Basic Information

Insect: Ophraella communa
Gene Symbol: Zfpm1
Assembly: GCA_035357415.1
Location: CM068991.1:2809336-2838364[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.5 1.3e+03 2.6 0.3 2 23 7 28 6 28 0.91

2 15 0.0098 3.6 10.6 1.9 1 21 540 560 540 563 0.88

3 15 0.79 2.9e+02 4.6 0.9 3 23 638 659 637 659 0.94

4 15 0.0013 0.48 13.4 1.0 1 23 667 689 667 689 0.98

5 15 0.00041 0.15 14.9 4.0 2 23 692 713 691 713 0.97

6 15 0.026 9.5 9.3 2.5 1 23 719 741 719 741 0.81

7 15 6.7e-05 0.024 17.4 5.5 2 23 748 769 747 770 0.95

8 15 0.53 1.9e+02 5.2 2.8 5 23 783 801 782 801 0.96

9 15 0.0055 2 11.4 2.5 3 23 808 829 807 829 0.97

10 15 0.14 50 7.0 0.1 2 23 845 865 844 865 0.95

11 15 0.00025 0.092 15.6 1.6 1 20 871 890 871 893 0.92

12 15 0.00013 0.049 16.5 0.2 1 23 901 923 901 923 0.99

13 15 0.002 0.73 12.8 3.2 1 23 929 951 929 951 0.97

14 15 4.4e-07 0.00016 24.3 3.6 1 23 957 979 957 979 0.98

15 15 0.00093 0.34 13.8 7.2 1 23 985 1007 985 1008 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.5	1.3e+03	2.6	0.3	2	23	7	28	6	28	0.91
2	15	0.0098	3.6	10.6	1.9	1	21	540	560	540	563	0.88
3	15	0.79	2.9e+02	4.6	0.9	3	23	638	659	637	659	0.94
4	15	0.0013	0.48	13.4	1.0	1	23	667	689	667	689	0.98
5	15	0.00041	0.15	14.9	4.0	2	23	692	713	691	713	0.97
6	15	0.026	9.5	9.3	2.5	1	23	719	741	719	741	0.81
7	15	6.7e-05	0.024	17.4	5.5	2	23	748	769	747	770	0.95
8	15	0.53	1.9e+02	5.2	2.8	5	23	783	801	782	801	0.96
9	15	0.0055	2	11.4	2.5	3	23	808	829	807	829	0.97
10	15	0.14	50	7.0	0.1	2	23	845	865	844	865	0.95
11	15	0.00025	0.092	15.6	1.6	1	20	871	890	871	893	0.92
12	15	0.00013	0.049	16.5	0.2	1	23	901	923	901	923	0.99
13	15	0.002	0.73	12.8	3.2	1	23	929	951	929	951	0.97
14	15	4.4e-07	0.00016	24.3	3.6	1	23	957	979	957	979	0.98
15	15	0.00093	0.34	13.8	7.2	1	23	985	1007	985	1008	0.96

Sequence Information

Coding Sequence: ATGGATTCAACTAACATAGTTTGTCCAGTGTGTACCTTATATTTGAGACCAGGCATTACTTTGAAACATCATCTAACTTCTCATCCTAAACAGAAGGTCATAGAAGCACTAGTAAAACTATCAGGTATAGAAGATCAGCCTAAAATTCAGTCAAGCCCTACAACAGTACCTGTTACCCCACAGATACAAACTGCAGGAACCAGCCAGgTAAATTCAACAATAGTGAATCAATCATGGAATCAGCCAGCACCTGTTCAAGTGGGGTCTCCCTCAAGTGTAAATCCTTTACATGGCAATcatgtttttatttatcaacAAAGCATGAGTACTACATCACCTCAACCAAACGTCTTACAAGTAAATCATCCGCTATCTCAACAATACGTCTATCACCCAGCTATTTTCAATCCCCAAATGATGCCATATGTATATCAACAACAACAGGTCATTTTATCTAGTAATTCATTACACCCACAAGTCAGAGCATTACCTTTTGAACCACCTAATAGCGATTCTGAGATTCAGTCGGGAGTTGTTATAACAGAAAATGATAATCTTAAAGAAAGCAACAGTAGTGAGGCAAGAAAAGAGAGTATCGATTTGACTGTAGAAGACACAATAGAAAAACCCGCCCCACAAAAATTAACCAAAGAAGATGTTGAAGGTCTACATGATGAAGTTGACATTAAAACTATAGAAGACTTTGAAGAAGAGCAGTTACAAGCAAATGACATACCACCAGAGGAGTTCAGAGAAGAAAGCGAAAGCGATGAGGAATGTAATGAAGaaacagaaaatttaaataggGAAGAAACTGTAGATTCTACTCATTCTCAACAAGAAGACTGGAAGGATGATTCGGAATTGAGTAAAGCTTGCCAAACACAAACTGCAATCAACACTTTCCCTGAGCCTCAAATTGAAACAGAAATGAACCAGCCTCCTTATGTCCCAGTAGATCAACCAGAATATTTCTATCTAAGAACTCAAAATAATTATCCAGATAACTTTCACCAAGGACCTAGTAATAGTGTTTCAGAGTCGTTTACTTCAAATCACAAAGAAAACGAAACTTATGAGCAATCTGAACCTATTTACACATCAGCAAATATTTTACATGGGAATGATCATcttgattttgttaatttagATGATATTGTCATAATTGGTGATTTTACTACCAATGCAGTTGCTTCCCAAGTAGAAAATTTCGATCAAACAATCCAAGACAGACCTGGGGTGTTAATGACCATAGGGGATATTCCAGAACAGCAAAAGATGGATTATCAAGAACATAGAGATTTTGAAGAAAGTATGTCCAGAGGTAGTTCCCACGTTAATATACGAGCTGATGAGAAAATGCCAGCGAGAGGAGAATTGTCAGGTCAAGAAAGTATTGGAGGTAGTAGTGATATTACTTGGAACCGGTTGCAGTATCAAGAAAGCATGTCTCACTCGTATGAAATGATCGGAAGGGAATCTTGGGAGCATTCGGACAGCGAAAGCGCGGATGCTTCTATGGTAAAGAGACAAAATGCGACGCAAGTATCTTGCGAACGTAGCGATTATGAAAACGACGTACCGACTATAATAAGCTACATCGGTCCGCGTTTGAATTTTAAGTGTTCTACTTGCGGCGAAAGTTTCGAATCTTCTAAGCATAGGAGCGAACACGAGGCAGAAAAACACCCGAAGAAAGCCATAGGGTGCGATATCGGCAAAAAACCCGTCAAAAAATTAATCATCAAACCCAAATCCGAAAAGCCTAAAGAGGAACCCAATTTCGATAACGTTTTCACCAACAAATTCAAATTGGAAAATCCCATTGAGACGCAGACTGATCTCGTAGCTTTAGAAAGCGCCGTTAAAGTAGACGATGTTCCGTTGCAACTCCCGAAAATTAAGACTTTGTGCTCGTTGTGCGATTGCGTATTAGATAGCGTGAAGAGTCTCAGACAGCACCGGTTAGAGGTGCACAAAGATCATACGGGCATTAGGCATAAATGTCTGACTTGTGGGGAATATTTTCCCACGGAGTACGCCTATACGGATCATCTGAAGATACATCCGTTGGAATGTAGGCTCTGTGGGAAGTTGTTCTATAGGAGACATAACATGAAGTTACATATGAAAAGGCATTTGGGTTTGAAACCTTACAAGTGTGACTTGTGCGATAAGTCGTTTGTTACCAGACAGAAGCACGATGAACATAAGAACGTTCATACTgGCGACGCCCCCATAAAGTGCAACCTTTGCGACGAGAAATTCAGGCGACATTCCAATCTGGTCCAGCACCGTAACAGACACCACTTCCAACTGAAGAAAAAAGTGAAAGATTACATCTGTCATTGCGGCGAGATCTTCCATTCGAAGAAAAAATTGGCCTGGCACAAGGAGATCCACGATGCCAAACCGAAAGCGTGCAGCCAATGCAGCGAGAAGTTTCTGCACATGTCGAGTCTGACGCGTCACATGCGTCGCGCGCACAACGACAAATTTCTCCCCGAAGAGAACAGACAGAACGAAAACGTGGAATGTCCCATCTGCAAGGGTATCTACTTGAAGTCTTCGTTGGAGGTGCACATCAAGAACCACAGCGGTACGAGGCCTTACACTTGTCTGATGTGCAACAAGGACTTCACCACCAAGTGGAACTTGAAGTTGCACAAGTGGACGCACGCCAGCAGGACGACGAAGCCCTACAAGTGCGACCAATGCAAAGGGGCTTTTATCAGAGAGTCGGATTACGTTGCCCACATGAACTCGCACAAGAGCGTTCGACCGTACACTTGTAATTACTGCGGGGCACAGTTTATCAGGAAATACAATTGTCTTCGACACGTCAAGGAGCACGAGAACGATAAGACGTTTAGTTGTACGGTATGCGGTAAGTCTTTCCATCGATCGTACTATTTGAAAGATCACATGCGAGTGCATAGTGGAGTTAGGCCGTATACCTGTCACATATGCGGGAAAACTAGTACGACGAAATCTAATCATAATAAACACGTACAAATTCATCATGCGCGAGAACCGGTCAGTACGGAAAATTAA
Protein Sequence: MDSTNIVCPVCTLYLRPGITLKHHLTSHPKQKVIEALVKLSGIEDQPKIQSSPTTVPVTPQIQTAGTSQVNSTIVNQSWNQPAPVQVGSPSSVNPLHGNHVFIYQQSMSTTSPQPNVLQVNHPLSQQYVYHPAIFNPQMMPYVYQQQQVILSSNSLHPQVRALPFEPPNSDSEIQSGVVITENDNLKESNSSEARKESIDLTVEDTIEKPAPQKLTKEDVEGLHDEVDIKTIEDFEEEQLQANDIPPEEFREESESDEECNEETENLNREETVDSTHSQQEDWKDDSELSKACQTQTAINTFPEPQIETEMNQPPYVPVDQPEYFYLRTQNNYPDNFHQGPSNSVSESFTSNHKENETYEQSEPIYTSANILHGNDHLDFVNLDDIVIIGDFTTNAVASQVENFDQTIQDRPGVLMTIGDIPEQQKMDYQEHRDFEESMSRGSSHVNIRADEKMPARGELSGQESIGGSSDITWNRLQYQESMSHSYEMIGRESWEHSDSESADASMVKRQNATQVSCERSDYENDVPTIISYIGPRLNFKCSTCGESFESSKHRSEHEAEKHPKKAIGCDIGKKPVKKLIIKPKSEKPKEEPNFDNVFTNKFKLENPIETQTDLVALESAVKVDDVPLQLPKIKTLCSLCDCVLDSVKSLRQHRLEVHKDHTGIRHKCLTCGEYFPTEYAYTDHLKIHPLECRLCGKLFYRRHNMKLHMKRHLGLKPYKCDLCDKSFVTRQKHDEHKNVHTGDAPIKCNLCDEKFRRHSNLVQHRNRHHFQLKKKVKDYICHCGEIFHSKKKLAWHKEIHDAKPKACSQCSEKFLHMSSLTRHMRRAHNDKFLPEENRQNENVECPICKGIYLKSSLEVHIKNHSGTRPYTCLMCNKDFTTKWNLKLHKWTHASRTTKPYKCDQCKGAFIRESDYVAHMNSHKSVRPYTCNYCGAQFIRKYNCLRHVKEHENDKTFSCTVCGKSFHRSYYLKDHMRVHSGVRPYTCHICGKTSTTKSNHNKHVQIHHAREPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00459218;
90% Identity: -
80% Identity: -