17 21 0.0025 0.46 12.9 1.5 1 23 963 986 963 986 0.96 18 21 0.28 50 6.5 0.3 1 23 990 1012 990 1012 0.96 19 21 0.0055 1 11.9 2.0 1 23 1020 1042 1020 1042 0.96 20 21 0.0093 1.7 11.1 0.1 1 23 1050 1072 1050 1072 0.96 21 21 0.19 35 7.0 1.0 1 23 1079 1101 1079 1101 0.94
Sequence Information
- Coding Sequence
- ATGAATCCAGTAGAAGCCCTGGGCACAGAGCAAGGCAGTAGTTACCGATCAGAAACTCCGGAAGATCCTCAGACATCTCCAGCGCCTTCTTCGTGCGCAACACCAAATTCCAGTACTGATCTTCCTGATGCTGAGCTGAGCTTTACCGTCGGCATCACGGAGGCTACACCGTACGCTTGTCAATTCTGTGAGAAAGCGTTTCCTAGACTTAGCTTCCTCAAGAAACATGAGCAGACCCATGGAGATCATATGCCGTTTCGGTGCGAATTTTGCTCGAGACTTTTTAAACATAAGAGATCACGTGATCGGCACATCAAACTTCACACAGGGGACAAGAAGTATAGATGTACCCACTGCGAAGCCGCTTTCTCCAGAAGcGACCACCTGAAAATTCACATGAAAACCCACGACACTCAAAAACCTTTCCAGTGTACAATATGCAATCGTGGGTACAACACTGCAGCCGCTTTAACTTCTCACATGCAGAACCACAAAAGACAGCGACCAGAAACACCTTCTGGCTCTGCAGGTGGAGGAAGCATCAGCAACAGCGGGAAAACGCCTGGAAATGCTAGTGAAGAAAGTGTTTCCAGTCCTGATAGTTTCCACTGTACGCAGTGTGGAGATACTTTCAAAAAGCAAGATCATCTGCAGACTCACATACTGAACATACATACTTCAAACCTGATATCTCCGGAGGAATCGTCTCGCAAAAATGTCTTACTTACCATACCTGAACAAATTTTACCCCAACTTACCCCAAAATTGGCTTGCATTTATTGCACTAAAGATAGTTTTACAACTATGGAACAACTTCAGCTCCATGTACAAGCCATGCACAGTTCTATCCTCAATGGCGAAATTCGAGAATATTCCATCGGTCGCCAGACTGCAACTTCGTCCCCCCACCATTTAATGACACCACCCCCTGCCTTGATATCCGGGAATGGTCACTTATCAAACTCTTCTCTTTATTCTTGTGATATGTGCACCATGAGATTTCCAACCCTTCACCGGCTGAGAAAACATGCTCTTACCGTCCATAGAAATAGTGATTTCAGTCACCAGAAAGAAGGAAATGATTCTGTGCAACAGAGTCCACTTGTTTGTGTGCAATGTGCTTTGCCTTTTCATTCGTCCACTGCATTCACTGAACATTATTTAATGGTACATGGTGGAAGCAGTCCTTCTTTATCAGCTGTTTCTCCCGTTCCTGAACAAGTTAAGCCAACTGATTTGAGCCGAAAGACACCAAGATCTAGTTCTGGAGACAGAAAATCTAAAAGACTTTGTGTAACCGACGATGGATCTAGATTAGATTTGATGACTCCAAATCCATCAACTGGACAGTATGATTACCCTAGTATGTTTCTTTGCAATCAATGTGACGCAGCTCTACCAGATTTTGAGTCTTTTAGGACTCATCTTAAATCACATTTGGATCAAACTGGTGGAGTGAGATCCTTTTTACAAACTAGTGGGGTTAGTTTGCTAGACGCCTTTCAACAAGAAAGTCTTAAACTACAAAATAATTGCGTTTGTCCTCATTGCGGAGCAACCTTCAAAGATCTAATTTCTTGTGAGCAACACATTTATGCTCATTTTCTTTCCACAGCTGTTGAATATGGTTGCCAGAGCTGTCTTAAAATGTTCTCCAAACCTGATGAACTACAAAAGCATTTAATGGATATCCATGCTCATCATCTTTATAGATGTTCTCTTTGTAAAGAAATGTTTGACTCCAAAGTGGCAATTCAAGTTCATTTCGCTGTTAAACATAGCAATGAATGTAAGTTATACCGGTGTACAGCGTGCCCCAATTCGGTGTCCATGTTTCATACAGAATTAGAGTTTAGTTTACACGTTCGTACTGTACACGGCGCTCATGCGTTGTTATCAGCTCTTCAATCGCATTCCAAAACTTTGAGATGTATGTTTTGTCGTCAAGTCTTCGGATCTGATTTAGAAATGCAGTTTCATTTAGCAACTCATACGAAACAGTTTCGCTGCCCTATCTGCTCTGAAAGCTTCCAGATTGAGTTTCTTCTAGACCGACACATTCAGACTTACCACAACAATGGAAGAAATATCAACGGTGAAACCGACGATAACGCCGATGTAGAGAAATCCGTAAAGAAATCTTCAAACTCTCCACAACAAGTCGGAAAAACTCATCCTTCCCCAGGAAGAACTTCCCAAAAATCGTCATCAggtgaaaataataatgtgaagaAACAGCATGATGTGTCTCAACTAAACAACTGTGATATTTGCGAGCGTAATGACTTCAGCAACGAAAATGAATTAGTAGCTCATCGAAAATTGGCCCACCATTCAAGAAGCAACACCAAAAATGGTGTTGTCAGTCTGCATTGTGCATATTGCAACGAAAACTGCAAGACCCGTACAGAGcttgaaaatcatatgaaaagtCATTCTCAAAGCAGTGGTGTGACGGGTAAACATAAATGCAATATATGTGATGAAATTTGTCCATCAGCTGTTTTATTAGCTGAACATAAATTAACCCACTGCAAAGTAATATCAGGCAACTGTTGCACTCAATGTAAAGCAAGCCTAAATAGTGAAGAACAATTTTATTCCCATTTGGTTCAGCATAGCAACAATAATAACAACAGTAACAACCAAAAATCCAAAACACAAATTGCTTTACCTACTTCATGTGTGATATGTCGACAAACATTAATTTCAGATGTGGaagttcgaatccactcacaaTTCCACCTACGGAACACCATGCAGCAAACTGAATATCAATGTTCTGTATGCTTTAAAAATGTTGATCTGCAAAACACAATATTTACCAAAGGCAATTATATATGCTCTGAATGTTATTCTTTACCATCTGATATTCAGCCGCGTAGTTTTCACTGTACTGAATGTCAATTTTCATTTGAGAGCAGTTTAGCTCTAGAACAGCATATGGATTCGACTCACAGTAAAACCTACACTTGTATTAAATGCCAAGCATCTTTCGAAAATGAAAGAGATGTACAGATCCACGTCACAACTCACCTTATGTCAGAGGGTAGCAACCACGAATGTCACTTATGTCGAAGATTATTTTCAAGTCCGATGAAACTTCAAGCCCATTTAATTGAACATACCTTCGCTGGATGTGGTGGTTTTACTTGTTATTTATGTTCAGCTGTTTTCACAGGCTCTCAAGGActtcaaaatcatattattgaccATGGTTTAGCTGCAAGACCCTACGATTGCCCACAATGCAGCATGAAATTTTTCTTCCGAGCGGAATTAGACAATCATAGTTACAGCCACCTTGGTCGTAGCTCAAGATCTTCAACCGAAGCTGACTTACCTTTACTAAGTCCAAAAGCATACTACATATCCGTTAACGGAAAATTTGACCCCTCTAAAAATGGAGAGCTAGCCAAATTTTATGTCAAAGATCAGAAAACTAAAAAAGGAAATAAAAATGATGGAACTGAGGTACAaaaccaaaataataatttagaaaatgacaGTGAAACTGAAGATAAATTATTTGTGAAAGAAGAACCAAAAGATGATACAGAAGAAGGAAAAGATGAGTTCGTTGATTACTCTACAACATCAACCAAATTTAAAAACGAACATAATCCTGGGGGAGAAAGCTCAGCATTTGAAAGTGGTGAGGTTTCTAATGTTACTAGTGATTAA
- Protein Sequence
- MNPVEALGTEQGSSYRSETPEDPQTSPAPSSCATPNSSTDLPDAELSFTVGITEATPYACQFCEKAFPRLSFLKKHEQTHGDHMPFRCEFCSRLFKHKRSRDRHIKLHTGDKKYRCTHCEAAFSRSDHLKIHMKTHDTQKPFQCTICNRGYNTAAALTSHMQNHKRQRPETPSGSAGGGSISNSGKTPGNASEESVSSPDSFHCTQCGDTFKKQDHLQTHILNIHTSNLISPEESSRKNVLLTIPEQILPQLTPKLACIYCTKDSFTTMEQLQLHVQAMHSSILNGEIREYSIGRQTATSSPHHLMTPPPALISGNGHLSNSSLYSCDMCTMRFPTLHRLRKHALTVHRNSDFSHQKEGNDSVQQSPLVCVQCALPFHSSTAFTEHYLMVHGGSSPSLSAVSPVPEQVKPTDLSRKTPRSSSGDRKSKRLCVTDDGSRLDLMTPNPSTGQYDYPSMFLCNQCDAALPDFESFRTHLKSHLDQTGGVRSFLQTSGVSLLDAFQQESLKLQNNCVCPHCGATFKDLISCEQHIYAHFLSTAVEYGCQSCLKMFSKPDELQKHLMDIHAHHLYRCSLCKEMFDSKVAIQVHFAVKHSNECKLYRCTACPNSVSMFHTELEFSLHVRTVHGAHALLSALQSHSKTLRCMFCRQVFGSDLEMQFHLATHTKQFRCPICSESFQIEFLLDRHIQTYHNNGRNINGETDDNADVEKSVKKSSNSPQQVGKTHPSPGRTSQKSSSGENNNVKKQHDVSQLNNCDICERNDFSNENELVAHRKLAHHSRSNTKNGVVSLHCAYCNENCKTRTELENHMKSHSQSSGVTGKHKCNICDEICPSAVLLAEHKLTHCKVISGNCCTQCKASLNSEEQFYSHLVQHSNNNNNSNNQKSKTQIALPTSCVICRQTLISDVEVRIHSQFHLRNTMQQTEYQCSVCFKNVDLQNTIFTKGNYICSECYSLPSDIQPRSFHCTECQFSFESSLALEQHMDSTHSKTYTCIKCQASFENERDVQIHVTTHLMSEGSNHECHLCRRLFSSPMKLQAHLIEHTFAGCGGFTCYLCSAVFTGSQGLQNHIIDHGLAARPYDCPQCSMKFFFRAELDNHSYSHLGRSSRSSTEADLPLLSPKAYYISVNGKFDPSKNGELAKFYVKDQKTKKGNKNDGTEVQNQNNNLENDSETEDKLFVKEEPKDDTEEGKDEFVDYSTTSTKFKNEHNPGGESSAFESGEVSNVTSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00029595; iTF_01226100; iTF_01275680;
- 90% Identity
- -
- 80% Identity
- -