Basic Information

Insect: Diorhabda carinata
Gene Symbol: Zfpm1
Assembly: GCA_029229535.1
Location: CM055254.1:37656083-37660771[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4.3 4e+02 2.3 0.1 2 23 7 28 6 28 0.91

2 15 0.0068 0.62 11.1 1.3 1 23 538 561 538 561 0.89

3 15 0.021 1.9 9.6 1.2 3 23 640 661 639 661 0.94

4 15 0.0019 0.17 12.9 1.8 1 23 669 691 669 691 0.98

5 15 0.00042 0.038 14.9 4.0 2 23 694 715 693 715 0.97

6 15 0.027 2.4 9.3 2.5 1 23 721 743 721 743 0.81

7 15 6.8e-05 0.0062 17.4 5.5 2 23 750 771 749 772 0.95

8 15 0.54 49 5.2 2.8 5 23 785 803 784 803 0.96

9 15 0.0022 0.2 12.7 2.6 3 23 810 831 809 831 0.97

10 15 0.28 26 6.0 0.1 2 23 847 867 846 867 0.96

11 15 0.00026 0.023 15.6 1.6 1 20 873 892 873 895 0.92

12 15 7.9e-05 0.0072 17.2 0.2 1 23 903 925 903 925 0.99

13 15 0.002 0.19 12.8 3.2 1 23 931 953 931 953 0.97

14 15 4.5e-07 4.1e-05 24.3 3.6 1 23 959 981 959 981 0.98

15 15 0.00082 0.075 14.0 7.0 1 23 987 1009 987 1010 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4.3	4e+02	2.3	0.1	2	23	7	28	6	28	0.91
2	15	0.0068	0.62	11.1	1.3	1	23	538	561	538	561	0.89
3	15	0.021	1.9	9.6	1.2	3	23	640	661	639	661	0.94
4	15	0.0019	0.17	12.9	1.8	1	23	669	691	669	691	0.98
5	15	0.00042	0.038	14.9	4.0	2	23	694	715	693	715	0.97
6	15	0.027	2.4	9.3	2.5	1	23	721	743	721	743	0.81
7	15	6.8e-05	0.0062	17.4	5.5	2	23	750	771	749	772	0.95
8	15	0.54	49	5.2	2.8	5	23	785	803	784	803	0.96
9	15	0.0022	0.2	12.7	2.6	3	23	810	831	809	831	0.97
10	15	0.28	26	6.0	0.1	2	23	847	867	846	867	0.96
11	15	0.00026	0.023	15.6	1.6	1	20	873	892	873	895	0.92
12	15	7.9e-05	0.0072	17.2	0.2	1	23	903	925	903	925	0.99
13	15	0.002	0.19	12.8	3.2	1	23	931	953	931	953	0.97
14	15	4.5e-07	4.1e-05	24.3	3.6	1	23	959	981	959	981	0.98
15	15	0.00082	0.075	14.0	7.0	1	23	987	1009	987	1010	0.96

Sequence Information

Coding Sequence: atggATTCAATTAATATAGTCTGTCCAGTGTGTACTCTGTATTTAAGACCAGGCATAACTTTGAAACAGCATTTGACATCTCATCCCAAGCAAAAAGTCATAGAAGCTTTAGTAAAGTTGTCAGGCACAGAAGATGAGCCTAAAGTACAGCAAAATACCACATCTGTACCTATTACACCACAGGTACAACCTGCAGGAACCAGCCAGGTAAATTCAACTATAGTGAACCAATCATGGAATCAGCCAGCACCTGTTCAAGTGGGGTCTCCTTCTAATGCAAACCCATTACATGGAAAccatgtttttatttatcaacaaaGTATGAGTACTACTTCCCCCCAACCAAATGTCTTACAAGTAAATCATCCATTATCTCAACAATATGTTTACCACCCAGCCATTTTCAATCCTCAAATGATGCCATATGTATATCAACAACAACAAGTTATTTTGTCTAGTAATTCATTACACCCACAAGTCAGAGCATTGCCTTTGGAACCACCCACTAGTAATTCCGAAATTCAACCAGAAGCAGTTGTTCCTGAAACTCATAATGACAAAGAGAATAATAGTGAGGCAAGAAAAGAGAGTATTGATTTAACTGTAAAAGAAGCAGTAAATGAACCTATCTCACAAGTACTAACCAAAGAAGATATTGAGGGTTTACATCATGAACTTGACATCAAAACTATAAAACACTTTGAAGAAGATCAATCACAAGCAAACGATATACCTCCAGAGGAATTTCAGGAAGTGGAAAGTGGAAGTGAGGAAGAATGTAATCAAGAATCCGAAAATCTAGATAGAGAAGATCTTGGAGAAGCTTTCAATTCTTCCAATCATACAGATTGGAAGACCGATTCAGAATTGAGTAAAGCTTGTCAAACACAAAATGGAATTAGCACTTCTCCTGAGCCCCAGATTGAAACAGGAACACAACAACCAAGCTATGTGAATCAACTTGAATATTTCTATCCTCCAAATAATGATTATCCTGAAAACTTCCATCATGAAGAAAGCAATAATGTATCTATGCCATTTACTACCAACCAAAAAGAAAGTTATGAGCAATCTGAACCTATTTATACTTCTGCAAATATATTACATGGAAATGACATTGATTTTGTTAATTTGGAAGATATTGTCTTGATAGGTGATTTTACTACTAATGGAGTACCTTCTCAAGTCGAGCATTTTGAACATACAATACAAGATAGACCCGGAGTATTGATGACCATAGGTGACATTCCAGAGCCGCAGAAAGTTGAGTATCAAGAGCATAGAGACTTTGAAGAAAGCATGTCAAGAGGAAGTTCCCATGTTAATATAAGAGCTGATGAAAAAATGCCAGCTAGAGGTGAACTATCAGGACAAGAAAGTATAGGAGGTAATAGTGATATAACTTGGAATAGATTGCAGTATCAAGAGGGAAGTTCTCGTATGTCCCATTCCTATGAAATGATAGGAAGAGAAACTTGGGAACAATCAGAGAGTGAAAGTGTATATAATACTATGGTAAAGAGGCAAAATTCAACACAAGTATCTTGTGAACACAATGATTATGATAATGATGTTCCAACAATAATAAGTTACATTGGTCCAAGTTTGAATTTCAAATGTTCTACTTGTGGTGAAAGTTTTGAATCTTCTAAAGACAGAAGTCAGCACGAATCAGAAAAGCATCCAGAGAAAGCAAGGAAGAATAAAATAGGAAGTGAAATTGGTAAAAAGTCTGTGAAAAAGTTGATCATCAAACCTAAAACTGAAAAGCCTAAAGAAGAACctaattttgataatgtatttACCAACAAATTTAAACAGGAGAATCCTACTGAGACCCAGACTGATATAGTTGCTTTAGAATCCACAGTTAAAATGGACGACGAGCCACTGCAACttccaaaaattaaaacctTATGTTCATTATGTGATTGTGTATTTGATAATGTGAAAAGTCTCAGACAGCATCGGTTAGAGGTTCATAAAGATCATACTGGAATTAGGCATAAATGTCTTACTTGTGGAGAATATTTCCCTACTGAGTATACATATACGGATCATTTGAAGATACATCCATTGGAATGTAGGCTCTGTGGGAAATTATTTTACCGAAGACACAATATGAAGTTACATATGAAGAGACATTTGGGCTTGAAGCCATACAAGTGTGACTTGTGCGATAAATCGTTTGTTACCAGACAGAAGCATGATGAGCACAAGAACGTTCATACGGGTGATGCTCCAATAAAATGCAACCTTTGTGACGAAAAATTCAGAAGACATTCCAATTTGGTCCAGCACCGCAACCGACATCACTTCCAACTAAAGAAGAAAGTCAAAGATTACATCTGTCATTGCGGTGAAATTTTCCACTCTAAGAAAAAACTGGCCTGGCACAAGGAAATCCACGATCCAAAGCCGAAAGCGTGTAGCCAATGCAATGAGAAGTTCCTACACATGTCAAGTCTAACTAGGCATATGCGACGAGCCCACAACGACAAGTTTCTTCCTGAAGAAAATAGACAGAACGAAAATGTAGAATGCCCAATTTGTAAGGGAGTTTATTTGAAGTCTTCTCTGGATGTACATATAAAGAATCACAGCGGGACTAGACCTTACACGTGTTTAATGTGTAACAAAGACTTTACGACAAAGTGGAATCTCAAGTTGCATAAATGGACGCATGCTAGTAGGACGACGAAACCGTACAAGTGCGATCAATGTAAAGGAGCTTTTATAAGGGAATCCGATTACATAGCTCACATGAATTCGCATAAAAGTGTACGACCCTACACTTGTAATTATTGCGGAGCccaatttattagaaaatataactGTCTTCGACACGTTAAGGAACACGAGAATGATAAGACATTTAGTTGTACAGTATGTGGTAAGTCGTTTCACCGATCGTATTATCTAAAAGATCATATGCGTGTACATAGCGGTGTTAGACCATATACATGTCATATATGCGGAAAAACTAGTAGTACTAAGTCTAATCATAACAAACACGTACAAATTCATCATGCGCGAGAACCTGTTAGTACAGAAAATTAA
Protein Sequence: MDSINIVCPVCTLYLRPGITLKQHLTSHPKQKVIEALVKLSGTEDEPKVQQNTTSVPITPQVQPAGTSQVNSTIVNQSWNQPAPVQVGSPSNANPLHGNHVFIYQQSMSTTSPQPNVLQVNHPLSQQYVYHPAIFNPQMMPYVYQQQQVILSSNSLHPQVRALPLEPPTSNSEIQPEAVVPETHNDKENNSEARKESIDLTVKEAVNEPISQVLTKEDIEGLHHELDIKTIKHFEEDQSQANDIPPEEFQEVESGSEEECNQESENLDREDLGEAFNSSNHTDWKTDSELSKACQTQNGISTSPEPQIETGTQQPSYVNQLEYFYPPNNDYPENFHHEESNNVSMPFTTNQKESYEQSEPIYTSANILHGNDIDFVNLEDIVLIGDFTTNGVPSQVEHFEHTIQDRPGVLMTIGDIPEPQKVEYQEHRDFEESMSRGSSHVNIRADEKMPARGELSGQESIGGNSDITWNRLQYQEGSSRMSHSYEMIGRETWEQSESESVYNTMVKRQNSTQVSCEHNDYDNDVPTIISYIGPSLNFKCSTCGESFESSKDRSQHESEKHPEKARKNKIGSEIGKKSVKKLIIKPKTEKPKEEPNFDNVFTNKFKQENPTETQTDIVALESTVKMDDEPLQLPKIKTLCSLCDCVFDNVKSLRQHRLEVHKDHTGIRHKCLTCGEYFPTEYTYTDHLKIHPLECRLCGKLFYRRHNMKLHMKRHLGLKPYKCDLCDKSFVTRQKHDEHKNVHTGDAPIKCNLCDEKFRRHSNLVQHRNRHHFQLKKKVKDYICHCGEIFHSKKKLAWHKEIHDPKPKACSQCNEKFLHMSSLTRHMRRAHNDKFLPEENRQNENVECPICKGVYLKSSLDVHIKNHSGTRPYTCLMCNKDFTTKWNLKLHKWTHASRTTKPYKCDQCKGAFIRESDYIAHMNSHKSVRPYTCNYCGAQFIRKYNCLRHVKEHENDKTFSCTVCGKSFHRSYYLKDHMRVHSGVRPYTCHICGKTSSTKSNHNKHVQIHHAREPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00911364; iTF_00736087; iTF_01106650;
90% Identity: -
80% Identity: -