Basic Information

Insect: Dorcus parallelipipedus
Gene Symbol: -
Assembly: GCA_958336345.1
Location: OY284475.1:8149979-8171108[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 0.68 63 5.7 0.8 3 23 23 44 22 44 0.94

2 33 0.00084 0.077 14.9 2.5 1 23 50 72 50 72 0.98

3 33 0.0084 0.78 11.7 2.0 3 23 80 100 78 100 0.97

4 33 0.0023 0.21 13.5 2.0 1 23 106 128 106 128 0.96

5 33 0.0035 0.32 12.9 1.7 3 23 136 156 134 156 0.96

6 33 6.7e-05 0.0062 18.3 1.5 1 23 162 184 162 184 0.98

7 33 0.51 47 6.2 1.1 1 23 190 212 190 212 0.97

8 33 0.033 3 9.9 0.0 1 23 217 239 217 239 0.98

9 33 0.11 10 8.2 0.9 1 23 268 291 268 291 0.94

10 33 0.00026 0.024 16.5 0.9 1 23 297 319 297 319 0.97

11 33 0.0013 0.12 14.3 4.2 1 23 325 347 325 347 0.97

12 33 0.048 4.4 9.4 2.5 1 23 353 375 353 375 0.96

13 33 0.0058 0.53 12.3 1.3 1 23 381 403 381 403 0.97

14 33 0.00011 0.01 17.6 1.2 1 23 409 431 409 431 0.98

15 33 0.31 29 6.8 1.3 1 23 437 459 437 459 0.98

16 33 0.0019 0.17 13.8 0.1 1 23 464 486 464 486 0.99

17 33 0.032 3 9.9 0.9 1 23 514 537 514 537 0.92

18 33 0.0039 0.36 12.8 3.3 1 23 543 565 543 565 0.98

19 33 4.7e-05 0.0043 18.8 2.7 1 23 571 593 571 593 0.97

20 33 0.00091 0.084 14.8 6.7 1 23 599 621 599 621 0.98

21 33 0.059 5.5 9.1 1.0 1 23 627 649 627 649 0.98

22 33 0.031 2.8 10.0 4.7 1 23 675 697 675 697 0.98

23 33 0.00029 0.027 16.4 2.0 1 23 703 725 703 725 0.99

24 33 0.35 33 6.6 4.5 1 23 731 753 731 753 0.98

25 33 0.047 4.3 9.4 0.6 1 23 770 792 770 792 0.98

26 33 5 4.7e+02 3.0 0.3 1 17 798 814 798 815 0.84

27 33 0.033 3 9.9 4.1 1 23 849 871 849 871 0.98

28 33 8e-07 7.4e-05 24.4 0.8 1 23 877 899 877 899 0.99

29 33 2e-05 0.0019 20.0 2.5 1 23 905 927 905 927 0.98

30 33 1.1e-05 0.00099 20.9 0.2 1 20 933 952 933 955 0.93

31 33 4.2e-05 0.0039 19.0 0.4 1 23 961 983 961 983 0.98

32 33 2.5e-05 0.0023 19.7 1.6 1 23 989 1011 989 1011 0.98

33 33 0.031 2.8 10.0 3.1 1 23 1017 1039 1017 1039 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	0.68	63	5.7	0.8	3	23	23	44	22	44	0.94
2	33	0.00084	0.077	14.9	2.5	1	23	50	72	50	72	0.98
3	33	0.0084	0.78	11.7	2.0	3	23	80	100	78	100	0.97
4	33	0.0023	0.21	13.5	2.0	1	23	106	128	106	128	0.96
5	33	0.0035	0.32	12.9	1.7	3	23	136	156	134	156	0.96
6	33	6.7e-05	0.0062	18.3	1.5	1	23	162	184	162	184	0.98
7	33	0.51	47	6.2	1.1	1	23	190	212	190	212	0.97
8	33	0.033	3	9.9	0.0	1	23	217	239	217	239	0.98
9	33	0.11	10	8.2	0.9	1	23	268	291	268	291	0.94
10	33	0.00026	0.024	16.5	0.9	1	23	297	319	297	319	0.97
11	33	0.0013	0.12	14.3	4.2	1	23	325	347	325	347	0.97
12	33	0.048	4.4	9.4	2.5	1	23	353	375	353	375	0.96
13	33	0.0058	0.53	12.3	1.3	1	23	381	403	381	403	0.97
14	33	0.00011	0.01	17.6	1.2	1	23	409	431	409	431	0.98
15	33	0.31	29	6.8	1.3	1	23	437	459	437	459	0.98
16	33	0.0019	0.17	13.8	0.1	1	23	464	486	464	486	0.99
17	33	0.032	3	9.9	0.9	1	23	514	537	514	537	0.92
18	33	0.0039	0.36	12.8	3.3	1	23	543	565	543	565	0.98
19	33	4.7e-05	0.0043	18.8	2.7	1	23	571	593	571	593	0.97
20	33	0.00091	0.084	14.8	6.7	1	23	599	621	599	621	0.98
21	33	0.059	5.5	9.1	1.0	1	23	627	649	627	649	0.98
22	33	0.031	2.8	10.0	4.7	1	23	675	697	675	697	0.98
23	33	0.00029	0.027	16.4	2.0	1	23	703	725	703	725	0.99
24	33	0.35	33	6.6	4.5	1	23	731	753	731	753	0.98
25	33	0.047	4.3	9.4	0.6	1	23	770	792	770	792	0.98
26	33	5	4.7e+02	3.0	0.3	1	17	798	814	798	815	0.84
27	33	0.033	3	9.9	4.1	1	23	849	871	849	871	0.98
28	33	8e-07	7.4e-05	24.4	0.8	1	23	877	899	877	899	0.99
29	33	2e-05	0.0019	20.0	2.5	1	23	905	927	905	927	0.98
30	33	1.1e-05	0.00099	20.9	0.2	1	20	933	952	933	955	0.93
31	33	4.2e-05	0.0039	19.0	0.4	1	23	961	983	961	983	0.98
32	33	2.5e-05	0.0023	19.7	1.6	1	23	989	1011	989	1011	0.98
33	33	0.031	2.8	10.0	3.1	1	23	1017	1039	1017	1039	0.96

Sequence Information

Coding Sequence: ATGGGGGAGAGGAGATCCAAACCGCCCAAATCCAAATCTAGAAAACCGGGCGAAAGGGAATCCGCATGCCGCGTATGCGGTGCCAAATTCCAATCCCGCAAGCTTACGCGTCAGCACGTGCTGAAGTCACACACCAGCGGCAAGCTGTTCAGCTGTAACCGTTGCGAGCACAAATTTCGGCAACTCGTAAACCTAGAAACGCACGTGTTgacacacaccggcgagaagccgttcggttgcgACTATTGCAATTTTAGATGCCGACGGTCGGGAGCGCTGAAGCTTCACTTGTcaatacacaccgacgagaaaccatTCGCCTGTGATCTTTGCGAATATAAATGCAGACAAGCCTCGCAGTTAAGacagcacaagttaatacaTACCAATGAGAAACCACTCGCCTGTGACCTCTGCGACTATAAATGCCGACTACTCgagaatttgaaacagcacatgttgaaacacaccggtgagaagccgttcagctgtgacgtttgcgattacaaatgtcggcAGCCCGGAAGTTTAAAGAAGCATTTGctaatacacaccgacgagaaacacTACAGGTGCTACGTTTGCAGTTACGAATGCAACGAGGTGGCAGATTTGAAGGTGCACTTTTTAATGCACGACGAGAAACCGTACAAGTGCGAACGTTGCGAATTTGCGGCTGCAACGCCCGAGCTCCTAAAAGGGCATATACGAGGGCACGTCGATGAAGAATCGCACAAGCGCAAGCGACTACGAAAATCTAAACCGCCCAAATCTAAATCTAGAAAACCAGCCGATAGAGAATTCGCATGCCGCATATGCGGTGCCAAATTCCAATCCCGCAAGCTTACGCGTCAGCACGTGCTGAAGTCCCACACCAGCGGCAAGCTGTTCAGCTGTAATCGTTGCGAGCGAAAATTTCGGCAACTCGTAAACCTAGAAACGCACGTGTcgatacacaccggcgagaagccgttctgTTGCGACTATTGCAATTTTAGATGCCGACAGCCGGGAGCGCTGAAGCGCCACttgttaatacacaccggcgagaaaccgttcgccTGTGATCGCTGCGAATATAAATGCAGAGAACCCTCGAAGTTAAAACAGCACAAGTTGATACACACCAACGAGAAACCATACGCCTGCGATCTTTGCGACTACAAATGCCGACtactcggaaatttgaaagagcACTTATTGAAACACACCGGCGAGCAGCCGTTCAGTTGTGgcgtttgcgattataagtgtcgGCAGCCCGGAAGCTTAAAAAAGCATTTGCTAATACACACCGATGAGAAACACTACAGGTGCTACGTTTGCAGTTACGAATGCAACGAGGTCGCAGATTTAAAGGTGCACTTTTTAACGCACGACGAGAAGCCGTACAAGTGCGAACATTGCGAATTTGCGGCTGCAACGCCCGAGCTCCTAAAAGGGCATATACGAGTGCACGTCGATGAAAAGTCGCACAAGCGCAAGCGACTACGAAAATTCCACCCGACGACTGAACGTAAATTTCTGGACGAAAAAGGATTCGCCTGCCGCATATGCGGCTCTAAATTCAAAAAGCGTAAACTCATGCGTCAACACGTCCTGGCGTCACACACCAGCGGCAAGATGTTCAGCTGTAACCTGTGCGAACATAAAACCGTGCATCGCGGAAACTTCGAGGCgcacatgttaacgcacaccggcgaTAAACCGTTTAGTTGTGACTATTGTGATTACAAATGTCGACAGTCGTCAGCTTTGAAACGGCACGTGCttatacacaccggcgagaaaccgttcagttgtgatcactgccattataaatgccgagatcGCGGAGCTTTGACACGCCACATGTCGATACACTCcaacgagaaaccgttcagctgcgatctctgcgattataaaggCCGCGAGCGCAGAGGTTTGTCGCGGCATAAGTTAACGCATATCTTAATACCAGAGAATGGAAAAACACCCGGCGGTAAAAGTGAGCAACTTttaacgcacaccggcgagaagctcTTCAAGTGCGATCATTGTGAACACACGACCAAACTATTCGGATCGTTGAAGAGGCACCTGCTGGTGCATACCGACGAGAGGCCGTTCAAATGTAAGCTGTGCGACTACGCGGCCAGAAGATCGGAGCATTTAAAATCACATGTGCTGACGCACACCGACGATGCGCCGTTTGAATGTACGCTTTGCAGTTACAAGGGCAAAACCTTGAAGAGATTAAGATTGCACATgtGCCGGCACAAGGACGCCCTGGCGCGGCACGCGttgatacacaccggcgagacgCCGTTCAAGTGCgaactttgcgattataagGGCCGGTATCCGGGAAGGTTTAAGGAGCACGTCCTGACGCACATCGCCGAAAGACGCTACAAGTGCACTCTATGCAATTACGCGGCTAAGTTTCCGAGGATGCTCAACAAATCCAGCGAGGCTTCAACCAACGACGCCGCCGCCACCGCCGCCGTCGCCGTCGAATCGAGCTCTGAAAATCAACCGCAGGAGCCCAAGAGGCAATACAGATACTCCTGCAAGTTCTGCAATTACGCGACCAATTACTCGGGGCATTTAAAATACCACGTCTacacgcacaccggcgagaaaccctACGTCTGCCTGGTTTGCGACCGCAGATTCAACCAGCCGTACAATTTGGAGCAGCACCGGCGCACTCACACCGGCGCGAAACCGTTCCAGTGCGAGATATGCGGCGCCAGCTTTCGCCAGGCCCACCACGTGAGAGACCACATGTCGAAGCACACCAGCGAAACACCCTACGTGTGCGAGATTTGCGGGGCGAAATTCAAAAGGGCCGAGTACTTACAGCGGCACATGCCCCggcacaccggcgaaaagcccTTCGAGTGCTCCGTTTGCTCCGCGAAATTCGCGCGGAATTCCTCCCTGCAGCAGCACTTGTTGAGCCACAGCGACGAGAAGCCCTTTCAATGTATGCTCTGCGATAGGACATTCAAGACTCAGAAGACCTTGAAGTGGCACGTCGAGTCGCACACGGGGATGAAACGTTACAAGTGCGACTGGTGCATTTGTAAGTTTCGCTTGAAGTACCAACTGCGGCGCCACATGGTTGCTCACGGCGAAGGTGAAGGGCGTTTGAAGTGCTTTGACTGCGCTTTCGGACTTGACAGCGCAACATAA
Protein Sequence: MGERRSKPPKSKSRKPGERESACRVCGAKFQSRKLTRQHVLKSHTSGKLFSCNRCEHKFRQLVNLETHVLTHTGEKPFGCDYCNFRCRRSGALKLHLSIHTDEKPFACDLCEYKCRQASQLRQHKLIHTNEKPLACDLCDYKCRLLENLKQHMLKHTGEKPFSCDVCDYKCRQPGSLKKHLLIHTDEKHYRCYVCSYECNEVADLKVHFLMHDEKPYKCERCEFAAATPELLKGHIRGHVDEESHKRKRLRKSKPPKSKSRKPADREFACRICGAKFQSRKLTRQHVLKSHTSGKLFSCNRCERKFRQLVNLETHVSIHTGEKPFCCDYCNFRCRQPGALKRHLLIHTGEKPFACDRCEYKCREPSKLKQHKLIHTNEKPYACDLCDYKCRLLGNLKEHLLKHTGEQPFSCGVCDYKCRQPGSLKKHLLIHTDEKHYRCYVCSYECNEVADLKVHFLTHDEKPYKCEHCEFAAATPELLKGHIRVHVDEKSHKRKRLRKFHPTTERKFLDEKGFACRICGSKFKKRKLMRQHVLASHTSGKMFSCNLCEHKTVHRGNFEAHMLTHTGDKPFSCDYCDYKCRQSSALKRHVLIHTGEKPFSCDHCHYKCRDRGALTRHMSIHSNEKPFSCDLCDYKGRERRGLSRHKLTHILIPENGKTPGGKSEQLLTHTGEKLFKCDHCEHTTKLFGSLKRHLLVHTDERPFKCKLCDYAARRSEHLKSHVLTHTDDAPFECTLCSYKGKTLKRLRLHMCRHKDALARHALIHTGETPFKCELCDYKGRYPGRFKEHVLTHIAERRYKCTLCNYAAKFPRMLNKSSEASTNDAAATAAVAVESSSENQPQEPKRQYRYSCKFCNYATNYSGHLKYHVYTHTGEKPYVCLVCDRRFNQPYNLEQHRRTHTGAKPFQCEICGASFRQAHHVRDHMSKHTSETPYVCEICGAKFKRAEYLQRHMPRHTGEKPFECSVCSAKFARNSSLQQHLLSHSDEKPFQCMLCDRTFKTQKTLKWHVESHTGMKRYKCDWCICKFRLKYQLRRHMVAHGEGEGRLKCFDCAFGLDSAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00467119; iTF_00465166; iTF_00465640;
90% Identity: iTF_00467119; iTF_00465166; iTF_00465640;
80% Identity: iTF_00467119;