Aful043475.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agonum fuliginosum
Gene Symbol
Hr39
Assembly
GCA_947534325.1
Location
OX384033.1:4500052-4511083[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.14 1.8e+03 -0.5 3.0 45 110 173 242 94 290 0.65
2 3 5.7e-09 7.4e-05 23.8 0.4 1 57 391 447 391 531 0.69
3 3 8.9e-74 1.1e-69 237.3 0.1 204 408 532 731 514 731 0.97

Sequence Information

Coding Sequence
ATGGCCGAGATGCGGTCCCCGAACGTGTCGGTCACCCCGATCAACGTGGAGCACGCGGCGTACCCGGCCGCCGGCGTCTTCTTCAACGGCTCGACACCTGGTGCAGACATGACGCCCACGCTAGACAGAGACAGTGGCTCCGACGCCGAGGTCGCGCAGATCGACTTCCAGAGGGTCAACATGCGCACCGAGAAGAAACACGATGTGCCCCGGCCCATGAGCTGGGAGGGCGAACTCTCTGATGGTGGCGCAGACGCCGACATGTGCGTAGACGACGACAGCCACGGTCCACAAAACCTCTCAACCAGCAAACCCCTCCCTCCGGTTCAAGACAGCCCGATCCTCCGCCTCAAGCAGCCCTCGGGGCCCCCCAGCAGCTACTCCCTCCACTCGACGCCGGGAAGTTCCCCGCTGTTGGGGCAGCGCCACTCGATCCCGGTCCTCCACAAGGCGCTGAACGTACCCGCTACCCCGAGCCCGGACTCGGCTATACACTCGGCGTACAGCGTGTTCAGCTCGCCCAGCCAATCACCGCTCACGCAGCGACACGTCACGTTGACACCCTCGCTCAGCAGGAATAATAGCGATGCCTCGCATTCGAGTTGCTGTAGCTATAGCTCCGTGTCCGTGTCGGTTAGCCCCACGCAGCAGTTCTCGCCCACGCATTCGCCCGTCCAGGGAAGACACGTCCACCAGCTCCACGGCAGCCCGCTCCACCACAACGTGATCTACCGCAACATCCAAGAAGTCGCTGAGCACAGTGCCATATACGTGCGGCAGCAACAGCAGCAGGTGTTAGCAGCGGCAGCAGCTGGCGACCAAGAGCTCGTGAACAACGCACCTGGTGAACACGAGGCTGCGACCCTCCTAGGACAGCAGGATGAGCAGGAAGACAAGACCGGCATCGCGCATGCGCTGCCTGCTGGGCCTGGCATCTCCAGGCAGCAGCTCATCAACAGTCCAtgtccgatttgcggcgacaaaatctccggtttccattacggcatcttcagttgcgagtcgtgtaaaggattcttcaagcgaacggttcagaaccggaaaaactacgtctgtctacgcggtgccatttgtcctgttacagtcgcaacaaggaaaaagtgtccggcttgtcggtttgacaagtgtctgcaatgcggcatgaaactcgaagCGATTCGAGAAGACCGTACCCGGGGCGGGCGATCAACATACCAGTGCTCCTACACTCTACCAGCATCGCTGATGGCGCATCCGGAACTCCGGGCTAGCAGCACGGACCTGAGACAGACGATGGTCGGTGATCAGGCATCGATCATCAAGCTAGAACCGAACGATCCCGCGAGCTTACTGGCCGGCATTCAAAGGAAGCAGGGGAATGCCACTCCGCCCCGCCACAGCGTACCACCGCTGTTACAGGAAATAATGGACGTGGAGCACCTGTGGCACTACACGGACGGGGAGTTAACGAAGTTGCACCAGACCTCAACGGGCACCGGCAACATGAACAAAACTCCAGGAAGTAACAACGCGTCGGCTGGAATTAGTTTATCCACGCATCCGCTTCTCGCTAACACGGGGTTAGCGAGTTCTGCGGACACCAATCCTGACTTTGTAGCGAATTTGTGCAATATTGCCGACCACCGGTTGTACAAAATCGTCAAGTGGTGTAAGAGTTTGCCGTTGTTTAAGAACATCTCGATTGATGATCAAATATGCCTTTTAATCAACTCATGGTGCGAATTATTATTATTTTCGTGTTGTTTTCGATCAATGTCTACACCAGGAGAAATCCGGGTATCATTAGGAAAAAGCATAAACCTAGCGCAAGCACGTGATATGGGTCTCCAAGCTTGCATCGAGCGCATGCTGAACTTCACCGACCACCTCCGCCGCCTGCGGGTGGACAGATACGAGTACGTGGCGATGAAAGTGATCGTGCTTCTCACCTCCGACACCAGCGAGCTTCGGGAAGCGGAGAAAGTGCGCGCGTCGCAAGAGAAAGCCCTCCAAGCCTTGCAGGGCTACACGCTCACGCACTATCCCGATATTCCTGCCAAGTTCGGAGAGCTTTTGCTGCGGATTCCGGAACTGCAACGAACTTGCCAGGTTGGGAAAGAAATGCTGACGATAAAATCAAAAGAGGGCGAGGGGCCCAGCTTCAACCTCCTGATGGAGCTTCTTCGAGGGGACCACTAG
Protein Sequence
MAEMRSPNVSVTPINVEHAAYPAAGVFFNGSTPGADMTPTLDRDSGSDAEVAQIDFQRVNMRTEKKHDVPRPMSWEGELSDGGADADMCVDDDSHGPQNLSTSKPLPPVQDSPILRLKQPSGPPSSYSLHSTPGSSPLLGQRHSIPVLHKALNVPATPSPDSAIHSAYSVFSSPSQSPLTQRHVTLTPSLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPVQGRHVHQLHGSPLHHNVIYRNIQEVAEHSAIYVRQQQQQVLAAAAAGDQELVNNAPGEHEAATLLGQQDEQEDKTGIAHALPAGPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAICPVTVATRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYTLPASLMAHPELRASSTDLRQTMVGDQASIIKLEPNDPASLLAGIQRKQGNATPPRHSVPPLLQEIMDVEHLWHYTDGELTKLHQTSTGTGNMNKTPGSNNASAGISLSTHPLLANTGLASSADTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSINLAQARDMGLQACIERMLNFTDHLRRLRVDRYEYVAMKVIVLLTSDTSELREAEKVRASQEKALQALQGYTLTHYPDIPAKFGELLLRIPELQRTCQVGKEMLTIKSKEGEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00469692;
90% Identity
iTF_00029409;
80% Identity
iTF_00029409;