Basic Information

Insect: Agonum fuliginosum
Gene Symbol: L
Assembly: GCA_947534325.1
Location: OX384030.1:23047697-23067193[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 2.5e-05 0.0035 19.1 1.1 1 23 79 101 79 101 0.98

2 21 0.32 45 6.2 5.9 1 23 107 129 107 129 0.98

3 21 1.6e-06 0.00023 22.9 4.3 1 23 135 157 135 157 0.99

4 21 2.7e-05 0.0038 19.0 0.2 1 23 163 185 163 185 0.98

5 21 0.0019 0.26 13.3 4.7 1 23 221 244 221 244 0.95

6 21 0.0082 1.2 11.2 2.4 1 23 344 367 344 367 0.96

7 21 0.68 96 5.2 0.1 2 23 388 410 387 410 0.94

8 21 0.14 19 7.4 0.2 3 23 479 499 478 499 0.98

9 21 0.13 18 7.5 2.9 2 23 533 554 532 554 0.90

10 21 0.0065 0.92 11.5 0.1 3 23 564 585 562 585 0.93

11 21 0.031 4.4 9.4 0.3 1 23 590 613 590 613 0.92

12 21 0.00094 0.13 14.2 0.5 1 23 688 711 688 711 0.98

13 21 3.8 5.4e+02 2.8 0.6 3 23 776 798 775 799 0.85

14 21 0.0029 0.41 12.6 4.6 2 23 812 833 811 833 0.96

15 21 0.0062 0.88 11.6 0.5 1 23 843 865 843 865 0.98

16 21 2.3 3.3e+02 3.5 2.1 3 23 874 894 873 894 0.94

17 21 0.00085 0.12 14.3 1.1 1 23 982 1005 982 1005 0.97

18 21 0.012 1.6 10.8 0.3 1 23 1009 1031 1009 1031 0.98

19 21 0.022 3 9.9 2.0 1 23 1039 1061 1039 1061 0.96

20 21 0.015 2.1 10.4 0.1 1 23 1069 1091 1069 1091 0.97

21 21 0.072 10 8.3 0.6 1 23 1098 1120 1098 1120 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	2.5e-05	0.0035	19.1	1.1	1	23	79	101	79	101	0.98
2	21	0.32	45	6.2	5.9	1	23	107	129	107	129	0.98
3	21	1.6e-06	0.00023	22.9	4.3	1	23	135	157	135	157	0.99
4	21	2.7e-05	0.0038	19.0	0.2	1	23	163	185	163	185	0.98
5	21	0.0019	0.26	13.3	4.7	1	23	221	244	221	244	0.95
6	21	0.0082	1.2	11.2	2.4	1	23	344	367	344	367	0.96
7	21	0.68	96	5.2	0.1	2	23	388	410	387	410	0.94
8	21	0.14	19	7.4	0.2	3	23	479	499	478	499	0.98
9	21	0.13	18	7.5	2.9	2	23	533	554	532	554	0.90
10	21	0.0065	0.92	11.5	0.1	3	23	564	585	562	585	0.93
11	21	0.031	4.4	9.4	0.3	1	23	590	613	590	613	0.92
12	21	0.00094	0.13	14.2	0.5	1	23	688	711	688	711	0.98
13	21	3.8	5.4e+02	2.8	0.6	3	23	776	798	775	799	0.85
14	21	0.0029	0.41	12.6	4.6	2	23	812	833	811	833	0.96
15	21	0.0062	0.88	11.6	0.5	1	23	843	865	843	865	0.98
16	21	2.3	3.3e+02	3.5	2.1	3	23	874	894	873	894	0.94
17	21	0.00085	0.12	14.3	1.1	1	23	982	1005	982	1005	0.97
18	21	0.012	1.6	10.8	0.3	1	23	1009	1031	1009	1031	0.98
19	21	0.022	3	9.9	2.0	1	23	1039	1061	1039	1061	0.96
20	21	0.015	2.1	10.4	0.1	1	23	1069	1091	1069	1091	0.97
21	21	0.072	10	8.3	0.6	1	23	1098	1120	1098	1120	0.94

Sequence Information

Coding Sequence: ATGGACATTCAAGAAAGCAAAACTGTGTTGCAAAGTGCCCAAAAGTGTGGGACAAAGTACTTTGTTGCACACTTAGAAGCTCTGGGTACCGATCACGGCAGCAGCTCCCGTTCAGAGACTCCAGAGGATCCTCAGACGTCTCCGACGCCGTCGTCTTGTGCGACGCCGAATTCCAGCACCGATCTTCCGGACGCAGAACTCAGCTTCACCATCGGCATCACGGAAGCGACCCCATACGCCTGTCAGTTCTGTGACAAGGCGTTTCCTAGACTCAGTTTCCTCAAGAAACACGAGCAGACTCATGGAGATCATATGCCGTTTCGTTGCGAATTTTGCTCGAGACTTTTCAAGCACAAGAGATCTCGTGATCGTCACATTAAACTCCACACCGGGGATAAAAAGTATAGATGCACCCACTGTGAAGCAGCCTTTTCCAGAAGTGACCACCTGAAGATCCACATGAAAACCCACGATACCCAGAAACCGTTTCAATGTACGGTCTGCAACCGAGGTTACAATACTGCAGCGGCTTTAACATCTCACATGCAGAACCACAAGAAACAGCGACCAGAAACGCCTTCCGGAGCTGCTGGTGTAGGGAGCAACATTGCGAAAAATCACGGAAATGTCAGCGAGGAAAATGTTTCCAGTCCTGATAGTTTTCATTGTTCGCAGTGTGGCGACACCTTCAAGAAACAGGATCACCTTCAGACGCACATCCTGAACACGCATACTTCGAATTTGCTGTCCCCCGATGAATCATCGCGCAAAAGCATCGCTCTCTCAATTTCGGAACAAATTCTGCCGCAACTAACCCCAAAACTAGCGTGTATATACTGCACAAAAGACAGTTTCACAACCATGGAGCAACTACAACTGCATGTTCAAGCCATGCACAGCTCAATTCTAAACGGCGAACTTCGCGAATTTTCTCTCGGTCGCCAAACATCAACTTCCTCTCCCCATCACTTAATGACTCCACCTCCAGCTTTAATTTCTGGAAATGGTCATTTGACAACTTCTTCGCTGTATTCTTGCGATATGTGCACGATGAGATTTCCGACTCTTCACCGATTGAGAAAACATTCTTTAACCGTCCATAGGAATTGCGAGTTTTCGCATCAGAAAGAAATGAGTGATTCTGTTCAACAAAGTCCACTTGTATGCGTTCAATGCGCCTTGCCTTTTCATACGTCCGCTGCTTTTACTGAACATTATTTGATGGTCCATGGCGGGAGCAGTCCTTCTTTATCGGCTGCTTCTCCCGTTCCAGAACAAGTAAAACCTACTGATCTTAGCCGAAAGATTCCTAGATCTGGGTCAGAAGACAGAAAATCTAAAAGATTGTGCGTTAATGAAGATGGCGCATCTAGACTGGACTTGATGACTTCGAATGCAAGTACTGGACAATATGATTATCCTAGTATGTTGTTGTGTAATCAATGTGACGCTGCTTTACCGGATTTTGAATCTTTCCGGACTCATCTAAAATCGCATTTAGAACAAGCTGGCGGTGTGAGATCTTTTTTACAGACTAGTGGGTCTAGTTTATTGGACGCATTTCAACAAGAAAGCCTTAAGCTTCAAAATAATTGTATTTGCCCTCATTGCGGGGCTACTTTTAAAGATCTTGTTTCTTGCGAACAACATATTTATGCTCATTTTCTGTCAACAGCTGTTGAATATGGTTGTCAAAGTTGTCTGAAGATGTTCCCTAAACCTGATGAGCTTCAAAAACATTTGATGGATATTCATGCCCATCATCTTTATCGGTGTTCTTTGTGTAAAGAAATGTTCGATTCTAAAGTAGCAATTCAAGTTCATTTTGCTGTGAAACACAGCAATGAATGTAAATTGTATCGATGTACAGCGTGTCCCAATTCAGTGTCAATGTTTCATACAGAATTAGAATTTAGTTTACATGTCCGTACTGTGCATGGTGCCCATGCTTTGTTATCAGCACTTCAATCACATTCCAAAACTCTGAGGTGTATGTTTTGCCGACAAGTCTTCGGATCTGATTTGGAAATGCAGTTTCATTTAGCTACTCATACAAAACAGTTTCGTTGCCCGATATGTTCTGAGAGTTTTCAGATTGAATTTCTTCTAGATAGACACATGCAGACTTATCACAATAATACTAGAACCATTAACGGTGAAAACGATGACAGCGTCGACGGCGAGAAGTCTATAAAGAAATCTTCGTCCAATTCTCCACATCAAGTCGGAAAAACTCATTCATCACCGGGAAGAACTTCTCAAAAGTCTTCTTCAGGTGAAAACAACAACGTGAAGAAACAACATGAAGTGTCTCAATTAAACAACTGTGATATCTGTGAACGAAACGATTTTAGTAACGAAACTGAGTTAGTAGCTCACAGAAAACTGGTTCATCACACAAGAAACAACACTAAAAATGGTGTAGTTAGTCTGCATTGCGCGTATTGTAACGAAAACTGCAAAACGCGCACTGAACTAGAAAACCACATGAAGAGCCATTCGCAAAGTAGCGGAGTTTCCGGTAAACACAAATGTAATATTTGCGATGAGATTTGTCCGTCGGCTATATTATTAGCAGAACATAAATTAACGCATTGTAAAGTTATATCAGGCAATTGTTGCACTCAATGCAAAGCGAGTTTAAGTACCGAAGAACAATTTTATTCGCATTTGGTGCAACACAGTAATAATAACAATAATGGAAACACACAAAAATCCAAAAATCAAATAGCATTACCTACTCCTTGTGTGATTTGTCGTCAAACTTTAATTTCCGATGTTGAAGTCCGAATTCATTCTCAATTTCACTTAAGAAATACTATGCAACAAGCTGAATATCAATGTTCTGTGTGTTTTAAAATAGTTGATGTGCAAAATGTAATAATCACCAAAGGTACTTATCTATGTTCTGAATGTTATTCTTTACCGAATGATTCGCGCAATTTTCATTGTACTGAATGTCAGTTTACGTTTGAGAGCAGTTTGGCTTTAGAACAGCACATGGATACTGCTCATAGCAAAACGTACACTTGTGTTAAATGTCAAGCAACTTTTGACAACGAACGAGATGTACAAATACATGTTACAACCCACTTAATGTCGGAAGGTAGCAACCATGAATGTCATTTGTGTCGAAGACTGTTTGCAAGTCCAATGAAACTTCAATCTCATTTAATTGAACACACATTTGCTGGATGTGGTGGATTTACTTGCTACTTGTGTTCAGCTGTATTTACTGGCGCACAAGGTCTTCAAAGTCACATTATAGAGCATGGTTTAGCTGCCAGGCCTTACGATTGCCCTCAGTGTAACCTAAAATTCTTCTTCAGGGCTGAACTAGATAATCACGGCTACAGTCACTTAGGCCGTAGTTCCAGACCATCAACAGAAGTTGATGTTTCTCTTTTAAGTCCAAAAACTTATTATGTATCTGTCAACGGTAAATTCGATCCATCGAAAAATGGAGAATTGTCAAAATATTATATAAAAGACCACAAACCCAAAAAAGGAGTTAAAACCGATGAAATTGAAGTACAAAACCAAAAAAGTAGCCCAAGCGAAACTGACGAAAAACCTATTGTCAAAGAAGAACCGAAAGATGAAGCAGAAGGTAGAAAAGAAGAGTATGTGGATGTGGATTTTCCTGCAACTTCGACTAAATTTAAAAATGAACAAGGTTCTGTAAGAGAAAGCACGACACATGAAAGCGGTGAGATTCAAAATGTTACTAGCGATTAA
Protein Sequence: MDIQESKTVLQSAQKCGTKYFVAHLEALGTDHGSSSRSETPEDPQTSPTPSSCATPNSSTDLPDAELSFTIGITEATPYACQFCDKAFPRLSFLKKHEQTHGDHMPFRCEFCSRLFKHKRSRDRHIKLHTGDKKYRCTHCEAAFSRSDHLKIHMKTHDTQKPFQCTVCNRGYNTAAALTSHMQNHKKQRPETPSGAAGVGSNIAKNHGNVSEENVSSPDSFHCSQCGDTFKKQDHLQTHILNTHTSNLLSPDESSRKSIALSISEQILPQLTPKLACIYCTKDSFTTMEQLQLHVQAMHSSILNGELREFSLGRQTSTSSPHHLMTPPPALISGNGHLTTSSLYSCDMCTMRFPTLHRLRKHSLTVHRNCEFSHQKEMSDSVQQSPLVCVQCALPFHTSAAFTEHYLMVHGGSSPSLSAASPVPEQVKPTDLSRKIPRSGSEDRKSKRLCVNEDGASRLDLMTSNASTGQYDYPSMLLCNQCDAALPDFESFRTHLKSHLEQAGGVRSFLQTSGSSLLDAFQQESLKLQNNCICPHCGATFKDLVSCEQHIYAHFLSTAVEYGCQSCLKMFPKPDELQKHLMDIHAHHLYRCSLCKEMFDSKVAIQVHFAVKHSNECKLYRCTACPNSVSMFHTELEFSLHVRTVHGAHALLSALQSHSKTLRCMFCRQVFGSDLEMQFHLATHTKQFRCPICSESFQIEFLLDRHMQTYHNNTRTINGENDDSVDGEKSIKKSSSNSPHQVGKTHSSPGRTSQKSSSGENNNVKKQHEVSQLNNCDICERNDFSNETELVAHRKLVHHTRNNTKNGVVSLHCAYCNENCKTRTELENHMKSHSQSSGVSGKHKCNICDEICPSAILLAEHKLTHCKVISGNCCTQCKASLSTEEQFYSHLVQHSNNNNNGNTQKSKNQIALPTPCVICRQTLISDVEVRIHSQFHLRNTMQQAEYQCSVCFKIVDVQNVIITKGTYLCSECYSLPNDSRNFHCTECQFTFESSLALEQHMDTAHSKTYTCVKCQATFDNERDVQIHVTTHLMSEGSNHECHLCRRLFASPMKLQSHLIEHTFAGCGGFTCYLCSAVFTGAQGLQSHIIEHGLAARPYDCPQCNLKFFFRAELDNHGYSHLGRSSRPSTEVDVSLLSPKTYYVSVNGKFDPSKNGELSKYYIKDHKPKKGVKTDEIEVQNQKSSPSETDEKPIVKEEPKDEAEGRKEEYVDVDFPATSTKFKNEQGSVRESTTHESGEIQNVTSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00470282;
90% Identity: -
80% Identity: -