Basic Information

Insect: Dorcus hopei
Gene Symbol: -
Assembly: GCA_033060865.1
Location: CM065425.1:72469039-72485959[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 32 0.18 19 7.4 0.9 1 23 24 47 24 47 0.94

2 32 0.00074 0.081 14.9 2.5 1 23 53 75 53 75 0.98

3 32 0.0074 0.82 11.7 2.0 3 23 83 103 81 103 0.97

4 32 0.00059 0.065 15.2 1.6 1 23 109 131 109 131 0.96

5 32 0.011 1.2 11.2 1.6 3 23 139 159 137 159 0.96

6 32 7.5e-05 0.0083 18.0 1.8 1 23 165 187 165 187 0.98

7 32 0.44 49 6.1 1.1 1 23 193 215 193 215 0.97

8 32 0.01 1.2 11.3 0.0 1 23 220 242 220 242 0.99

9 32 0.098 11 8.2 0.9 1 23 271 294 271 294 0.94

10 32 0.00022 0.025 16.5 0.9 1 23 300 322 300 322 0.97

11 32 0.00017 0.019 16.9 1.2 1 23 328 350 328 350 0.97

12 32 0.042 4.7 9.4 2.5 1 23 356 378 356 378 0.96

13 32 0.0051 0.56 12.3 1.3 1 23 384 406 384 406 0.97

14 32 9.9e-05 0.011 17.6 1.2 1 23 412 434 412 434 0.98

15 32 0.27 30 6.8 1.3 1 23 440 462 440 462 0.98

16 32 0.01 1.2 11.3 0.0 1 23 467 489 467 489 0.99

17 32 0.028 3.1 9.9 0.9 1 23 517 540 517 540 0.92

18 32 0.0034 0.37 12.8 3.3 1 23 546 568 546 568 0.98

19 32 7.5e-06 0.00083 21.2 3.2 1 23 574 596 574 596 0.98

20 32 0.00079 0.088 14.8 6.7 1 23 602 624 602 624 0.98

21 32 0.052 5.8 9.1 1.0 1 23 630 652 630 652 0.98

22 32 0.027 3 10.0 4.7 1 23 678 700 678 700 0.98

23 32 0.00025 0.028 16.4 2.0 1 23 706 728 706 728 0.99

24 32 0.041 4.5 9.4 0.6 1 23 773 795 773 795 0.98

25 32 8.1 8.9e+02 2.2 0.6 1 9 801 809 801 814 0.85

26 32 0.028 3.2 9.9 4.1 1 23 850 872 850 872 0.98

27 32 3.1e-07 3.4e-05 25.5 0.7 1 23 878 900 878 900 0.99

28 32 1.8e-05 0.002 20.0 2.5 1 23 906 928 906 928 0.98

29 32 2.5e-05 0.0028 19.5 0.4 1 20 934 953 934 956 0.93

30 32 3.7e-05 0.0041 19.0 0.4 1 23 962 984 962 984 0.98

31 32 5.9e-05 0.0065 18.3 1.6 1 23 990 1012 990 1012 0.98

32 32 0.088 9.7 8.4 3.0 1 23 1018 1040 1018 1040 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	32	0.18	19	7.4	0.9	1	23	24	47	24	47	0.94
2	32	0.00074	0.081	14.9	2.5	1	23	53	75	53	75	0.98
3	32	0.0074	0.82	11.7	2.0	3	23	83	103	81	103	0.97
4	32	0.00059	0.065	15.2	1.6	1	23	109	131	109	131	0.96
5	32	0.011	1.2	11.2	1.6	3	23	139	159	137	159	0.96
6	32	7.5e-05	0.0083	18.0	1.8	1	23	165	187	165	187	0.98
7	32	0.44	49	6.1	1.1	1	23	193	215	193	215	0.97
8	32	0.01	1.2	11.3	0.0	1	23	220	242	220	242	0.99
9	32	0.098	11	8.2	0.9	1	23	271	294	271	294	0.94
10	32	0.00022	0.025	16.5	0.9	1	23	300	322	300	322	0.97
11	32	0.00017	0.019	16.9	1.2	1	23	328	350	328	350	0.97
12	32	0.042	4.7	9.4	2.5	1	23	356	378	356	378	0.96
13	32	0.0051	0.56	12.3	1.3	1	23	384	406	384	406	0.97
14	32	9.9e-05	0.011	17.6	1.2	1	23	412	434	412	434	0.98
15	32	0.27	30	6.8	1.3	1	23	440	462	440	462	0.98
16	32	0.01	1.2	11.3	0.0	1	23	467	489	467	489	0.99
17	32	0.028	3.1	9.9	0.9	1	23	517	540	517	540	0.92
18	32	0.0034	0.37	12.8	3.3	1	23	546	568	546	568	0.98
19	32	7.5e-06	0.00083	21.2	3.2	1	23	574	596	574	596	0.98
20	32	0.00079	0.088	14.8	6.7	1	23	602	624	602	624	0.98
21	32	0.052	5.8	9.1	1.0	1	23	630	652	630	652	0.98
22	32	0.027	3	10.0	4.7	1	23	678	700	678	700	0.98
23	32	0.00025	0.028	16.4	2.0	1	23	706	728	706	728	0.99
24	32	0.041	4.5	9.4	0.6	1	23	773	795	773	795	0.98
25	32	8.1	8.9e+02	2.2	0.6	1	9	801	809	801	814	0.85
26	32	0.028	3.2	9.9	4.1	1	23	850	872	850	872	0.98
27	32	3.1e-07	3.4e-05	25.5	0.7	1	23	878	900	878	900	0.99
28	32	1.8e-05	0.002	20.0	2.5	1	23	906	928	906	928	0.98
29	32	2.5e-05	0.0028	19.5	0.4	1	20	934	953	934	956	0.93
30	32	3.7e-05	0.0041	19.0	0.4	1	23	962	984	962	984	0.98
31	32	5.9e-05	0.0065	18.3	1.6	1	23	990	1012	990	1012	0.98
32	32	0.088	9.7	8.4	3.0	1	23	1018	1040	1018	1040	0.95

Sequence Information

Coding Sequence: ATGACCATTCAAGTGCAAGCtctATCCAAGCCGACCAAATCCAAATCTAGAAAACCGGGCGAAAGGGAATTCGCATGCCGCGTATGCGGCGCCAAATTCCAATCCCGCAAGCTTACGCGTCAGCACGTGCTGAAGTCCCACACCAGCGGCAAGCTGTTCAGCTGTAACCGTTGCGAGCACAAATTTCGACAACTCGTAAACCTAGAAACGCACGTGTTgacacacaccggcgagaagccgttcggttgcGACTATTGCAATTTTAGATGCCGACGGTCGGGAGCGCTGAAGCTGCACCTGTcaatacacaccgacgagaagccgttcgctTGTGATGTTTGCGAATATAAATGCAGACAACCCTCGCAGTTAAGacagcacaagttaatacaCACCAATGAGAAACCACTCGCCTGCGACCTTTGCGACTATAAATGCCGACTGCTCgagaatttgaaacagcacttgttgaaacacaccggcgagaagccctTCAGTTGTAGcgtttgcgattacaaatgtcggcAGCCCGGAAGTTTAAAGAAGCATTTGctaatacacaccgacgagaaacacTACAGGTGCTACGTTTGCAGTTACGAATGCAACGAGGTCGCAGATTTGAAGGTGCACTTTTTAATGCACGACGAGAAGCCGTACAAGTGCGAACGTTGCGAATTTGCGGCTGCAACGCCCGAGCTCCTAAAAGGGCATATACGAGTGCACGTCGATGAAAAATCGCACAAGCGCAAGCGACTACAAAAATCCAAACCGCCCAAATCTAAATCTAGAAAACCAGCCGAAAGAGAATTCGCATGCCGCATATGCGGTGCCAAATTCCAATCCCGCAAGCTTACGCGTCAGCACGTGCTGAAGTCCCACACCAGCGGCAAGCTGTTCAGCTGTAATCGTTGCGAGCGAAAATTTCGGCAACTCGTAAACCTAGAAACGCACGTGTcgatacacaccggcgagaagccgttcgctTGCGACTACTGCAATTTTAGGTGTCGACAGCCGGGAGCGCTGAAGCGCCACttgttaatacacaccggcgagaaaccgttcgccTGCGATCGCTGCGAATATAAATGCAGAGAACCCTCAAAGTtaaaacagcacaagttaatacacaccgacgagaaaccatACGCCTGCGATCTTTGCGACTACAAATGCCGACTactcggaaatttgaaagagcACTTATTGAAACACACCGGCGAGCAGCCGTTCAGTTGTGGcgtttgcgattacaaatgtcgccAGCCCGGAAGCTTAAAAAAGCATTTGctaatacacaccgacgagaaacacTACAGGTGCTACGTTTGCAGTTACGAATGCAACGAGGTCGCAGATCTAAAGGTGCACTTTTTAACTCACGATGAGAAGCCGTACAAGTGCGAACGTTGCGAATTTGCGGCTGCAACGCCCGAGCTCCTAAAAGGGCATATACGAGTGCACGTCGATGAGAAATCGTACAAGCGCAAGCGACTACAAAAATTCCACCCGACGACCGAACGTAAATTTCTGGACGAAAAAGGATTCGCCTGCCGCATATGCGGCTCTAAATTCAAAAAGCGTAAACTCATGCGTCAACACGTCCTGGCGTCGCACACCAGCGGCAAGATGTTCAGCTGTAACCTGTGCGAACATAAAACCGTACATCGCGGAAACTTCGAGGCACACATGTTAACACACACCGGCGataaaccgttcagttgtgattactgcgattacaaatgtcggcAGTCGTCAGCTTTGAAGCGGCACATGCttatacacaccggcgagaaaccattcagttgtgatcacTGCCATTATAAATGCCGGGATCGCGGAGCTTTGACGCGCCACATGTCGATACActccgacgagaaaccgttcagctgcgatctctgcgattataaaggCCGTGAGCGCAGAGGTTTGTCGCGGCATAAGTTAACGCATATCTTAATACCAGAGAGTGGAAAATTACCCGGCGGTAAAAATGAGCAACTTTtgacgcacaccggcgagaagcttTTCAAGTGCGACCATTGCGAACACACGACCAAACTATTCGGATCGTTGAAGAGGCACCTGCTGGTGCATACCGACGAGAGGCCGTTCAAATGTAAGCTGTGTGACTACGCGGCCAGAAGATCGGAACATTTAAAATCACATGTGCTGACGCACACCGACGATGCGCCGTTTGAATGTACGCTTTGCAGTTACAAGGGCAAAACCTTGAAGAGATTAAGGTTGCACATgtGCCGGCACAAGGATGCCTTGACGCGGCACACGTTGATACATACCGGCGAGATGCCGTTCAAGTGTgaactttgcgattataagGGCCGGTATCCGGGAAGGTTTAAAGAGCACGTCTTGACGCACATCGCCGAAAGACGCTACAAGTGCACTGTATGCAATTACTCGGCTAAGTTTCCGAGGATTCTCAACAAATCCAGCGAGGTTTCAACCAacgacgccgccgccgccgtcgcCGTCCAATCGAGCTCTGAAAATCAACCGCAGGAGCCCAAGAGGCAGTACAGATACTCCTGCAAGTTCTGCAATTACGCGACCAATTACTCGGGGCATTTAAAATACCACGTCTAcacgcacaccggcgagaaaccctACGTCTGCTTGGTTTGCGACCGCAGATTCAACCAGCCGTACAATTTAGAGCAGCACCAGCGCACTCACACCGGCGCGAAACCGTTTCAGTGCGAGATATGCGGGGCCAGCTTCCGCCAGGCCCACCACGTGAGAGATCACATGTCGAAGCACACCAACGAAACGCCCTACGTGTGCGAGACTTGCGGGGCGAAATTCAAAAGGGCCGAGTACTTACAGCGCCACATGCCCCGgcacaccggcgaaaagccCTTCGAGTGCTCCGTTTGCTCCGCGAAATTCGCGCGGAATTCGTCCCTGCAGCAGCACTTGTTGAGTCACAGCGACGAGAGGCCCTTTCAATGTATGCTTTGCGATCGGAGATTTAAGTCTCAGAAGACTTTGAAGTGGCACGTCGAGTCGCACACGGGGATGAAACGTTACAAGTGTGACTGGTGCATTTGTAAGTTTCGCTTGAAGTACCAACTGCGGCGCCACCTGGTTGCTCACGGCGAAGGTGAAGGGCGTTTGAAGTGCTTCGACTGCGCTTTTGGACTTGACAGCGCAACATAA
Protein Sequence: MTIQVQALSKPTKSKSRKPGEREFACRVCGAKFQSRKLTRQHVLKSHTSGKLFSCNRCEHKFRQLVNLETHVLTHTGEKPFGCDYCNFRCRRSGALKLHLSIHTDEKPFACDVCEYKCRQPSQLRQHKLIHTNEKPLACDLCDYKCRLLENLKQHLLKHTGEKPFSCSVCDYKCRQPGSLKKHLLIHTDEKHYRCYVCSYECNEVADLKVHFLMHDEKPYKCERCEFAAATPELLKGHIRVHVDEKSHKRKRLQKSKPPKSKSRKPAEREFACRICGAKFQSRKLTRQHVLKSHTSGKLFSCNRCERKFRQLVNLETHVSIHTGEKPFACDYCNFRCRQPGALKRHLLIHTGEKPFACDRCEYKCREPSKLKQHKLIHTDEKPYACDLCDYKCRLLGNLKEHLLKHTGEQPFSCGVCDYKCRQPGSLKKHLLIHTDEKHYRCYVCSYECNEVADLKVHFLTHDEKPYKCERCEFAAATPELLKGHIRVHVDEKSYKRKRLQKFHPTTERKFLDEKGFACRICGSKFKKRKLMRQHVLASHTSGKMFSCNLCEHKTVHRGNFEAHMLTHTGDKPFSCDYCDYKCRQSSALKRHMLIHTGEKPFSCDHCHYKCRDRGALTRHMSIHSDEKPFSCDLCDYKGRERRGLSRHKLTHILIPESGKLPGGKNEQLLTHTGEKLFKCDHCEHTTKLFGSLKRHLLVHTDERPFKCKLCDYAARRSEHLKSHVLTHTDDAPFECTLCSYKGKTLKRLRLHMCRHKDALTRHTLIHTGEMPFKCELCDYKGRYPGRFKEHVLTHIAERRYKCTVCNYSAKFPRILNKSSEVSTNDAAAAVAVQSSSENQPQEPKRQYRYSCKFCNYATNYSGHLKYHVYTHTGEKPYVCLVCDRRFNQPYNLEQHQRTHTGAKPFQCEICGASFRQAHHVRDHMSKHTNETPYVCETCGAKFKRAEYLQRHMPRHTGEKPFECSVCSAKFARNSSLQQHLLSHSDERPFQCMLCDRRFKSQKTLKWHVESHTGMKRYKCDWCICKFRLKYQLRRHLVAHGEGEGRLKCFDCAFGLDSAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00466591;
90% Identity: iTF_00466591;
80% Identity: iTF_00465640;