Dqua005812.1
Basic Information
- Insect
- Dromius quadrimaculatus
- Gene Symbol
- Hr39
- Assembly
- GCA_963989225.1
- Location
- OZ022324.1:61350794-61362531[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.53 7.6e+03 -2.1 5.3 45 120 195 272 122 310 0.61 2 4 1.1e-09 1.5e-05 26.6 0.0 1 74 416 490 416 502 0.80 3 4 0.034 4.8e+02 1.9 0.0 91 139 485 532 474 556 0.71 4 4 4.5e-74 6.4e-70 238.6 0.1 204 408 554 753 539 753 0.97
Sequence Information
- Coding Sequence
- ATGGCCGAGATGCGTTCGCCGAACGTATCAATCACTTCAATCAACGTGGAGCACCCAGCGTACTCCACTGCAGGCGTCACCACCTATTACAACGGCACGACGCCCACGTCCAATGCGAACACGAACGTCCTTAATGAAGGACCTGGTGCTAACATGACGGAACGCCAAGAAAGAGACAGAGATAGGGAGCACGGTGATAGTGGGTCCGATGCGGAAGTTGCGCAAATTGACTTTCAAAGGGTAACGATGAGGACGGAGAAGAAAGACGTGCCAAGACCCATGAGCTGGGAGGGGGAACTCTCTGATGGTGGAGCCGACGCCGACATGTGCGTCGACGATGACAGCATCCTCCCCGAAAACCTATCCTTATCCACTAAGCCTCTTCCCCCTGTACAAGATAGTCCAATCCTTCGTTTAAAGCAACCCTCCGCGCCAACCAGCAGCTATTCTCTTCATTCCACGCCAGGAAGTAGTCCTCTTTTGGGGCAAAGGCATTCCATTCCCATCCTGCACAAAGCGCTGAACGTTCCAGCGACACCGAGTCCAGACAGTGCTATTCATTCGGCGTATAGTGTCTTCAGCTCGCCGAGTCAATCGCCCTTAACACAAAGACATGTGACGTTGACGCCATCTTTAAGTAGGAATAATAGTGATGCGTCGCATTCGAGTTGTTGTAGCTATAGTTCGGTGTCAGTTAGTGTGAGCCCCACGCAGCAGTTCAGCCCTACGCATTCGCCTGTGCAGGGAAGACATGTCCACCAACTTCACAGCAGCCCGCTGCACCACAACGTCATTTACCGAAACATTCAAGAAGCTGCTGAACATAGTGCCATATACGTGCGGCAGCAGCAACAGCAAGCGCAGGCCGCACAAGTCTTAGCAGACCAAGAACTGGGTAATGCTGTTAATGATATATCGGTAGGACATGAATTAGGAAATGATACTGGGCAGCAAGATGAACAAGAGGATAAAACAGGAATAGCGAATGCATTGCCTACAGGACCTGGTATATCAAGGCAGCAGCTCATTAAcagTCCATGTCCTATTTGCGGAGATAAGATCTCCGGCTTCCATTACGGCATCTTCAGTTGCGAATCCTGTAAGGGTTTCTTCAAGCGGACAGTacaaaatcgaaaaaattacgTTTGTCTAAGAGGTTCTATCTGTCCTGTCACAGTCGCTACAAGAAAAAAGTGCCCGGCTTGCCGGTTCAACAAATGTCTAAAATGTGGCATGAAACTAGAAGCGATTCGAGAAGATCGCACTCGAGGCGGTCGCTCTACCTACCAGTGCTCATATACTTTACCTGCATCGCTAATGGCCCATCCGGATCTTCGAGCTAGCTGTACGGATCTTCGGCAGACCTTAGTGGGTGACCAACCGCCTGCTATGGTCAAATTAGAACCCAACGATTCGGCATTGCTAACAGGACTATCAAAACGATCTGGAAATTCTACACCGCCTAGACATAGTGTGCCACCGCTGTTACAGGAAATAATGGATGTGGAACATCTTTGGCACTACACCGACGGTGAGCTCACAAAGCTTCACCAAACCTCCGCTGGACTGAGTAAATCTCCAGGAAACAATGCAGCAACTGCTGGAATCAGTTTATCCACGCATCCGCTATTAGCCAATACGGGACTAGCTAGCTCAGCAGACACCAATCCTgattttgttgcaaatttatgCAATATTGCTGATCACAGATTGTACAAGATTGTTAAGTGGTGTAAAAGTTTGccacttttcaaaaatatttcaATCGATGATCAAATTTGCCTTCTCATTAATTCGTGGTGcgaattgttattattttcatgttgtTTTCGATCCATGTCTACGCCAGGAGAAATCAGgGTATCATTAGGGAAGAGCATCACCTTAGCGCAAGCACGTGATATGGGCCTTCAGGCTTGCATAGAGCGCATGCTCAACTTTACTGATCATTTACGCCGTTTACGAGTCGACCGATACGAGTACGTTGCTATGAAAGTAATCGTACTTCTCACTTCTGATACTAGCGAGTTACGTGAAGCCGAAAAAGTTAGAGCTTCGCAAGAAAAAGCGCTGCAAGCTTTACAAGGCTATACGCTGAACCATTATCCTGATATTCCTGCTAAATTTGGGGAGCTTTTATTACGAATCCCAGAGTTGCAACGGACTTGTCAGGTGGGAAAAGAAATGTTGACTATAAAATCAAAGGAGGGCGAAGGGCCAAGCTTCAACCTCCTAATGGAGCTTCTCCGAGGGGACCACTAG
- Protein Sequence
- MAEMRSPNVSITSINVEHPAYSTAGVTTYYNGTTPTSNANTNVLNEGPGANMTERQERDRDREHGDSGSDAEVAQIDFQRVTMRTEKKDVPRPMSWEGELSDGGADADMCVDDDSILPENLSLSTKPLPPVQDSPILRLKQPSAPTSSYSLHSTPGSSPLLGQRHSIPILHKALNVPATPSPDSAIHSAYSVFSSPSQSPLTQRHVTLTPSLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPVQGRHVHQLHSSPLHHNVIYRNIQEAAEHSAIYVRQQQQQAQAAQVLADQELGNAVNDISVGHELGNDTGQQDEQEDKTGIANALPTGPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGSICPVTVATRKKCPACRFNKCLKCGMKLEAIREDRTRGGRSTYQCSYTLPASLMAHPDLRASCTDLRQTLVGDQPPAMVKLEPNDSALLTGLSKRSGNSTPPRHSVPPLLQEIMDVEHLWHYTDGELTKLHQTSAGLSKSPGNNAATAGISLSTHPLLANTGLASSADTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLAQARDMGLQACIERMLNFTDHLRRLRVDRYEYVAMKVIVLLTSDTSELREAEKVRASQEKALQALQGYTLNHYPDIPAKFGELLLRIPELQRTCQVGKEMLTIKSKEGEGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00470043; iTF_01275479; iTF_01275319; iTF_00028792; iTF_00029409; iTF_01104829; iTF_01104417; iTF_00768868; iTF_00768336; iTF_00766585; iTF_00767291; iTF_01225725; iTF_01225914;
- 90% Identity
- iTF_00470043;
- 80% Identity
- iTF_00470043;